Zobrazeno 1 - 6
of 6
pro vyhledávání: '"Ebru Kocakaya"'
Autor:
Marek Ostaszewski, Anna Niarakis, Alexander Mazein, Inna Kuperstein, Robert Phair, Aurelio Orta‐Resendiz, Vidisha Singh, Sara Sadat Aghamiri, Marcio Luis Acencio, Enrico Glaab, Andreas Ruepp, Gisela Fobo, Corinna Montrone, Barbara Brauner, Goar Frishman, Luis Cristóbal Monraz Gómez, Julia Somers, Matti Hoch, Shailendra Kumar Gupta, Julia Scheel, Hanna Borlinghaus, Tobias Czauderna, Falk Schreiber, Arnau Montagud, Miguel Ponce de Leon, Akira Funahashi, Yusuke Hiki, Noriko Hiroi, Takahiro G Yamada, Andreas Dräger, Alina Renz, Muhammad Naveez, Zsolt Bocskei, Francesco Messina, Daniela Börnigen, Liam Fergusson, Marta Conti, Marius Rameil, Vanessa Nakonecnij, Jakob Vanhoefer, Leonard Schmiester, Muying Wang, Emily E Ackerman, Jason E Shoemaker, Jeremy Zucker, Kristie Oxford, Jeremy Teuton, Ebru Kocakaya, Gökçe Yağmur Summak, Kristina Hanspers, Martina Kutmon, Susan Coort, Lars Eijssen, Friederike Ehrhart, D A B Rex, Denise Slenter, Marvin Martens, Nhung Pham, Robin Haw, Bijay Jassal, Lisa Matthews, Marija Orlic‐Milacic, Andrea Senff‐Ribeiro, Karen Rothfels, Veronica Shamovsky, Ralf Stephan, Cristoffer Sevilla, Thawfeek Varusai, Jean‐Marie Ravel, Rupsha Fraser, Vera Ortseifen, Silvia Marchesi, Piotr Gawron, Ewa Smula, Laurent Heirendt, Venkata Satagopam, Guanming Wu, Anders Riutta, Martin Golebiewski, Stuart Owen, Carole Goble, Xiaoming Hu, Rupert W Overall, Dieter Maier, Angela Bauch, Benjamin M Gyori, John A Bachman, Carlos Vega, Valentin Grouès, Miguel Vazquez, Pablo Porras, Luana Licata, Marta Iannuccelli, Francesca Sacco, Anastasia Nesterova, Anton Yuryev, Anita de Waard, Denes Turei, Augustin Luna, Ozgun Babur, Sylvain Soliman, Alberto Valdeolivas, Marina Esteban‐Medina, Maria Peña‐Chilet, Kinza Rian, Tomáš Helikar, Bhanwar Lal Puniya, Dezso Modos, Agatha Treveil, Marton Olbei, Bertrand De Meulder, Stephane Ballereau, Aurélien Dugourd, Aurélien Naldi, Vincent Noël, Laurence Calzone, Chris Sander, Emek Demir, Tamas Korcsmaros, Tom C Freeman, Franck Augé, Jacques S Beckmann, Jan Hasenauer, Olaf Wolkenhauer, Egon L Willighagen, Alexander R Pico, Chris T Evelo, Marc E Gillespie, Lincoln D Stein, Henning Hermjakob, Peter D'Eustachio, Julio Saez‐Rodriguez, Joaquin Dopazo, Alfonso Valencia, Hiroaki Kitano, Emmanuel Barillot, Charles Auffray, Rudi Balling, Reinhard Schneider, the COVID‐19 Disease Map Community
Publikováno v:
Molecular Systems Biology, Vol 17, Iss 12, Pp n/a-n/a (2021)
Externí odkaz:
https://doaj.org/article/5d30269056c148bf87fd8eb20e9f3e1c
Autor:
Marek Ostaszewski, Anna Niarakis, Alexander Mazein, Inna Kuperstein, Robert Phair, Aurelio Orta‐Resendiz, Vidisha Singh, Sara Sadat Aghamiri, Marcio Luis Acencio, Enrico Glaab, Andreas Ruepp, Gisela Fobo, Corinna Montrone, Barbara Brauner, Goar Frishman, Luis Cristóbal Monraz Gómez, Julia Somers, Matti Hoch, Shailendra Kumar Gupta, Julia Scheel, Hanna Borlinghaus, Tobias Czauderna, Falk Schreiber, Arnau Montagud, Miguel Ponce de Leon, Akira Funahashi, Yusuke Hiki, Noriko Hiroi, Takahiro G Yamada, Andreas Dräger, Alina Renz, Muhammad Naveez, Zsolt Bocskei, Francesco Messina, Daniela Börnigen, Liam Fergusson, Marta Conti, Marius Rameil, Vanessa Nakonecnij, Jakob Vanhoefer, Leonard Schmiester, Muying Wang, Emily E Ackerman, Jason E Shoemaker, Jeremy Zucker, Kristie Oxford, Jeremy Teuton, Ebru Kocakaya, Gökçe Yağmur Summak, Kristina Hanspers, Martina Kutmon, Susan Coort, Lars Eijssen, Friederike Ehrhart, Devasahayam Arokia Balaya Rex, Denise Slenter, Marvin Martens, Nhung Pham, Robin Haw, Bijay Jassal, Lisa Matthews, Marija Orlic‐Milacic, Andrea Senff-Ribeiro, Karen Rothfels, Veronica Shamovsky, Ralf Stephan, Cristoffer Sevilla, Thawfeek Varusai, Jean‐Marie Ravel, Rupsha Fraser, Vera Ortseifen, Silvia Marchesi, Piotr Gawron, Ewa Smula, Laurent Heirendt, Venkata Satagopam, Guanming Wu, Anders Riutta, Martin Golebiewski, Stuart Owen, Carole Goble, Xiaoming Hu, Rupert W Overall, Dieter Maier, Angela Bauch, Benjamin M Gyori, John A Bachman, Carlos Vega, Valentin Grouès, Miguel Vazquez, Pablo Porras, Luana Licata, Marta Iannuccelli, Francesca Sacco, Anastasia Nesterova, Anton Yuryev, Anita de Waard, Denes Turei, Augustin Luna, Ozgun Babur, Sylvain Soliman, Alberto Valdeolivas, Marina Esteban‐Medina, Maria Peña‐Chilet, Kinza Rian, Tomáš Helikar, Bhanwar Lal Puniya, Dezso Modos, Agatha Treveil, Marton Olbei, Bertrand De Meulder, Stephane Ballereau, Aurélien Dugourd, Aurélien Naldi, Vincent Noël, Laurence Calzone, Chris Sander, Emek Demir, Tamas Korcsmaros, Tom C Freeman, Franck Augé, Jacques S Beckmann, Jan Hasenauer, Olaf Wolkenhauer, Egon L Willighagen, Alexander R Pico, Chris T Evelo, Marc E Gillespie, Lincoln D Stein, Henning Hermjakob, Peter D'Eustachio, Julio Saez‐Rodriguez, Joaquin Dopazo, Alfonso Valencia, Hiroaki Kitano, Emmanuel Barillot, Charles Auffray, Rudi Balling, Reinhard Schneider, the COVID‐19 Disease Map Community
Publikováno v:
Molecular Systems Biology, Vol 17, Iss 10, Pp n/a-n/a (2021)
Abstract We need to effectively combine the knowledge from surging literature with complex datasets to propose mechanistic models of SARS‐CoV‐2 infection, improving data interpretation and predicting key targets of intervention. Here, we describe
Externí odkaz:
https://doaj.org/article/07d2352966634fc58ef9a394d1092d67
Autor:
Mehmet Altay Unal, Ceylan Verda Bitirim, Julia Somers, Gokce Yagmur Summak, Omur Besbinar, Ebru Kocakaya, Cansu Gurcan, Hasan Nazir, Zeynep Busra Aksoy Ozer, Sibel Aysil Ozkan, Sidar Bereketoglu, Aykut Ozkul, Emek Demir, Kamil Can Akcali, Acelya Yilmazer
Heme oxygenase-1 (HO-1) is a stress-induced enzyme that catalyzes the breakdown of heme into biliverdin, carbon monoxide, and iron. Targeting HO-1 to treat severe COVID-19 has been suggested by several groups, yet the role of HO-1 in SARS-CoV-2 infec
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::6a5dcef7373beafea6fa999a4ee7d41d
https://doi.org/10.1101/2022.05.24.493187
https://doi.org/10.1101/2022.05.24.493187
Autor:
Alpay Azap, Sibel A. Ozkan, Gokce Yagmur Summak, Dunya Aydos, Hasan Nazir, Nil Demir, Merve Murat, Inci Cevher Zeytin, Emek Demir, Julia Somers, Ezgi Goksoy, Açelya Yilmazer, Ceylan Verda Bitirim, Kamil Can Akcali, Zeynep Busra Aksoy Ozer, Aykut Ozkul, Sidar Bereketoglu, Zeynep Eran, Omur Besbinar, Cansu Gurcan, Ebru Kocakaya, Mehmet Ünal
Publikováno v:
Canadian journal of physiology and pharmacology. 99(5)
Ribavirin is a guanosine analog with broad-spectrum antiviral activity against RNA viruses. Based on this, we aimed to show the anti-SARS-CoV-2 activity of this drug molecule via in vitro, in silico, and molecular techniques. Ribavirin showed antivir
Autor:
Dezso Modos, Julia Scheel, Ralf Stephan, Piotr Gawron, Kristina Hanspers, Jean-Marie Ravel, Alexander Mazein, Corinna Montrone, Alberto Valdeolivas, Marek Ostaszewski, Susan L. Coort, Hiroaki Kitano, Tom C. Freeman, Vera Ortseifen, Vanessa Nakonecnij, M Orlic-Milacic, Jan Hasenauer, Veronica Shamovsky, Venkata P. Satagopam, Goar Frishman, M. Vazquez, D A B Rex, Miguel Ponce de Leon, Sylvain Soliman, Luana Licata, Ebru Kocakaya, Kinza Rian, Yusuke Hiki, Marton Olbei, Martina Kutmon, Bijay Jassal, Akira Funahashi, Lisa Matthews, Xiaoming Hu, Marcio Luis Acencio, Zsolt Bocskei, Robin Haw, Joaquín Dopazo, Agatha Treveil, Andrea Senff-Ribeiro, Tomáš Helikar, Chris T. Evelo, John A. Bachman, Julio Saez-Rodriguez, Takahiro G. Yamada, Emmanuel Barillot, Anton Yuryev, Bertrand De Meulder, Matti Hoch, Guanming Wu, Daniela Börnigen, Rudi Balling, Karen Rothfels, Pablo Porras, Hanna Borlinghaus, Andreas Dräger, Aurélien Naldi, Marta Iannuccelli, Leonard Schmiester, Dieter Maier, Jason E. Shoemaker, Valentin Grouès, Jakob Vanhoefer, Marius Rameil, Sara Sadat Aghamiri, Tobias Czauderna, Inna Kuperstein, Nhung Pham, Reinhard Schneider, Marina Esteban-Medina, Carole Goble, Benjamin M. Gyori, Emily E. Ackerman, Anita de Waard, Bhanwar Lal Puniya, Olaf Wolkenhauer, Alfonso Valencia, Julia Somers, Ewa Smula, Gisela Fobo, Robert Phair, Chris Sander, Laurent Heirendt, Carlos Vega, Jeremy Teuton, Emek Demir, Alina Renz, Tamas Korcsmaros, Vidisha Singh, Anastasia P. Nesterova, Andreas Ruepp, Lars M. T. Eijssen, Thawfeek M. Varusai, Aurelien Dugourd, Silvia Marchesi, Cristoffer Sevilla, Falk Schreiber, Barbara Brauner, Noriko Hiroi, Augustin Luna, Muying Wang, Shailendra K. Gupta, Egon Willighagen, Charles Auffray, Denise Slenter, Kristie L. Oxford, Franck Augé, Friederike Ehrhart, Muhammad Naveez, Stuart Owen, Arnau Montagud, Liam Fergusson, Enrico Glaab, Martin Golebiewski, Laurence Calzone, Alexander R. Pico, Dénes Türei, Marvin Martens, Henning Hermjakob, Rupert W. Overall, Jeremy Zucker, Özgün Babur, Gokce Yagmur Summak, Lincoln Stein, Anders Riutta, Anna Niarakis, Aurelio Orta-Resendiz, Francesca Sacco, Maria Peña-Chilet, Marta Conti, Jacques S. Beckmann, Angela Bauch
We describe a large-scale community effort to build an open-access, interoperable, and computable repository of COVID-19 molecular mechanisms - the COVID-19 Disease Map. We discuss the tools, platforms, and guidelines necessary for the distributed de
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::072fd0730fda5cdbe9087ff60a56abe9
https://hal.archives-ouvertes.fr/hal-03151664/document
https://hal.archives-ouvertes.fr/hal-03151664/document
Autor:
Nil Demir, Julia Somers, Sibel A. Ozkan, Ceylan Verda Bitirim, Zeynep Eran, Sidar Bereketoglu, Alpay Azap, Ebru Kocakaya, Mehmet Ünal, Ezgi Goksoy, Emek Demir, Cansu Gurcan, Açelya Yilmazer, Omur Bul, Merve Murat, Kamil Can Akcali, Inci Cevher Zeytin, Aykut Ozkul, Dunya Aydos, Gokce Yagmur Summak, Hasan Nazir
Ribavirin is a guanosine analog with broad-spectrum antiviral activity against RNA viruses. Based on this, we aimed to show the anti-SARS-CoV-2 activity of this drug molecule via in vitro, in silico, and molecular techniques. Ribavirin showed antivir
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bbef10eb8b61d4de27bc924e5ab6d693
https://doi.org/10.1101/2020.12.04.410092
https://doi.org/10.1101/2020.12.04.410092