Výsledky vyhledávání - "Edward V. Karamov"

Sequence Note: Extreme Founder Effect in an HIV Type 1 Subtype A Epidemic among Drug Users in Svetlogorsk, Belarus

Autor: Edward V. Karamov, Leonid P. Titov, Jaap Goudsmit, V. F. Eremin, Vladimir V. Lukashov

Publikováno v: AIDS Research and Human Retroviruses. 14:1299-1303

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::f0e1a9ef83eaf68ed0abb70f02a6546c
https://doi.org/10.1089/aid.1998.14.1299

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Variability Analysis of HIV-1 gp120 V3 Region: IV. Distribution Functions for Intra- and Inter- Subtype Amino Acid Hamming Distances

Autor: Maxim V. Denisov, Alex N. Yudin, Ilya V. Yaroslavtsev, Michael Yu. Shchelkanov, Alexander A. Vedenov, A. A. Slavsky, Philip O. Tsvetkov, Nicole S. Starikov, Edward V. Karamov

Publikováno v: Journal of Biomolecular Structure and Dynamics. 15:877-885

Distribution functions for intra- and inter- HIV-1 V3-loop subtypes amino acid Hamming distances were calculated (850 V3-loop sequences from the Los Alamos HIV-1 Database (1996) were used). These functions have pronounced bell-like shape. Such shapes

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4f2a819fe21c249215d5a76a55377de0
https://doi.org/10.1080/07391102.1998.10508209

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Simultaneous introduction of distinct HIV-1 subtypes into different risk groups in Russia, Byelorussia and Lithuania

Autor: Vladimir V. Lukashov, Marion T.E. Cornelissen, Jaap Goudsmit, Marina N. Papuashvilli, Pyotr G. Rytik, Rakhim M. Khaitov, Edward V. Karamov, Frank de Wolf

Publikováno v: AIDS. 9:435-439

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::0e0410d461dd91d8817e10910fb12d57
https://doi.org/10.1097/00002030-199509050-00004

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Quantitative PCR as a method for monitoring retroviral infection on the gene level

Autor: Boris M. Mednikov, Natalia G. Yaroslavtseva, Edward V. Karamov, Angelika V. Kozlova, Andrei A. Yolov

Publikováno v: Virus Genes. 10:45-51

For monitoring retroviral infection on the gene level, we propose the use of quantitative PCR with two internal standards: one for a fragment of the viral genome and the other for the host cell marker gene. The standards (one for HIV and the other fo

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ed73bbdda884cdf2c9d427d4b1820ebd
https://doi.org/10.1007/bf01724296

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Dependencies of substitution steps number on Hamming distance are identical for one-parameter discrete models of both direct and parallel genetic diversity

Autor: Nicole S. Starikov, Andrei A. Natan, Michael Yu. Shchelkanov, Lev A. Soinov, Vadim Zalunin, Edward V. Karamov, Victor B. Kireev

Publikováno v: Journal of biomolecular structuredynamics. 16(1)

With the help of previously introduced enumeration procedure (M.Yu. Shchelkanov, A.N. Yudin, A.V Antonov, N.S. Starikov, A.A. Vedenov, E.V. Karamov, J. Biomol. Struct. Dyn. 15, 217-229 (1997)) and probability distribution function for the enumeration

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b910ffb93860bfd0ef140f0690bc4511
https://pubmed.ncbi.nlm.nih.gov/9745902

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Variability analysis of HIV-1 gp120 V3 region: III. Distinctions between various sets of peptide fragments derived from the sequences belonging to different HIV-1 taxons

Autor: Nicole S. Starikov, Ilya V. Yaroslavtsev, Alex V. Antonov, Michael Yu. Shchelkanov, Igor L. Novak, Alexander A. Vedenov, Edward V. Karamov, Alex N. Yudin

Publikováno v: Journal of biomolecular structuredynamics. 15(3)

Distinction criterion for various sets of fixed length peptide fragments and integral distinction measure for various sets of peptide fragments with different length and start position ranges have been introduced on the base of an enumeration procedu

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8b1abc243e69d6d5a97864a6cadd38ce
https://pubmed.ncbi.nlm.nih.gov/9440000

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Variability analysis of HIV-1 gp120 V3 region: II. Hierarchy of taxons

Autor: Edward V. Karamov, Alexander A. Vedenov, Alex V. Antonov, Michael Yu. Shchelkanov, Lev A. Soinov, Vadim Zalunin, Alex N. Yudin

Publikováno v: Journal of biomolecular structuredynamics. 15(2)

In the previous work (M. Yu. Shchelkanov, A. N. Yudin, A. V. Antonov, N. S. Starikov, A. A. Vedenov, E. V. Karamov, J. Biomol. Struct. Dyn. 15, 217–229 (1997)) we have introduced the amino acid distribution function within HIV-1 taxons and Hamming-

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9a683071491a36990e9e68db5f9cd447
https://pubmed.ncbi.nlm.nih.gov/9399151

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Variability analysis of HIV-1 gp120 V3 region: I. Point estimators for the amino acid distribution characteristics

Autor: Edward V. Karamov, Alex N. Yudin, Alex V. Antonov, Nicole S. Starikov, Alexander A. Vedenov, Michael Yu. Shchelkanov

Publikováno v: Journal of biomolecular structuredynamics. 15(2)

Enumerating procedure for symbol sequences is proposed. Relationship between Hamming distance for symbol sequences and Euclidean distance for corresponding enumerations is established, and more universal Hamming-transformed Euclidean measure is const

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8f3392e1a59194270d9032b381a8250e
https://pubmed.ncbi.nlm.nih.gov/9399150

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