Zobrazeno 1 - 8
of 8
pro vyhledávání: '"Elisa Oberbeckmann"'
Autor:
Elisa Oberbeckmann, Nils Krietenstein, Vanessa Niebauer, Yingfei Wang, Kevin Schall, Manuela Moldt, Tobias Straub, Remo Rohs, Karl-Peter Hopfner, Philipp Korber, Sebastian Eustermann
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-19 (2021)
DNA sequence preferences or statistical positioning of histones has not explained genomic patterns of nucleosome organisation in vivo. Here, the authors establish DNA shape/mechanics as key elements that have evolved together with binding sites of DN
Externí odkaz:
https://doaj.org/article/bbe5da9e664a4906b57c14cdaabf9842
Autor:
Elisa Oberbeckmann, Vanessa Niebauer, Shinya Watanabe, Lucas Farnung, Manuela Moldt, Andrea Schmid, Patrick Cramer, Craig L. Peterson, Sebastian Eustermann, Karl-Peter Hopfner, Philipp Korber
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-17 (2021)
Although chromatin remodelers have been shown to align nucleosome arrays to barriers and to generate spacing regularity among nucleosomes within arrays, it has remained unclear how the distance to barrier and the spacing length are determined in abso
Externí odkaz:
https://doaj.org/article/418cacd9f9d84571a8bd52e134e760d6
The spatial organization of the genome modulates nuclear processes, including transcription, replication, and DNA repair1,2. Eukaryotic genomes are organized into distinct 3D chromatin domains3. However, the molecular mechanisms that drive the format
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::924b2e78969629f2d371a366180fcf37
https://doi.org/10.1101/2023.02.27.530214
https://doi.org/10.1101/2023.02.27.530214
Autor:
Elisa Oberbeckmann, Michael Roland Wolff, Nils Krietenstein, Mark Heron, Andrea Schmid, Tobias Straub, Ulrich Gerland, Philipp Korber
Publikováno v:
Chromatin Accessibility ISBN: 9781071628980
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c1979565a74d6096ea7a09302114e426
https://doi.org/10.1007/978-1-0716-2899-7_9
https://doi.org/10.1007/978-1-0716-2899-7_9
Autor:
Philipp Korber, Mark Heron, Nils Krietenstein, Helmut Blum, Stefan Krebs, Jessica L Ellins, Andrea Schmid, Elisa Oberbeckmann, Michael Roland Wolff, Ulrich Gerland
Publikováno v:
Genome Research. 29:1996-2009
Mapping of nucleosomes, the basic DNA packaging unit in eukaryotes, is fundamental for understanding genome regulation because nucleosomes modulate DNA access by their positioning along the genome. A cell-population nucleosome map requires two observ
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::642fe7d2add74f472b3c2738cd850fdc
https://doi.org/10.1101/gr.253419.119
https://doi.org/10.1101/gr.253419.119
Autor:
Elisa, Oberbeckmann, Michael, Wolff, Nils, Krietenstein, Mark, Heron, Jessica L, Ellins, Andrea, Schmid, Stefan, Krebs, Helmut, Blum, Ulrich, Gerland, Philipp, Korber
Publikováno v:
Genome Res
Mapping of nucleosomes, the basic DNA packaging unit in eukaryotes, is fundamental for understanding genome regulation because nucleosomes modulate DNA access by their positioning along the genome. A cell-population nucleosome map requires two observ
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::945f059f3cab72e50595b76c85e48386
https://pubmed.ncbi.nlm.nih.gov/31694866
https://pubmed.ncbi.nlm.nih.gov/31694866
Autor:
Alessandro Tosi, Philipp Korber, Marianne Schwarz, Gabriele Stoehr, Karl-Peter Hopfner, Sebastian Eustermann, Kevin Schall, Vanessa Niebauer, Kilian R. Knoll, Elisa Oberbeckmann, Andrea Buchfellner
Publikováno v:
Nature structuralmolecular biology. 25(9)
Nuclear actin (N-actin) and actin-related proteins (Arps) are critical components of several chromatin modulating complexes, including the chromatin remodeler INO80, but their function is largely elusive. Here, we report the crystal structure of the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::35c17426a1c6347d40715bc338774fa4
https://pubmed.ncbi.nlm.nih.gov/30177756
https://pubmed.ncbi.nlm.nih.gov/30177756
Autor:
Craig L. Peterson, Sebastian Eustermann, Andrea Schmid, Vanessa Niebauer, Philipp Korber, Manuela Moldt, Patrick Cramer, Elisa Oberbeckmann, Lucas Farnung, Shinya Watanabe, Karl-Peter Hopfner
Publikováno v:
Nature Communications
bioRxiv
Nature Communications, Vol 12, Iss 1, Pp 1-17 (2021)
bioRxiv
Nature Communications, Vol 12, Iss 1, Pp 1-17 (2021)
Arrays of regularly spaced nucleosomes dominate chromatin and are often phased by alignment to reference sites like active promoters. How the distances between nucleosomes (spacing), and between phasing sites and nucleosomes are determined remains un
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bf5743dfc44ba7b01c50320845adcabc