Target enrichment sequencing coupled with GWAS identifies MdPRX10 as a candidate gene in the control of budbreak in apple.

Autor: Watson AE; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France., Guitton B; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France., Soriano A; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France.; CIRAD, UMR AGAP Institut, Montpellier, France.; French Institute of Bioinformatics (IFB) - South Green Bioinformatics Platform, Bioversity, CIRAD, INRAE, IRD, Montpellier, France., Rivallan R; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France.; CIRAD, UMR AGAP Institut, Montpellier, France., Vignes H; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France.; CIRAD, UMR AGAP Institut, Montpellier, France., Farrera I; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France., Huettel B; Genome Centre, Max Planck Institute for Plant Breeding Research, Cologne, Germany., Arnaiz C; Centro de Biotecnología y Genómica de Plantas, Instituto de Investigación y Tecnología Agraria y Alimentaria, Universidad Politécnica de Madrid, Madrid, Spain., Falavigna VDS; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France., Coupel-Ledru A; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France., Segura V; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France., Sarah G; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France., Dufayard JF; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France.; CIRAD, UMR AGAP Institut, Montpellier, France.; French Institute of Bioinformatics (IFB) - South Green Bioinformatics Platform, Bioversity, CIRAD, INRAE, IRD, Montpellier, France., Sidibe-Bocs S; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France.; CIRAD, UMR AGAP Institut, Montpellier, France.; French Institute of Bioinformatics (IFB) - South Green Bioinformatics Platform, Bioversity, CIRAD, INRAE, IRD, Montpellier, France., Costes E; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France., Andrés F; UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France.

Publikováno v: Frontiers in plant science [Front Plant Sci] 2024 Feb 21; Vol. 15, pp. 1352757. Date of Electronic Publication: 2024 Feb 21 (Print Publication: 2024).

RapGreen, an interactive software and web package to explore and analyze phylogenetic trees.

Autor: Dufayard JF; CIRAD, UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, F-34398 Montpellier, France., Bocs S; CIRAD, UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, F-34398 Montpellier, France., Guignon V; French Institute of Bioinformatics (IFB) - South Green Bioinformatics Platform, Bioversity, CIRAD, INRAE, IRD, F-34398 Montpellier, France., Larivière D; CIRAD, UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, F-34398 Montpellier, France., Louis A; IBENS, Institut de Biologie de l'ENS, Département de biologie, École normale supérieure, CNRS, INSERM, Université PSL, 75005 Paris, France., Oubda N; CIRAD, UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, F-34398 Montpellier, France., Rouard M; French Institute of Bioinformatics (IFB) - South Green Bioinformatics Platform, Bioversity, CIRAD, INRAE, IRD, F-34398 Montpellier, France., Ruiz M; CIRAD, UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, F-34398 Montpellier, France., de Lamotte F; French Institute of Bioinformatics (IFB) - South Green Bioinformatics Platform, Bioversity, CIRAD, INRAE, IRD, F-34398 Montpellier, France.

Publikováno v: NAR genomics and bioinformatics [NAR Genom Bioinform] 2021 Sep 23; Vol. 3 (3), pp. lqab088. Date of Electronic Publication: 2021 Sep 23 (Print Publication: 2021).

Badnaviruses and banana genomes: a long association sheds light on Musa phylogeny and origin.

Autor: Chabannes M; CIRAD, UMR BGPI, University of Montpellier, Montpellier SupAgro, Montpellier, France., Gabriel M; CIRAD, UMR BGPI, University of Montpellier, Montpellier SupAgro, Montpellier, France., Aksa A; CIRAD, UMR BGPI, University of Montpellier, Montpellier SupAgro, Montpellier, France., Galzi S; CIRAD, UMR BGPI, University of Montpellier, Montpellier SupAgro, Montpellier, France., Dufayard JF; CIRAD, UMR AGAP, University of Montpellier, CIRAD, INRA, Montpellier SupAgro, Montpellier, France., Iskra-Caruana ML; CIRAD, UMR BGPI, University of Montpellier, Montpellier SupAgro, Montpellier, France., Muller E; CIRAD, UMR BGPI, University of Montpellier, Montpellier SupAgro, Montpellier, France.

Publikováno v: Molecular plant pathology [Mol Plant Pathol] 2021 Feb; Vol. 22 (2), pp. 216-230. Date of Electronic Publication: 2020 Nov 24.

Transcriptional Regulation of Sorghum Stem Composition: Key Players Identified Through Co-expression Gene Network and Comparative Genomics Analyses.

Autor: Hennet L; CIRAD, UMR AGAP, Montpellier, France.; CIRAD, INRA, Montpellier SupAgro, University of Montpellier, Montpellier, France., Berger A; CIRAD, UMR AGAP, Montpellier, France.; CIRAD, INRA, Montpellier SupAgro, University of Montpellier, Montpellier, France., Trabanco N; Parco Tecnologico Padano, Lodi, Italy.; Centro de Biotecnología y Genómica de Plantas, UPM-INIA, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Madrid, Spain., Ricciuti E; CIRAD, UMR AGAP, Montpellier, France.; CIRAD, INRA, Montpellier SupAgro, University of Montpellier, Montpellier, France., Dufayard JF; CIRAD, UMR AGAP, Montpellier, France.; CIRAD, INRA, Montpellier SupAgro, University of Montpellier, Montpellier, France., Bocs S; CIRAD, UMR AGAP, Montpellier, France.; CIRAD, INRA, Montpellier SupAgro, University of Montpellier, Montpellier, France., Bastianelli D; CIRAD, INRA, Montpellier SupAgro, University of Montpellier, Montpellier, France.; CIRAD, UMR SELMET, Montpellier, France., Bonnal L; CIRAD, INRA, Montpellier SupAgro, University of Montpellier, Montpellier, France.; CIRAD, UMR SELMET, Montpellier, France., Roques S; CIRAD, UMR AGAP, Montpellier, France.; CIRAD, INRA, Montpellier SupAgro, University of Montpellier, Montpellier, France., Rossini L; Parco Tecnologico Padano, Lodi, Italy.; Department of Agricultural and Environmental Sciences - Production, Landscape, Agroenergy, Università degli Studi di Milano, Milan, Italy., Luquet D; CIRAD, UMR AGAP, Montpellier, France.; CIRAD, INRA, Montpellier SupAgro, University of Montpellier, Montpellier, France., Terrier N; AGAP, CIRAD, INRAE, Montpellier SupAgro, University of Montpellier, Montpellier, France., Pot D; CIRAD, UMR AGAP, Montpellier, France.; CIRAD, INRA, Montpellier SupAgro, University of Montpellier, Montpellier, France.

Publikováno v: Frontiers in plant science [Front Plant Sci] 2020 Mar 03; Vol. 11, pp. 224. Date of Electronic Publication: 2020 Mar 03 (Print Publication: 2020).

Corrigendum: New Insights on Leucine-Rich Repeats Receptor-Like Kinase Orthologous Relationships in Angiosperms.

Autor: Dufayard JF; CIRAD, UMR AGAPMontpellier, France., Bettembourg M; CIRAD, UMR AGAPMontpellier, France., Fischer I; INRA, UMR AGAPMontpellier, France., Droc G; CIRAD, UMR AGAPMontpellier, France., Guiderdoni E; CIRAD, UMR AGAPMontpellier, France., Périn C; CIRAD, UMR AGAPMontpellier, France., Chantret N; INRA, UMR AGAPMontpellier, France., Diévart A; CIRAD, UMR AGAPMontpellier, France.

Publikováno v: Frontiers in plant science [Front Plant Sci] 2017 May 24; Vol. 8, pp. 916. Date of Electronic Publication: 2017 May 24 (Print Publication: 2017).