Zobrazeno 1 - 10
of 555
pro vyhledávání: '"Eisen, JA"'
Autor:
Mukherjee, S, Seshadri, R, Varghese, NJ, Eloe-Fadrosh, EA, Meier-Kolthoff, JP, Goeker, M, Coates, RC, Hadjithomas, M, Pavlopoulos, GA, Paez-Espino, D, Yoshikuni, Y, Visel, A, Whitman, WB, Garrity, GM, Eisen, JA, Hugenholtz, P, Pati, A, Ivanova, NN, Woyke, T, Klenk, H-P, Kyrpides, NC
Publikováno v:
NATURE BIOTECHNOLOGY, vol 36, iss 4
Mukherjee, S; Seshadri, R; Varghese, NJ; Eloe-Fadrosh, EA; Meier-Kolthoff, JP; Goeker, M; et al.(2018). 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life (vol 35, pg 676, 2017). NATURE BIOTECHNOLOGY, 36(4), 368-368. doi: 10.1038/nbt0418-368c. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/7h60j54c
Mukherjee, S; Seshadri, R; Varghese, NJ; Eloe-Fadrosh, EA; Meier-Kolthoff, JP; Goeker, M; et al.(2018). 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life (vol 35, pg 676, 2017). NATURE BIOTECHNOLOGY, 36(4), 368-368. doi: 10.1038/nbt0418-368c. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/7h60j54c
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::294b1aeeea257d455b29b258168385bd
https://escholarship.org/uc/item/7h60j54c
https://escholarship.org/uc/item/7h60j54c
Autor:
Bowers, RM, Kyrpides, NC, Stepanauskas, R, Harmon-Smith, M, Doud, D, Reddy, TBK, Schulz, F, Jarett, J, Rivers, AR, Eloe-Fadrosh, EA, Tringe, SG, Ivanova, NN, Copeland, A, Clum, A, Becraft, ED, Malmstrom, RR, Birren, B, Podar, M, Bork, P, Weinstock, GM, Garrity, GM, Dodsworth, JA, Yooseph, S, Sutton, G, Glockner, FO, Gilbert, JA, Nelson, WC, Hallam, SJ, Jungbluth, SP, Ettema, TJG, Tighe, S, Konstantinidis, KT, Liu, W-T, Baker, BJ, Rattei, T, Eisen, JA, Hedlund, B, McMahon, KD, Fierer, N, Knight, R, Finn, R, Cochrane, G, Karsch-Mizrachi, I, Tyson, GW, Rinke, C, Lapidus, A, Meyer, F, Yilmaz, P, Parks, DH, Eren, AM, Schriml, L, Banfield, JF, Hugenholtz, P, Woyke, T, Consortium, GS
Publikováno v:
Bowers, RM; Kyrpides, NC; Stepanauskas, R; Harmon-Smith, M; Doud, D; Reddy, TBK; et al.(2018). Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (vol 35, pg 725, 2017). NATURE BIOTECHNOLOGY, 36(2), 196-196. doi: 10.1038/nbt0218-196a. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/5v36v5j6
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::4834b8687b77d662458d75a97b63df79
http://www.escholarship.org/uc/item/5v36v5j6
http://www.escholarship.org/uc/item/5v36v5j6
Autor:
Eisen, JA
Publikováno v:
Eisen, JA. (2018). Back to the Sea: Seagrass As a Model System for Plant Microbiome Studies. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/8wv851r7
Talk by Jonathan Eisen on January 22, 2018.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::ffcc38791e0d2f4bfe2b539b5252a3df
http://www.escholarship.org/uc/item/8wv851r7
http://www.escholarship.org/uc/item/8wv851r7
Publikováno v:
Fahimipour, AK; Kardish, MR; Lang, JM; Green, JL; Eisen, JA; & Stachowicz, JJ. (2017). Globalscale structure of the eelgrass microbiome. Applied and Environmental Microbiology, 83(12). doi: 10.1128/AEM.03391-16. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/2wk1316w
© 2017 American Society for Microbiology. Plant-associated microorganisms are essential for their hosts' survival and performance. Yet, most plant microbiome studies to date have focused on terrestrial species sampled across relatively small spatial
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::9aede92d62ae07aae0d70d3f61107a64
http://www.escholarship.org/uc/item/2wk1316w
http://www.escholarship.org/uc/item/2wk1316w
Autor:
Jiao, JY, Carro, L, Liu, L, Gao, XY, Zhang, XT, Hozzein, WN, Lapidus, A, Huntemann, M, Reddy, TBK, Varghese, N, Hadjithomas, M, Ivanova, NN, Göker, M, Pillay, M, Eisen, JA, Woyke, T, Klenk, HP, Kyrpides, NC, Li, WJ
Publikováno v:
Jiao, JY; Carro, L; Liu, L; Gao, XY; Zhang, XT; Hozzein, WN; et al.(2017). Complete genome sequence of Jiangella gansuensis strain YIM 002T(DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds. Standards in Genomic Sciences, 12(1), 21. doi: 10.1186/s40793-017-0226-6. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/34s6p01n
© 2017 The Author(s). Jiangella gansuensis strain YIM 002T is the type strain of the type species of the genus Jiangella, which is at the present time composed of five species, and was isolated from desert soil sample in Gansu Province (China). The
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::019a66c7ec2dd25451d60fd1a1be64f3
http://www.escholarship.org/uc/item/34s6p01n
http://www.escholarship.org/uc/item/34s6p01n
Publikováno v:
Ettinger, CL; Voerman, SE; Lang, JM; Stachowicz, JJ; & Eisen, JA. (2017). Microbial communities in sediment from Zostera marina patches, but not the Z. marina leaf or root microbiomes, vary in relation to distance from patch edge. PeerJ, 2017(4). doi: 10.7717/peerj.3246. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/84x839hv
© 2017 Ettinger et al. Background. Zostera marina (also known as eelgrass) is a foundation species in coastal and marine ecosystems worldwide and is a model for studies of seagrasses (a paraphyletic group in the order Alismatales) that include all t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::c878235250da7b56559df3870e558f5d
http://www.escholarship.org/uc/item/84x839hv
http://www.escholarship.org/uc/item/84x839hv
Publikováno v:
Koenigsaecker, TM; Eisen, JA; & Coil, DA. (2016). Draft genome sequence of Gordonia sp. strain UCD-TK1 (phylum Actinobacteria). Genome Announcements, 4(5). doi: 10.1128/genomeA.01121-16. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/2t71136t
© 2016 Koenigsaecker et al. Here, we present the draft genome of Gordonia sp. strain UCD-TK1. The assembly contains 5,470,576 bp in 98 contigs. This strain was isolated from a disinfected ambulatory surgery center.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::3512ae8bc39ec44a4f2b3495e09ce1d6
http://www.escholarship.org/uc/item/2t71136t
http://www.escholarship.org/uc/item/2t71136t
Publikováno v:
Tokajian, S; Eisen, JA; Jospin, G; Matar, G; Araj, GF; & Coil, DA. (2016). Draft genome sequence of Klebsiella pneumoniae KGM-IMP216 harboring blaCTX-M-15, blaDHA-1, blaTEM-1B, blaNDM-1, blaSHV-28, and blaOXA-1, isolated from a patient in Lebanon. Genome Announcements, 4(1). doi: 10.1128/genomeA.01632-15. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/4240864n
© 2016 Tokajian et al. We present the draft genome of highly drug-resistant Klebsiella pneumoniae KGM-IMP216, isolated from a urine sample collected from a patient in Lebanon. The draft genome sequence consisted of 77 contigs, including a combined 5
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::17a8fc84d4876ff62068315703af64a5
http://www.escholarship.org/uc/item/4240864n
http://www.escholarship.org/uc/item/4240864n
Publikováno v:
Alexiev, A; Coil, DA; Jospin, G; Eisen, JA; & Adams, JY. (2016). Draft genome sequence of Klebsiella pneumoniae UCD-JA29 isolated from a patient with sepsis. Genome Announcements, 4(3). doi: 10.1128/genomeA.00234-16. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/0dj5t1rq
© 2016 Alexiev et al. Here, we present the 6,155,188-bp draft genome sequence of Klebsiella pneumoniae UCD-JA29, isolated from blood cultures from a patient with sepsis at the University of California, Davis Medical Center in Sacramento, California,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::f32e809e780fd7d8ee612673c410cb94
http://www.escholarship.org/uc/item/0dj5t1rq
http://www.escholarship.org/uc/item/0dj5t1rq
Autor:
Göker, M, Lu, M, Fiebig, A, Nolan, M, Lapidus, A, Tice, H, Del Rio, TG, Cheng, JF, Han, C, Tapia, R, Goodwin, LA, Pitluck, S, Liolios, K, Mavromatis, K, Pagani, I, Ivanova, N, Mikhailova, N, Pati, A, Chen, A, Palaniappan, K, Land, M, Mayilraj, S, Rohde, M, Detter, JC, Bunk, B, Spring, S, Wirth, R, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP
Publikováno v:
Göker, M; Lu, M; Fiebig, A; Nolan, M; Lapidus, A; Tice, H; et al.(2015). Genome sequence of the muddwelling archaeon Methanoplanus limicola type strain (DSM 2279T), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia. Standards in Genomic Sciences, 9(3), 1076-1088. doi: 10.4056/sigs.5138968. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/3wc5t8bq
Methanoplanus limicola Wildgruber et al. 1984 is a mesophilic methanogen that was isolated from a swamp composed of drilling waste near Naples, Italy, shortly after the Archaea were recognized as a separate domain of life. Methanoplanus is the type g
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::1ba6011694434777ce9592a231d71883
http://www.escholarship.org/uc/item/3wc5t8bq
http://www.escholarship.org/uc/item/3wc5t8bq