Zobrazeno 1 - 7
of 7
pro vyhledávání: '"Edwin Rodriguez-Horta"'
Autor:
Edwin Rodriguez Horta, Martin Weigt
Publikováno v:
PLoS Computational Biology, Vol 17, Iss 5, p e1008957 (2021)
Coevolution-based contact prediction, either directly by coevolutionary couplings resulting from global statistical sequence models or using structural supervision and deep learning, has found widespread application in protein-structure prediction fr
Externí odkaz:
https://doaj.org/article/f6a64023ce964bc699324b542fcabcab
Publikováno v:
Entropy, Vol 21, Iss 11, p 1090 (2019)
Global coevolutionary models of protein families have become increasingly popular due to their capacity to predict residue−residue contacts from sequence information, but also to predict fitness effects of amino acid substitutions or to infer prote
Externí odkaz:
https://doaj.org/article/8604744e7d9b4484a22849fe26da000a
Publikováno v:
Journal of Statistical Mechanics: Theory and Experiment
Journal of Statistical Mechanics: Theory and Experiment, 2021, 2021 (7), pp.073501. ⟨10.1088/1742-5468/ac06c2⟩
Journal of Statistical Mechanics: Theory and Experiment, 2021, 2021 (7), pp.073501. ⟨10.1088/1742-5468/ac06c2⟩
Inverse statistical physics aims at inferring models compatible with a set of empirical averages estimated from a high-dimensional dataset of independently distributed equilibrium configurations of a given system. However, in several applications suc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::02c32585f9132e5604b2f0c4f248bcd9
https://hal.science/hal-03721087
https://hal.science/hal-03721087
Autor:
Edwin Rodriguez Horta, Martin Weigt
Coevolution-based contact prediction, either directly by coevolutionary couplings resulting from global statistical sequence models or using structural supervision and deep learning, has found widespread application in protein-structure prediction fr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::90da94457748643f461ce4471fbedb81
https://doi.org/10.1101/2020.08.12.247577
https://doi.org/10.1101/2020.08.12.247577
Publikováno v:
Acta Crystallographica Section A Foundations and Advances. 73:377-386
This is the second contribution in a series of papers dealing with dynamical models in equilibrium theories of polytypism. A Hamiltonian introduced by Ahmad & Khan [Phys. Status Solidi B(2000),218, 425–430] avoids the unphysical assignment of inter
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::184a2c6435584caceb2597d10b3c9999
https://doi.org/10.1107/s2053273317008968
https://doi.org/10.1107/s2053273317008968
Publikováno v:
Physica A: Statistical Mechanics and its Applications. 458:303-312
The correlated biased random walk with latency in one and two dimensions is discussed with regard to the portion of irreducible random movement and structured movement. It is shown how a quantitative analysis can be carried out by using computational
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3887c02e352b0766824ee94a2174a0a7
https://doi.org/10.1016/j.physa.2016.03.017
https://doi.org/10.1016/j.physa.2016.03.017
Publikováno v:
Acta crystallographica. Section A, Foundations and advances. 73(Pt 4)
The stacking problem is approached by computational mechanics, using an Ising next nearest neighbor model. Computational mechanics allows to treat the stacking arrangement as an information processing system in the light of a symbol generating proces
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4d0608caed7397f55b7d4600cc5682fd
https://pubmed.ncbi.nlm.nih.gov/28660867
https://pubmed.ncbi.nlm.nih.gov/28660867