Zobrazeno 1 - 10
of 56
pro vyhledávání: '"Ekiert DC"'
Autor:
Brunette, TJ, Parmeggiani, F, Huang, PS, Bhabha, G, Ekiert, DC, Tsutakawa, SE, Hura, GL, Tainer, JA, Baker, D
Publikováno v:
Nature, vol 528, iss 7583
Brunette, TJ; Parmeggiani, F; Huang, PS; Bhabha, G; Ekiert, DC; Tsutakawa, SE; et al.(2015). Exploring the repeat protein universe through computational protein design. Nature, 528(7583), 580-584. doi: 10.1038/nature16162. Lawrence Berkeley National Laboratory: Lawrence Berkeley National Laboratory. Retrieved from: http://www.escholarship.org/uc/item/1pb2b52f
Brunette, TJ; Parmeggiani, F; Huang, PS; Bhabha, G; Ekiert, DC; Tsutakawa, SE; et al.(2015). Exploring the repeat protein universe through computational protein design. Nature, 528(7583), 580-584. doi: 10.1038/nature16162. Lawrence Berkeley National Laboratory: Lawrence Berkeley National Laboratory. Retrieved from: http://www.escholarship.org/uc/item/1pb2b52f
© 2015 Macmillan Publishers Limited. All rights reserved. A central question in protein evolution is the extent to which naturally occurring proteins sample the space of folded structures accessible to the polypeptide chain. Repeat proteins composed
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::bae418dc5b9ea176a6fbfc91abe3347f
https://escholarship.org/uc/item/1pb2b52f
https://escholarship.org/uc/item/1pb2b52f
Autor:
Antao NV; Department of Cell Biology, New York University School of Medicine, New York, NY, United States of America., Sall J; Office of Science and Research Microscopy Laboratory, New York University School of Medicine, New York, NY, United States of America., Petzold C; Office of Science and Research Microscopy Laboratory, New York University School of Medicine, New York, NY, United States of America., Ekiert DC; Department of Cell Biology, New York University School of Medicine, New York, NY, United States of America.; Department of Microbiology, New York University School of Medicine, New York, NY, United States of America., Bhabha G; Department of Cell Biology, New York University School of Medicine, New York, NY, United States of America., Liang FX; Department of Cell Biology, New York University School of Medicine, New York, NY, United States of America.; Office of Science and Research Microscopy Laboratory, New York University School of Medicine, New York, NY, United States of America.
Publikováno v:
PloS one [PLoS One] 2024 Aug 09; Vol. 19 (8), pp. e0301284. Date of Electronic Publication: 2024 Aug 09 (Print Publication: 2024).
Autor:
Edman NI; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA; Molecular and Cellular Biology Graduate Program, University of Washington, Seattle, WA 98195, USA; Medical Scientist Training Program, University of Washington, Seattle, WA 98195, USA., Phal A; Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98109, USA; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA., Redler RL; Department of Cell Biology, New York University School of Medicine, New York, NY 10016, USA., Schlichthaerle T; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Srivatsan SR; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA; Medical Scientist Training Program, University of Washington, Seattle, WA 98195, USA; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Ehnes DD; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98109, USA., Etemadi A; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA; Medical Biotechnology Department, School of Advanced Technologies in Medicine, Tehran University of Medical Sciences (TUMS), Tehran, Iran., An SJ; Department of Pharmacology, Yale University School of Medicine, New Haven, CT 06520, USA., Favor A; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Li Z; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Praetorius F; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Gordon M; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98109, USA., Vincent T; Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98109, USA; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA; Division of Nephrology, Department of Medicine, University of Washington School of Medicine, Seattle, WA 98109, USA., Marchiano S; Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98109, USA., Blakely L; Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98109, USA., Lin C; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Yang W; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Coventry B; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Hicks DR; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Cao L; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Bethel N; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA; Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA., Heine P; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Murray A; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Gerben S; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Carter L; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Miranda M; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Negahdari B; Medical Biotechnology Department, School of Advanced Technologies in Medicine, Tehran University of Medical Sciences (TUMS), Tehran, Iran., Lee S; Department of Pharmacology, Yale University School of Medicine, New Haven, CT 06520, USA., Trapnell C; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA; Brotman Baty Institute for Precision Medicine, Seattle, WA 98195, USA; Allen Discovery Center for Cell Lineage Tracing, Seattle, WA 98109, USA., Zheng Y; Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98109, USA; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA; Center for Cardiovascular Biology, University of Washington, Seattle WA 98109, USA., Murry CE; Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98109, USA; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA; Center for Cardiovascular Biology, University of Washington, Seattle WA 98109, USA; Department of Laboratory Medicine and Pathology, University of Washington, Seattle, WA 98195, USA; Department of Medicine/Cardiology, University of Washington, Seattle WA 98195, USA., Schweppe DK; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Freedman BS; Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98109, USA; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA; Division of Nephrology, Department of Medicine, University of Washington School of Medicine, Seattle, WA 98109, USA; Brotman Baty Institute for Precision Medicine, Seattle, WA 98195, USA; Department of Laboratory Medicine and Pathology, University of Washington, Seattle, WA 98195, USA; Kidney Research Institute, University of Washington School of Medicine, Seattle, WA 98109, USA., Stewart L; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA., Ekiert DC; Department of Cell Biology, New York University School of Medicine, New York, NY 10016, USA; Department of Microbiology, New York University School of Medicine, New York, NY 10016, USA., Schlessinger J; Department of Pharmacology, Yale University School of Medicine, New Haven, CT 06520, USA., Shendure J; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA; Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA; Brotman Baty Institute for Precision Medicine, Seattle, WA 98195, USA; Allen Discovery Center for Cell Lineage Tracing, Seattle, WA 98109, USA., Bhabha G; Department of Cell Biology, New York University School of Medicine, New York, NY 10016, USA., Ruohola-Baker H; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98109, USA; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA. Electronic address: hannele@uw.edu., Baker D; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA; Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA. Electronic address: dabaker@uw.edu.
Publikováno v:
Cell [Cell] 2024 Jul 11; Vol. 187 (14), pp. 3726-3740.e43. Date of Electronic Publication: 2024 Jun 10.
Autor:
Jaroenlak P; Department of Cell Biology, New York University Grossman School of Medicine, New York 10016, USA.; Center of Excellence for Molecular Biology and Genomics of Shrimp, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand., McCarty KL; Department of Cell Biology, New York University Grossman School of Medicine, New York 10016, USA.; Department of Microbiology, New York University Grossman School of Medicine, New York 10016, USA., Xia B; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Lam C; Department of Cell Biology, New York University Grossman School of Medicine, New York 10016, USA., Zwack EE; Department of Microbiology, New York University Grossman School of Medicine, New York 10016, USA., Yanai I; Institute for Computational Medicine, New York University Grossman School of Medicine, New York, NY 10016, USA.; Department of Biochemistry and Molecular Pharmacology, New York University Grossman School of Medicine, New York, NY 10016, USA., Bhabha G; Department of Cell Biology, New York University Grossman School of Medicine, New York 10016, USA.; Department of Biology, Johns Hopkins University, Baltimore, MD 21218, USA., Ekiert DC; Department of Cell Biology, New York University Grossman School of Medicine, New York 10016, USA.; Department of Microbiology, New York University Grossman School of Medicine, New York 10016, USA.; Department of Biology, Johns Hopkins University, Baltimore, MD 21218, USA.
Publikováno v:
BioRxiv : the preprint server for biology [bioRxiv] 2024 May 30. Date of Electronic Publication: 2024 May 30.
Autor:
Chang R; Department of Bioengineering, Stanford University, Stanford, United States., Davydov A; Department of Cell Biology, New York University School of Medicine, New York, United States., Jaroenlak P; Department of Cell Biology, New York University School of Medicine, New York, United States., Budaitis B; Department of Cell Biology, New York University School of Medicine, New York, United States., Ekiert DC; Department of Cell Biology, New York University School of Medicine, New York, United States.; Department of Microbiology, New York University School of Medicine, New York, United States., Bhabha G; Department of Cell Biology, New York University School of Medicine, New York, United States., Prakash M; Department of Bioengineering, Stanford University, Stanford, United States.; Woods Institute for the Environment, Stanford University, Stanford, United States.
Publikováno v:
ELife [Elife] 2024 Feb 21; Vol. 12. Date of Electronic Publication: 2024 Feb 21.
Autor:
Ilmain JK; Department of Microbiology, New York University Grossman School of Medicine, New York, New York, USA., Perelman SS; Department of Microbiology, New York University Grossman School of Medicine, New York, New York, USA., Panepinto MC; Proteomics Laboratory, Division of Advanced Research Technologies, New York University Grossman School of Medicine, New York, New York, USA., Irnov I; Department of Microbiology, New York University Grossman School of Medicine, New York, New York, USA., Coudray N; Applied Bioinformatics Laboratories, New York University Grossman School of Medicine, New York, New York, USA; Department of Cell Biology, New York University Grossman School of Medicine, New York, New York, USA., Samhadaneh N; Antimicrobial-Resistant Pathogens Program, New York University Langone Health, New York, New York, USA., Pironti A; Department of Microbiology, New York University Grossman School of Medicine, New York, New York, USA; Antimicrobial-Resistant Pathogens Program, New York University Langone Health, New York, New York, USA., Ueberheide B; Proteomics Laboratory, Division of Advanced Research Technologies, New York University Grossman School of Medicine, New York, New York, USA; Department of Biochemistry and Molecular Pharmacology, New York University Grossman School of Medicine, New York, New York, USA; Department of Neurology, Center for Cognitive Neurology, New York University Grossman School of Medicine, New York, New York, USA., Ekiert DC; Department of Microbiology, New York University Grossman School of Medicine, New York, New York, USA; Department of Cell Biology, New York University Grossman School of Medicine, New York, New York, USA; Antimicrobial-Resistant Pathogens Program, New York University Langone Health, New York, New York, USA., Bhabha G; Department of Cell Biology, New York University Grossman School of Medicine, New York, New York, USA; Antimicrobial-Resistant Pathogens Program, New York University Langone Health, New York, New York, USA., Torres VJ; Department of Microbiology, New York University Grossman School of Medicine, New York, New York, USA; Department of Host-Microbe Interactions, St Jude Children's Research Hospital, Memphis, Tennessee, USA. Electronic address: victor.torres@stjude.org.
Publikováno v:
The Journal of biological chemistry [J Biol Chem] 2023 Dec; Vol. 299 (12), pp. 105321. Date of Electronic Publication: 2023 Oct 04.
Autor:
Alexander LT; Biozentrum, University of Basel, Basel, Switzerland.; Computational Structural Biology, SIB Swiss Institute of Bioinformatics, Basel, Switzerland., Durairaj J; Biozentrum, University of Basel, Basel, Switzerland.; Computational Structural Biology, SIB Swiss Institute of Bioinformatics, Basel, Switzerland., Kryshtafovych A; Genome Center, University of California, Davis, Davis, California, USA., Abriata LA; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland., Bayo Y; Department of Biosciences, University of Milano, Milan, Italy.; IBBA-CNR Unit of Milano, Institute of Agricultural Biology and Biotechnology, Milan, Italy., Bhabha G; Department of Cell Biology, New York University School of Medicine, New York, New York, USA., Breyton C; Univ. Grenoble Alpes, CNRS, CEA, IBS, Grenoble, France., Caulton SG; The University of Birmingham, Birmingham, UK., Chen J; Department of Cell Biology, New York University School of Medicine, New York, New York, USA., Degroux S; Univ. Grenoble Alpes, CNRS, CEA, IBS, Grenoble, France., Ekiert DC; Department of Cell Biology, New York University School of Medicine, New York, New York, USA.; Department of Microbiology, New York University School of Medicine, New York, New York, USA., Erlandsen BS; Wellcome Centre for Cell Biology, Institute of Cell Biology, University of Edinburgh, Edinburgh, UK., Freddolino PL; Department of Biological Chemistry, Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, USA., Gilzer D; Department of Chemistry, Bielefeld University, Bielefeld, Germany., Greening C; Department of Microbiology, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.; Securing Antarctica's Environmental Future, Monash University, Clayton, Victoria, Australia.; Centre to Impact AMR, Monash University, Clayton, Victoria, Australia.; ARC Research Hub for Carbon Utilisation and Recycling, Monash University, Clayton, Victoria, Australia., Grimes JM; Division of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK., Grinter R; Department of Microbiology, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.; Centre for Electron Microscopy of Membrane Proteins, Monash Institute of Pharmaceutical Sciences, Parkville, Victoria, Australia., Gurusaran M; Wellcome Centre for Cell Biology, Institute of Cell Biology, University of Edinburgh, Edinburgh, UK., Hartmann MD; Max Planck Institute for Biology, Tübingen, Germany.; Interfaculty Institute of Biochemistry, University of Tübingen, Tübingen, Germany., Hitchman CJ; Department of Molecular and Cell Biology, Leicester Institute of Structural and Chemical Biology, University of Leicester, Leicester, UK., Keown JR; Division of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK., Kropp A; Department of Microbiology, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia., Kursula P; Department of Biomedicine, University of Bergen, Bergen, Norway.; Faculty of Biochemistry and Molecular Medicine & Biocenter Oulu, University of Oulu, Oulu, Finland., Lovering AL; The University of Birmingham, Birmingham, UK., Lemaitre B; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland., Lia A; Department of Molecular and Cell Biology, Leicester Institute of Structural and Chemical Biology, University of Leicester, Leicester, UK.; ISPA-CNR Unit of Lecce, Institute of Sciences of Food Production, Lecce, Italy., Liu S; Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, California, USA.; California NanoSystems Institute, University of California, Los Angeles, California, USA., Logotheti M; Max Planck Institute for Biology, Tübingen, Germany.; Interfaculty Institute of Biochemistry, University of Tübingen, Tübingen, Germany., Lu S; Lanzhou University School of Life Sciences, Lanzhou, China., Markússon S; Department of Biomedicine, University of Bergen, Bergen, Norway., Miller MD; Department of Biosciences, Rice University, Houston, Texas, USA., Minasov G; Department of Microbiology-Immunology, Northwestern Feinberg School of Medicine, Chicago, Illinois, USA., Niemann HH; Department of Chemistry, Bielefeld University, Bielefeld, Germany., Opazo F; NanoTag Biotechnologies GmbH, Göttingen, Germany.; Institute of Neuro- and Sensory Physiology, University of Göttingen Medical Center, Göttingen, Germany.; Center for Biostructural Imaging of Neurodegeneration (BIN), University of Göttingen Medical Center, Göttingen, Germany., Phillips GN Jr; Department of Biosciences, Rice University, Houston, Texas, USA.; Department of Chemistry, Rice University, Houston, Texas, USA., Davies OR; Wellcome Centre for Cell Biology, Institute of Cell Biology, University of Edinburgh, Edinburgh, UK., Rommelaere S; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland., Rosas-Lemus M; Department of Microbiology-Immunology, Northwestern Feinberg School of Medicine, Chicago, Illinois, USA., Roversi P; IBBA-CNR Unit of Milano, Institute of Agricultural Biology and Biotechnology, Milan, Italy.; Department of Molecular and Cell Biology, Leicester Institute of Structural and Chemical Biology, University of Leicester, Leicester, UK., Satchell K; Department of Microbiology-Immunology, Northwestern Feinberg School of Medicine, Chicago, Illinois, USA., Smith N; Department of Biochemistry and the Redox Biology Center, University of Nebraska, Lincoln, Nebraska, USA., Wilson MA; Department of Biochemistry and the Redox Biology Center, University of Nebraska, Lincoln, Nebraska, USA., Wu KL; Department of Chemistry, Rice University, Houston, Texas, USA., Xia X; Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, California, USA.; California NanoSystems Institute, University of California, Los Angeles, California, USA., Xiao H; Department of Biosciences, Rice University, Houston, Texas, USA.; Department of Chemistry, Rice University, Houston, Texas, USA.; Department of Bioengineering, Rice University, Houston, Texas, USA., Zhang W; Lanzhou University School of Life Sciences, Lanzhou, China., Zhou ZH; Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, California, USA.; California NanoSystems Institute, University of California, Los Angeles, California, USA., Fidelis K; Genome Center, University of California, Davis, Davis, California, USA., Topf M; University Medical Center Hamburg-Eppendorf (UKE), Hamburg, Germany.; Centre for Structural Systems Biology, Leibniz-Institut für Virologie (LIV), Hamburg, Germany., Moult J; Department of Cell Biology and Molecular Genetics, Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, Maryland, USA., Schwede T; Biozentrum, University of Basel, Basel, Switzerland.; Computational Structural Biology, SIB Swiss Institute of Bioinformatics, Basel, Switzerland.
Publikováno v:
Proteins [Proteins] 2023 Dec; Vol. 91 (12), pp. 1571-1599. Date of Electronic Publication: 2023 Jul 26.
Autor:
Antao NV; Department of Cell Biology, New York University School of Medicine, New York, NY, USA., Lam C; Department of Cell Biology, New York University School of Medicine, New York, NY, USA., Davydov A; Department of Cell Biology, New York University School of Medicine, New York, NY, USA., Riggi M; Department of Biochemistry, University of Utah, Salt Lake City, USA., Sall J; Office of Science and Research Microscopy Laboratory, New York University School of Medicine, New York, NY, USA., Petzold C; Office of Science and Research Microscopy Laboratory, New York University School of Medicine, New York, NY, USA., Liang FX; Department of Cell Biology, New York University School of Medicine, New York, NY, USA.; Office of Science and Research Microscopy Laboratory, New York University School of Medicine, New York, NY, USA., Iwasa JH; Department of Biochemistry, University of Utah, Salt Lake City, USA., Ekiert DC; Department of Cell Biology, New York University School of Medicine, New York, NY, USA. damian.ekiert@ekiertlab.org.; Department of Microbiology, New York University School of Medicine, New York, NY, USA. damian.ekiert@ekiertlab.org., Bhabha G; Department of Cell Biology, New York University School of Medicine, New York, NY, USA. gira.bhabha@gmail.com.
Publikováno v:
Nature communications [Nat Commun] 2023 Nov 23; Vol. 14 (1), pp. 7662. Date of Electronic Publication: 2023 Nov 23.