Zobrazeno 1 - 9
of 9
pro vyhledávání: '"Electra Tapanari"'
Autor:
Julien Lagarde, Barbara Uszczynska-Ratajczak, Javier Santoyo-Lopez, Jose Manuel Gonzalez, Electra Tapanari, Jonathan M. Mudge, Charles A. Steward, Laurens Wilming, Andrea Tanzer, Cédric Howald, Jacqueline Chrast, Alicia Vela-Boza, Antonio Rueda, Francisco J. Lopez-Domingo, Joaquin Dopazo, Alexandre Reymond, Roderic Guigó, Jennifer Harrow
Publikováno v:
Nature Communications, Vol 7, Iss 1, Pp 1-11 (2016)
Long non-coding RNAs are increasingly recognised to be important factors in regulating cellular processes and comprise a large faction of the transcriptome, however most are uncharacterised. Here the authors present RACE-Seq, a tool to improve and ex
Externí odkaz:
https://doaj.org/article/4bde9d48e3b14a859a3989164764bb06
Autor:
Charles A, Steward, Jolien, Roovers, Marie-Marthe, Suner, Jose M, Gonzalez, Barbara, Uszczynska-Ratajczak, Dmitri, Pervouchine, Stephen, Fitzgerald, Margarida, Viola, Hannah, Stamberger, Fadi F, Hamdan, Berten, Ceulemans, Patricia, Leroy, Caroline, Nava, Anne, Lepine, Electra, Tapanari, Don, Keiller, Stephen, Abbs, Alba, Sanchis-Juan, Detelina, Grozeva, Anthony S, Rogers, Mark, Diekhans, Roderic, Guigó, Robert, Petryszak, Berge A, Minassian, Gianpiero, Cavalleri, Dimitrios, Vitsios, Slavé, Petrovski, Jennifer, Harrow, Paul, Flicek, F, Lucy Raymond, Nicholas J, Lench, Peter De, Jonghe, Jonathan M, Mudge, Sarah, Weckhuysen, Sanjay M, Sisodiya, Adam, Frankish
Publikováno v:
NPJ Genomic Medicine
The developmental and epileptic encephalopathies (DEE) are a group of rare, severe neurodevelopmental disorders, where even the most thorough sequencing studies leave 60–65% of patients without a molecular diagnosis. Here, we explore the incomplete
Autor:
Stephen Abbs, Caroline Nava, Sanjay M. Sisodiya, Jyoti S. Choudhary, Dimitrios Vitsios, Dmitri D. Pervouchine, Electra Tapanari, Fadi F. Hamdan, Hannah Stamberger, Berten Ceulemans, Detelina Grozeva, Jennifer Harrow, Patricia Leroy, Marie Marthe Suner, Charles A. Steward, Gianpiero L. Cavalleri, Margarida Viola, Anne Fabienne Lepine, José M. González, Mark Diekhans, Barbara Uszczynska-Ratajczak, Paul Flicek, Nicholas Lench, F. Lucy Raymond, Adam Frankish, Robert Petryszak, Stephen Fitzgerald, Sarah Weckhuysen, Alba Sanchis-Juan, James C. Wright, Peter De Jonghe, Roderic Guigó, Anthony Rogers, Slavé Petrovski, Don Keiller, Jonathan M. Mudge, Jolien Roovers, Berge A. Minassian
The early infantile epileptic encephalopathies (EIEE) are a group of rare, severe neurodevelopmental disorders, where even the most thorough sequencing studies leave 60-65% of patients without a molecular diagnosis. Here, we explore the incompletenes
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b19da24628aeae9fad19e53f09c9ec01
Autor:
Stephen Abbs, Dimitrios Vitsios, Dmitri D. Pervouchine, Paul Flicek, Hannah Stamberger, Roderic Guigó, Barbara Uszczynska-Ratajczak, F. Lucy Raymond, Margarida Viola, Jennifer Harrow, Adam Frankish, Robert Petryszak, Sarah Weckhuysen, Alba Sanchis-Juan, Caroline Nava, Electra Tapanari, José M. González, Anthony Rogers, Slavé Petrovski, Anne Fabienne Lepine, Patricia Leroy, Detelina Grozeva, Marie Marthe Suner, Mark Diekhans, Gianpiero L. Cavalleri, Don Keiller, Berten Ceulemans, Nicholas Lench, Jonathan M. Mudge, Jolien Roovers, Stephen Fitzgerald, Berge A. Minassian, Charles A. Steward, Peter De Jonghe, Sanjay M. Sisodiya, Fadi F. Hamdan
Publikováno v:
Npj genomic medicine
npj Genomic Medicine, Vol 4, Iss 1, Pp 1-11 (2019)
Recercat. Dipósit de la Recerca de Catalunya
instname
npj Genomic Medicine, Vol 4, Iss 1, Pp 1-11 (2019)
Recercat. Dipósit de la Recerca de Catalunya
instname
The developmental and epileptic encephalopathies (DEE) are a group of rare, severe neurodevelopmental disorders, where even the most thorough sequencing studies leave 60–65% of patients without a molecular diagnosis. Here, we explore the incomplete
Autor:
Lincoln D. Stein, Pankaj Jaiswal, Dan Bolser, Parul Gupta, Guy Naamati, Sunita Kumari, Crispin B. Taylor, Kapeel Chougule, Antonio Fabregat, Nuno A. Fonseca, Alfonso Muñoz-Pomer Fuentes, Joseph Mulvaney, James Thomason, Noor Al-Bader, Yinping Jiao, Robert Petryszak, Electra Tapanari, Y. Amy Tang, Paul J. Kersey, Justin Preece, Matthew Geniza, Haider Iqbal, Patti Lockhart, Bo Wang, Young Koung Lee, Doreen Ware, Sushma Naithani, Peter D'Eustachio, Laura Huerta, Vivek Kumar, Sharon Wei, Justin Elser, Marcela K. Tello-Ruiz, Irene Papatheodorou, Andrew Olson, Maria Keays, Joel Weiser, Michael S. Campbell, Joshua C. Stein
Publikováno v:
Nucleic Acids Research
Gramene (http://www.gramene.org) is a knowledgebase for comparative functional analysis in major crops and model plant species. The current release, #54, includes over 1.7 million genes from 44 reference genomes, most of which were organized into 62,
Autor:
Paul J. Kersey, Daniel M. Staines, Jay C. Humphrey, Bert Overduin, Julia Khobova, Doreen Ware, Paul Davis, Gareth Maslen, Emily Perry, Kevin L. Howe, Electra Tapanari, Bruce J. Bolt, Sharon Wei, Michael Nuhn, Joshua C. Stein, Ernesto Lowy, Naveen K. Aranganathan, Irina M. Armean, Brandon Walts, Mikkel B. Christensen, Giulietta Spudich, James E. Allen, Lee J. Falin, Marcela K. Tello-Ruiz, Gareth Williams, Christoph Grabmueller, Denise Carvalho-Silva, Mark D. McDowall, Daniel Lawson, Nicholas Langridge, Chuang Kee Ong, Uma Maheswari, Helder Pedro, Dan Bolser, Arnaud Kerhornou, Michael Paulini, Sanjay Boddu, Eugene Kulesha
Publikováno v:
Kersey, P J, Allen, J E, Armean, I, Boddu, S, Bolt, B J, Carvalho-Silva, D, Christensen, M, Davis, P, Falin, L J, Grabmueller, C, Humphrey, J, Kerhornou, A, Khobova, J, Aranganathan, N K, Langridge, N, Lowy, E, McDowall, M D, Maheswari, U, Nuhn, M, Ong, C K, Overduin, B, Paulini, M, Pedro, H, Perry, E, Spudich, G, Tapanari, E, Walts, B, Williams, G, Tello-Ruiz, M, Stein, J, Wei, S, Ware, D, Bolser, D M, Howe, K L, Kulesha, E, Lawson, D, Maslen, G & Staines, D M 2016, ' Ensembl Genomes 2016: more genomes, more complexity ', Nucleic Acids Research, vol. 44, no. D1, pp. D574-D580 . https://doi.org/10.1093/nar/gkv1209
Nucleic Acids Research
Nucleic Acids Research
Ensembl Genomes (http://www.ensemblgenomes.org) is an integrating resource for genome-scale data from non-vertebrate species, complementing the resources for vertebrate genomics developed in the context of the Ensembl project (http://www.ensembl.org)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::acb59e0810832af5a256c0085a4c49d1
https://hdl.handle.net/20.500.11820/ee35d4b0-0800-4328-860c-4ff20ba079a6
https://hdl.handle.net/20.500.11820/ee35d4b0-0800-4328-860c-4ff20ba079a6
Autor:
Electra Tapanari, Alicia Vela-Boza, Roderic Guigó, Andrea Tanzer, Antonio Rueda, Francisco J. López-Domingo, Javier Santoyo-Lopez, Julien Lagarde, Jonathan M. Mudge, Jacqueline Chrast, Joaquín Dopazo, Laurens G. Wilming, Jennifer Harrow, José M. González, Barbara Uszczynska-Ratajczak, Charles A. Steward, Cédric Howald, Alexandre Reymond
Publikováno v:
Nature Communications, vol. 7, pp. 12339
Lagarde, J, Uszczynska-Ratajczak, B, Santoyo-Lopez, J, Gonzalez, J M, Tapanari, E, Mudge, J M, Steward, C A, Wilming, L, Tanzer, A, Howald, C, Chrast, J, Vela-Boza, A, Rueda, A, Lopez-Domingo, F J, Dopazo, J, Reymond, A, Guigó, R & Harrow, J 2016, ' Extension of human lncRNA transcripts by RACE coupled with long-read high-throughput sequencing (RACE-Seq) ', Nature Communications, vol. 7, 12339 . https://doi.org/10.1038/ncomms12339
Nature Communications
r-CIPF: Repositorio Institucional Producción Científica del Centro de Investigación Principe Felipe (CIPF)
Centro de Investigación Principe Felipe (CIPF)
Nature Communications, Vol 7, Iss 1, Pp 1-11 (2016)
r-CIPF. Repositorio Institucional Producción Científica del Centro de Investigación Principe Felipe (CIPF)
instname
Lagarde, J, Uszczynska-Ratajczak, B, Santoyo-Lopez, J, Gonzalez, J M, Tapanari, E, Mudge, J M, Steward, C A, Wilming, L, Tanzer, A, Howald, C, Chrast, J, Vela-Boza, A, Rueda, A, Lopez-Domingo, F J, Dopazo, J, Reymond, A, Guigó, R & Harrow, J 2016, ' Extension of human lncRNA transcripts by RACE coupled with long-read high-throughput sequencing (RACE-Seq) ', Nature Communications, vol. 7, 12339 . https://doi.org/10.1038/ncomms12339
Nature Communications
r-CIPF: Repositorio Institucional Producción Científica del Centro de Investigación Principe Felipe (CIPF)
Centro de Investigación Principe Felipe (CIPF)
Nature Communications, Vol 7, Iss 1, Pp 1-11 (2016)
r-CIPF. Repositorio Institucional Producción Científica del Centro de Investigación Principe Felipe (CIPF)
instname
Long non-coding RNAs (lncRNAs) constitute a large, yet mostly uncharacterized fraction of the mammalian transcriptome. Such characterization requires a comprehensive, high-quality annotation of their gene structure and boundaries, which is currently
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bd034b7fc9beadcb14efe0dedb325e72
https://serval.unil.ch/notice/serval:BIB_C29EE3009EC0
https://serval.unil.ch/notice/serval:BIB_C29EE3009EC0
Autor:
Robert Altshuler, Laura Elnitski, Michael Anaya, Alec Victorsen, Deborah Winter, Javier Herrero, Katherine Varley, Andrea Sboner, Oscar Junhong Luo, Marco Mariotti, Cristina Sisu, Mike Kay, Timothy Dreszer, Jane Loveland, Alexandra Bignell, Ewan Birney, Tim @timjph Hubbard, Kuljeet Sandhu, Eric Haugen, Chris Gunter, Alexej Abyzov, Lucas Ward, Georgi Marinov, Michael Pazin, Thomas Gingeras, Alexander Dobin, Kimberly Foss, Xianjun Dong, Benoit Miotto, Piotr Mieczkowski, Cedric Notredame, Andrew Berry, Shawn Gillespie, Axel Visel, Shawn Levy, Richard Sandstrom, Jose M Gonzalez, Melissa Fullwood, Timo Lassmann, Michael Tress, Julien Lagarde, Kevin Yip, Leslie Adams, Sylvain Foissac, Bronwen Aken, Piero Carninci, Suganthi Balasubramanian, Andrea Tanzer, Sarah Djebali, Michael Hoffman, Gloria Despacio-Reyes, Peter Park, Felix Kokocinski, Katherine Fisher-Aylor, Juan M Vaquerizas, Peggy Farnham, Patrick Collins, Amonida Zadissa, Pedro Ferreira, Philippe Batut, Michael Snyder, Electra Tapanari, Adam Frankish, Paul Flicek, AMARTYA SANYAL, Tyler Alioto, Giovanni Bussotti, Laurence Meyer, Jingyi Jessica Li, Matthew Blow, Tristan FRUM, Roger Alexander, Rory Johnson, Charles Steward, Meizhen Zheng, Margus Lukk, Ross Hardison, Claire Davidson, Gary Saunders, Alan Boyle, Luiz Penalva, Rajinder Kaul, Lazaro Centanin, Florencia Pauli Behn, Thomas Derrien, Nathan Sheffield, Toby Hunt, Eric Nguyen, Jeff Vierstra, Konrad Karczewski, Kimberly Bell, Yanbao Yu, Hagen U Tilgner, James Taylor, Balázs Bánfai, Catherine Snow, Benjamin Vernot, Stephan Kirchmaier, Michael Sammeth, Steven Wilder, Angelika Merkel, Joanna Mieczkowska, Guoliang Li, Wei Lin, Jennifer Harrow, Thomas Oliver Auer, Daniel Barrell, Eddie Park, Alvis Brazma, Hazuki Takahashi, Nathan Johnson, Daniel Sobral, Terry Furey, Alexandre Reymond, Jonathan Mudge, Anshul Kundaje, Jose Rodriguez, Akshay Bhinge, James Gilbert, Jakub Karczewski, Venkat Malladi, Troy Whitfield, Orion Buske, Ian Dunham, Jennifer Moran, Joachim Wittbrodt, Charles B. Epstein, Laurens Wilming, Jason Gertz, Joshua Akey, Joel Rozowsky
Publikováno v:
Nature
Nature, Nature Publishing Group, 2012, 489 (7414), pp.57-74. ⟨10.1038/nature11247⟩
NATURE
Nature, Vol. 489, No 7414 (2012) pp. 57-74
PMC
Recercat. Dipósit de la Recerca de Catalunya
instname
Nature, Nature Publishing Group, 2012, 489 (7414), pp.57-74. ⟨10.1038/nature11247⟩
NATURE
Nature, Vol. 489, No 7414 (2012) pp. 57-74
PMC
Recercat. Dipósit de la Recerca de Catalunya
instname
The human genome encodes the blueprint of life, but the function of the vast majority of its nearly three billion bases is unknown. The Encyclopedia of DNA Elements (ENCODE) project has systematically mapped regions of transcription, transcription fa
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2b208801384684d0028cc28316677b0d
https://hal.archives-ouvertes.fr/hal-01217624
https://hal.archives-ouvertes.fr/hal-01217624
Autor:
Electra Tapanari, Veronika Boychenko, Jeena Rajan, Gary Saunders, Mark Gerstein, Michael F. Lin, Michael L. Tress, Mark Diekhans, Suganthi Balasubramanian, Daniel Barrell, If H. A. Barnes, Cédric Howald, Bronwen Aken, Nathalie Walters, Thomas Derrien, M. Kay, Felix Kokocinski, Adam Frankish, Alexandra Bignell, Jacqueline Chrast, Amonida Zadissa, Iakes Ezkurdia, Jose Manuel Rodriguez, Charles A. Steward, Baikang Pei, Andrea Tanzer, Roderic Guigó, Gloria Despacio-Reyes, Jennifer Harrow, Manolis Kellis, Michael R. Brent, Jeltje Van Baren, José M. González, Stephen M. J. Searle, Tim Hubbard, Alexandre Reymond, Alfonso Valencia, Rachel A. Harte, Gaurab Mukherjee, Toby Hunt, David Haussler
Publikováno v:
Recercat. Dipósit de la Recerca de Catalunya
instname
Genome Research, vol. 22, no. 9, pp. 1760-1774
Genome Research
instname
Genome Research, vol. 22, no. 9, pp. 1760-1774
Genome Research
The GENCODE Consortium aims to identify all gene features in the human genome using a combination of computational analysis, manual annotation, and experimental validation. Since the first public release of this annotation data set, few new protein-c
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::71ec03aa0c0c352d60a264e15dc47ccd
http://hdl.handle.net/10230/22636
http://hdl.handle.net/10230/22636