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Dense sampling of bird diversity increases power of comparative genomics.

Autor: Feng S; China National GeneBank, BGI-Shenzhen, Shenzhen, China.; State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China.; BGI-Shenzhen, Shenzhen, China., Stiller J; Villum Centre for Biodiversity Genomics, Section for Ecology and Evolution, Department of Biology, University of Copenhagen, Copenhagen, Denmark., Deng Y; China National GeneBank, BGI-Shenzhen, Shenzhen, China.; BGI-Shenzhen, Shenzhen, China.; Villum Centre for Biodiversity Genomics, Section for Ecology and Evolution, Department of Biology, University of Copenhagen, Copenhagen, Denmark., Armstrong J; UC Santa Cruz Genomics Institute, UC Santa Cruz, Santa Cruz, CA, USA., Fang Q; China National GeneBank, BGI-Shenzhen, Shenzhen, China.; BGI-Shenzhen, Shenzhen, China.; Villum Centre for Biodiversity Genomics, Section for Ecology and Evolution, Department of Biology, University of Copenhagen, Copenhagen, Denmark., Reeve AH; Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark., Xie D; China National GeneBank, BGI-Shenzhen, Shenzhen, China.; BGI-Shenzhen, Shenzhen, China.; BGI Education Center, University of Chinese Academy of Sciences, Shenzhen, China., Chen G; China National GeneBank, BGI-Shenzhen, Shenzhen, China.; BGI-Shenzhen, Shenzhen, China.; BGI Education Center, University of Chinese Academy of Sciences, Shenzhen, China., Guo C; China National GeneBank, BGI-Shenzhen, Shenzhen, China.; BGI-Shenzhen, Shenzhen, China., Faircloth BC; Department of Biological Sciences, Louisiana State University, Baton Rouge, LA, USA.; Museum of Natural Science, Louisiana State University, Baton Rouge, LA, USA., Petersen B; Centre of Excellence for Omics-Driven Computational Biodiscovery (COMBio), Faculty of Applied Sciences, AIMST University, Kedah, Malaysia.; Section for Evolutionary Genomics, The GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark., Wang Z; China National GeneBank, BGI-Shenzhen, Shenzhen, China.; BGI-Shenzhen, Shenzhen, China.; MOE Laboratory of Biosystems Homeostasis and Protection, Life Sciences Institute, Zhejiang University, Hangzhou, China.; Department of Neuroscience and Developmental Biology, University of Vienna, Vienna, Austria., Zhou Q; MOE Laboratory of Biosystems Homeostasis and Protection, Life Sciences Institute, Zhejiang University, Hangzhou, China.; Department of Neuroscience and Developmental Biology, University of Vienna, Vienna, Austria.; Center for Reproductive Medicine, The 2nd Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, China., Diekhans M; UC Santa Cruz Genomics Institute, UC Santa Cruz, Santa Cruz, CA, USA., Chen W; China National GeneBank, BGI-Shenzhen, Shenzhen, China.; BGI-Shenzhen, Shenzhen, China., Andreu-Sánchez S; Villum Centre for Biodiversity Genomics, Section for Ecology and Evolution, Department of Biology, University of Copenhagen, Copenhagen, Denmark., Margaryan A; Section for Evolutionary Genomics, The GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.; Institute of Molecular Biology, National Academy of Sciences, Yerevan, Armenia., Howard JT; Novogene, Durham, NC, USA., Parent C; Duke University Medical Center, Durham, NC, USA., Pacheco G; Section for Evolutionary Genomics, The GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark., Sinding MS; Section for Evolutionary Genomics, The GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark., Puetz L; Section for Evolutionary Genomics, The GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark., Cavill E; Section for Evolutionary Genomics, The GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark., Ribeiro ÂM; Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark., Eckhart L; Department of Dermatology, Medical University of Vienna, Vienna, Austria., Fjeldså J; Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.; Center for Macroecology, Evolution, and Climate, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark., Hosner PA; Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.; Center for Macroecology, Evolution, and Climate, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark., Brumfield RT; Department of Biological Sciences, Louisiana State University, Baton Rouge, LA, USA.; Museum of Natural Science, Louisiana State University, Baton Rouge, LA, USA., Christidis L; Southern Cross University, Coffs Harbour, New South Wales, Australia., Bertelsen MF; Centre for Zoo and Wild Animal Health, Copenhagen Zoo, Frederiksberg, Denmark., Sicheritz-Ponten T; Centre of Excellence for Omics-Driven Computational Biodiscovery (COMBio), Faculty of Applied Sciences, AIMST University, Kedah, Malaysia.; Section for Evolutionary Genomics, The GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark., Tietze DT; Center of Natural History, Universität Hamburg, Hamburg, Germany., Robertson BC; Department of Zoology, University of Otago, Dunedin, New Zealand., Song G; Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing, China.; Environmental Futures Research Institute, Griffith University, Nathan, Queensland, Australia., Borgia G; Department of Biology, University of Maryland, College Park, MD, USA., Claramunt S; Department of Natural History, Royal Ontario Museum, Toronto, Ontario, Canada.; Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada., Lovette IJ; Cornell Lab of Ornithology, Cornell University, Ithaca, NY, USA., Cowen SJ; Biodiversity and Conservation Science, Department of Biodiversity Conservation and Attractions, Perth, Western Australia, Australia., Njoroge P; Ornithology Section, Zoology Department, National Museums of Kenya, Nairobi, Kenya., Dumbacher JP; Ornithology and Mammalogy, California Academy of Sciences, San Francisco, CA, USA., Ryder OA; San Diego Zoo Institute for Conservation Research, Escondido, CA, USA.; Evolution, Behavior, and Ecology, Division of Biology, University of California San Diego, La Jolla, CA, USA., Fuchs J; Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum National d'Histoire Naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France., Bunce M; Trace and Environmental DNA (TrEnD) Laboratory, School of Molecular and Life Sciences, Curtin University, Western Australia, Perth, Australia., Burt DW; UQ Genomics, University of Queensland, Brisbane, Queensland, Australia., Cracraft J; Department of Ornithology, American Museum of Natural History, New York, NY, USA., Meng G; China National GeneBank, BGI-Shenzhen, Shenzhen, China., Hackett SJ; Integrative Research Center, Field Museum of Natural History, Chicago, IL, USA., Ryan PG; FitzPatrick Institute of African Ornithology, University of Cape Town, Cape Town, South Africa., Jønsson KA; Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark., Jamieson IG; Department of Zoology, University of Otago, Dunedin, New Zealand., da Fonseca RR; Center for Macroecology, Evolution, and Climate, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark., Braun EL; Department of Biology, University of Florida, Gainesville, FL, USA., Houde P; Department of Biology, New Mexico State University, Las Cruces, NM, USA., Mirarab S; Department of Electrical and Computer Engineering, University of California San Diego, La Jolla, CA, USA., Suh A; Department of Ecology and Genetics - Evolutionary Biology, Evolutionary Biology Centre (EBC), Science for Life Laboratory, Uppsala University, Uppsala, Sweden.; Department of Organismal Biology - Systematic Biology, Evolutionary Biology Centre (EBC), Science for Life Laboratory, Uppsala University, Uppsala, Sweden.; School of Biological Sciences, University of East Anglia, Norwich, UK., Hansson B; Department of Biology, Lund University, Lund, Sweden., Ponnikas S; Department of Biology, Lund University, Lund, Sweden., Sigeman H; Department of Biology, Lund University, Lund, Sweden., Stervander M; Department of Biology, Lund University, Lund, Sweden.; Institute of Ecology and Evolution, University of Oregon, Eugene, OR, USA., Frandsen PB; Department of Plant and Wildlife Sciences, Brigham Young University, Provo, UT, USA.; Data Science Lab, Office of the Chief Information Officer, Smithsonian Institution, Washington, DC, USA., van der Zwan H; Focus Area for Human Metabolomics, North-West University, Potchefstroom, South Africa., van der Sluis R; Focus Area for Human Metabolomics, North-West University, Potchefstroom, South Africa., Visser C; Department of Animal Sciences, University of Pretoria, Pretoria, South Africa., Balakrishnan CN; Department of Biology, East Carolina University, Greenville, NC, USA., Clark AG; Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY, USA., Fitzpatrick JW; Cornell Lab of Ornithology, Cornell University, Ithaca, NY, USA., Bowman R; Avian Ecology Program, Archbold Biological Station, Venus, FL, USA., Chen N; Department of Biology, University of Rochester, Rochester, NY, USA., Cloutier A; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA.; Museum of Comparative Zoology, Harvard University, Cambridge, MA, USA., Sackton TB; Informatics Group, Harvard University, Cambridge, MA, USA., Edwards SV; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA.; Museum of Comparative Zoology, Harvard University, Cambridge, MA, USA., Foote DJ; Department of Biology, East Carolina University, Greenville, NC, USA.; Sylvan Heights Bird Park, Scotland Neck, NC, USA., Shakya SB; Department of Biological Sciences, Louisiana State University, Baton Rouge, LA, USA.; Museum of Natural Science, Louisiana State University, Baton Rouge, LA, USA., Sheldon FH; Department of Biological Sciences, Louisiana State University, Baton Rouge, LA, USA.; Museum of Natural Science, Louisiana State University, Baton Rouge, LA, USA., Vignal A; GenPhySE, INRA, INPT, INP-ENVT, Université de Toulouse, Castanet-Tolosan, France., Soares AER; Laboratório Nacional de Computação Científica, Petrópolis, Brazil.; Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA, USA., Shapiro B; Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA, USA.; Howard Hughes Medical Institute, University of California Santa Cruz, Santa Cruz, CA, USA., González-Solís J; Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain.; Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals (BEECA), Universitat de Barcelona, Barcelona, Spain., Ferrer-Obiol J; Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain.; Departament de Genètica, Microbiologia i Estadística, Universitat de Barcelona, Barcelona, Spain., Rozas J; Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain.; Departament de Genètica, Microbiologia i Estadística, Universitat de Barcelona, Barcelona, Spain., Riutort M; Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain.; Departament de Genètica, Microbiologia i Estadística, Universitat de Barcelona, Barcelona, Spain., Tigano A; Department of Molecular, Cellular and Biomedical Sciences, University of New Hampshire, Durham, NH, USA.; Department of Biology, Queen's University, Kingston, Ontario, Canada., Friesen V; Department of Biology, Queen's University, Kingston, Ontario, Canada., Dalén L; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden.; Centre for Palaeogenetics, Stockholm, Sweden., Urrutia AO; Milner Centre for Evolution, University of Bath, Bath, UK.; Instituto de Ecologia, UNAM, Mexico City, Mexico., Székely T; Milner Centre for Evolution, University of Bath, Bath, UK., Liu Y; State Key Laboratory of Biocontrol, School of Ecology, Sun Yat-sen University, Guangzhou, China., Campana MG; Center for Conservation Genomics, Smithsonian Conservation Biology Institute, Smithsonian Institution, Washington, DC, USA., Corvelo A; New York Genome Center, New York, NY, USA., Fleischer RC; Center for Conservation Genomics, Smithsonian Conservation Biology Institute, Smithsonian Institution, Washington, DC, USA., Rutherford KM; Department of Anatomy, University of Otago, Dunedin, New Zealand., Gemmell NJ; Department of Anatomy, University of Otago, Dunedin, New Zealand., Dussex N; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden.; Centre for Palaeogenetics, Stockholm, Sweden.; Department of Anatomy, University of Otago, Dunedin, New Zealand., Mouritsen H; AG Neurosensory Sciences, Institut für Biologie und Umweltwissenschaften, University of Oldenburg, Oldenburg, Germany., Thiele N; AG Neurosensory Sciences, Institut für Biologie und Umweltwissenschaften, University of Oldenburg, Oldenburg, Germany., Delmore K; Biology Department, Texas A&M University, College Station, TX, USA.; MPRG Behavioural Genomics, Max Planck Institute for Evolutionary Biology, Plön, Germany., Liedvogel M; MPRG Behavioural Genomics, Max Planck Institute for Evolutionary Biology, Plön, Germany., Franke A; Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany., Hoeppner MP; Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany., Krone O; Department of Wildlife Diseases, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany., Fudickar AM; Environmental Resilience Institute, Indiana University, Bloomington, IN, USA., Milá B; National Museum of Natural Sciences, Spanish National Research Council (CSIC), Madrid, Spain., Ketterson ED; Department of Biology, Indiana University, Bloomington, IN, USA., Fidler AE; Institute of Marine Science, University of Auckland, Auckland, New Zealand., Friis G; Center for Genomics and Systems Biology, Department of Biology, New York University - Abu Dhabi, Abu Dhabi, UAE., Parody-Merino ÁM; Wildlife and Ecology Group, Massey University, Palmerston North, New Zealand., Battley PF; Wildlife and Ecology Group, Massey University, Palmerston North, New Zealand., Cox MP; School of Fundamental Sciences, Massey University, Palmerston North, New Zealand., Lima NCB; Laboratório Nacional de Computação Científica, Petrópolis, Brazil.; Departamento de Bioquímica e Biologia Molecular, Centro de Ciências, Universidade Federal do Ceará, Fortaleza, Brazil., Prosdocimi F; Laboratório de Genômica e Biodiversidade, Instituto de Bioquímica Médica Leopoldo de Meis, Rio de Janeiro, Brazil., Parchman TL; Department of Biology, University of Nevada Reno, Reno, NV, USA., Schlinger BA; Department of Integrative Biology and Physiology, UCLA, Los Angeles, CA, USA.; Smithsonian Tropical Research Institute, Panama City, Panama., Loiselle BA; Department of Wildlife Ecology and Conservation, University of Florida, Gainesville, FL, USA.; Center for Latin American Studies, University of Florida, Gainesville, FL, USA., Blake JG; Department of Wildlife Ecology and Conservation, University of Florida, Gainesville, FL, USA., Lim HC; Center for Conservation Genomics, Smithsonian Conservation Biology Institute, Smithsonian Institution, Washington, DC, USA.; Department of Biology, George Mason University, Fairfax, VA, USA., Day LB; Department of Biology and Neuroscience Minor, University of Mississippi, University, MS, USA., Fuxjager MJ; Department of Ecology and Evolutionary Biology, Brown University, Providence, RI, USA., Baldwin MW; Max Planck Institute for Ornithology, Seewiesen, Germany., Braun MJ; Department of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA.; Behavior, Ecology, Evolution and Systematics Program, University of Maryland, College Park, MD, USA., Wirthlin M; Computational Biology Department, Carnegie Mellon University, Pittsburgh, PA, USA., Dikow RB; Data Science Lab, Office of the Chief Information Officer, Smithsonian Institution, Washington, DC, USA., Ryder TB; Migratory Bird Center, Smithsonian National Zoological Park and Conservation Biology Institute, Washington, DC, USA., Camenisch G; Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland., Keller LF; Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland., DaCosta JM; Biology Department, Boston College, Chestnut Hill, MA, USA., Hauber ME; Department of Evolution, Ecology, and Behavior, School of Integrative Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA., Louder MIM; Department of Biology, East Carolina University, Greenville, NC, USA.; Department of Evolution, Ecology, and Behavior, School of Integrative Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.; International Research Center for Neurointelligence, University of Tokyo, Tokyo, Japan., Witt CC; Museum of Southwestern Biology, Department of Biology, University of New Mexico, Albuquerque, NM, USA., McGuire JA; Museum of Vertebrate Zoology, Department of Integrative Biology, University of California, Berkeley, Berkeley, CA, USA., Mudge J; National Center for Genome Resources, Santa Fe, NM, USA., Megna LC; Department of Zoology and Physiology, University of Wyoming, Laramie, WY, USA., Carling MD; Department of Zoology and Physiology, University of Wyoming, Laramie, WY, USA., Wang B; School of BioSciences, The University of Melbourne, Melbourne, Victoria, Australia., Taylor SA; Department of Ecology and Evolutionary Biology, University of Colorado Boulder, Boulder, CO, USA., Del-Rio G; Museum of Natural Science, Louisiana State University, Baton Rouge, LA, USA., Aleixo A; Finnish Museum of Natural History, University of Helsinki, Helsinki, Finland., Vasconcelos ATR; Laboratório Nacional de Computação Científica, Petrópolis, Brazil., Mello CV; Department of Behavioral Neuroscience, Oregon Health and Science University, Portland, OR, USA., Weir JT; Department of Natural History, Royal Ontario Museum, Toronto, Ontario, Canada.; Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada.; Department of Biological Sciences, University of Toronto Scarborough, Toronto, Ontario, Canada., Haussler D; UC Santa Cruz Genomics Institute, UC Santa Cruz, Santa Cruz, CA, USA., Li Q; China National GeneBank, BGI-Shenzhen, Shenzhen, China.; BGI-Shenzhen, Shenzhen, China., Yang H; BGI-Shenzhen, Shenzhen, China.; James D. Watson Institute of Genome Sciences, Hangzhou, China., Wang J; BGI-Shenzhen, Shenzhen, China., Lei F; Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing, China.; Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming, China., Rahbek C; Center for Macroecology, Evolution, and Climate, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark.; Danish Institute for Advanced Study, University of Southern Denmark, Odense, Denmark.; Institute of Ecology, Peking University, Beijing, China.; Department of Life Sciences, Imperial College London, Ascot, UK., Gilbert MTP; Section for Evolutionary Genomics, The GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.; University Museum, Norwegian University of Science and Technology, Trondheim, Norway., Graves GR; Center for Macroecology, Evolution, and Climate, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark.; Department of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA., Jarvis ED; Duke University Medical Center, Durham, NC, USA.; The Rockefeller University, New York, NY, USA.; Howard Hughes Medical Institute, Chevy Chase, MD, USA., Paten B; UC Santa Cruz Genomics Institute, UC Santa Cruz, Santa Cruz, CA, USA. bpaten@ucsc.edu., Zhang G; China National GeneBank, BGI-Shenzhen, Shenzhen, China. guojie.zhang@bio.ku.dk.; State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China. guojie.zhang@bio.ku.dk.; Villum Centre for Biodiversity Genomics, Section for Ecology and Evolution, Department of Biology, University of Copenhagen, Copenhagen, Denmark. guojie.zhang@bio.ku.dk.; Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming, China. guojie.zhang@bio.ku.dk.

Publikováno v: Nature [Nature] 2020 Nov; Vol. 587 (7833), pp. 252-257. Date of Electronic Publication: 2020 Nov 11.