Zobrazeno 1 - 10
of 45
pro vyhledávání: '"Ekanayake, Saliya"'
Autor:
Selvitopi, Oguz, Ekanayake, Saliya, Guidi, Giulia, Awan, Muaaz G., Pavlopoulos, Georgios A., Azad, Ariful, Kyrpides, Nikos, Oliker, Leonid, Yelick, Katherine, Buluç, Aydın
Publikováno v:
SC'22: Proceedings of the International Conference on High Performance Computing, Networking, Storage and Analysis, 2022
Similarity search is one of the most fundamental computations that are regularly performed on ever-increasing protein datasets. Scalability is of paramount importance for uncovering novel phenomena that occur at very large scales. We unleash the powe
Externí odkaz:
http://arxiv.org/abs/2303.01845
Autor:
De Zoysa, B. D. M., Ali, Y. A. M. M. A., Maduranga, M. D. I., Perera, Indika, Ekanayake, Saliya, Vullikanti, Anil
The problem of finding dense components of a graph is a widely explored area in data analysis, with diverse applications in fields and branches of study including community mining, spam detection, computer security and bioinformatics. This research p
Externí odkaz:
http://arxiv.org/abs/2103.00154
Autor:
Selvitopi, Oguz, Ekanayake, Saliya, Guidi, Giulia, Pavlopoulos, Georgios, Azad, Ariful, Buluc, Aydin
Identifying similar protein sequences is a core step in many computational biology pipelines such as detection of homologous protein sequences, generation of similarity protein graphs for downstream analysis, functional annotation and gene location.
Externí odkaz:
http://arxiv.org/abs/2009.14467
Autor:
Yelick, Katherine, Buluc, Aydin, Awan, Muaaz, Azad, Ariful, Brock, Benjamin, Egan, Rob, Ekanayake, Saliya, Ellis, Marquita, Georganas, Evangelos, Guidi, Giulia, Hofmeyr, Steven, Selvitopi, Oguz, Teodoropol, Cristina, Oliker, Leonid
Genomic data sets are growing dramatically as the cost of sequencing continues to decline and small sequencing devices become available. Enormous community databases store and share this data with the research community, but some of these genomic dat
Externí odkaz:
http://arxiv.org/abs/2001.06989
Autor:
Ekanayake, Saliya
Big data queries are increasing in complexity and the performance of data analytics is of growing importance. To this end, Big Data on high-performance computing (HPC) infrastructure is becoming a pathway to high-performance data analytics. The state
Externí odkaz:
http://pqdtopen.proquest.com/#viewpdf?dispub=10195564
Publikováno v:
In Journal of Parallel and Distributed Computing October 2019 132:363-382
Autor:
Selvitopi, Oguz, Ekanayake, Saliya, Guidi, Giulia, Awan, Muaaz G., Pavlopoulos, Georgios A., Azad, Ariful, Kyrpides, Nikos, Oliker, Leonid, Yelick, Katherine, Buluç, Aydın
Publikováno v:
SC22: International Conference for High Performance Computing, Networking, Storage and Analysis.
Similarity search is one of the most fundamental computations that are regularly performed on ever-increasing protein datasets. Scalability is of paramount importance for uncovering novel phenomena that occur at very large scales. We unleash the powe
Autor:
Abeykoon, Vibhatha, Fox, Geoffrey, Kim, Minje, Ekanayake, Saliya, Kamburugamuve, Supun, Govindarajan, Kannan, Wickramasinghe, Pulasthi, Perera, Niranda, Widanage, Chathura, Uyar, Ahmet, Gunduz, Gurhan, Akkas, Selahatin
Publikováno v:
Concurrency & Computation: Practice & Experience; 4/10/2022, Vol. 34 Issue 8, p1-12, 12p
Akademický článek
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Autor:
Hughes Adam, Ruan Yang, Ekanayake Saliya, Bae Seung-Hee, Dong Qunfeng, Rho Mina, Qiu Judy, Fox Geoffrey
Publikováno v:
BMC Bioinformatics, Vol 13, Iss Suppl 2, p S9 (2012)
Abstract Background Modern pyrosequencing techniques make it possible to study complex bacterial populations, such as 16S rRNA, directly from environmental or clinical samples without the need for laboratory purification. Alignment of sequences acros
Externí odkaz:
https://doaj.org/article/dae2973f4cc945768a25d4af984d18bc