MiDAS 3: An ecosystem-specific reference database, taxonomy and knowledge platform for activated sludge and anaerobic digesters reveals species-level microbiome composition of activated sludge

Autor: Nierychlo, Marta, Andersen, Kasper Skytte, Xu, Yijuan, Green, Nicholas, Jiang, Chenjing, Albertsen, Mads, Dueholm, Morten Simonsen, Nielsen, Per Halkjær

Publikováno v: In Water Research 1 September 2020 182

The New MiDAS Field Guide::Comprehensive Online Ecosystem-specific Database of Microorganisms in Wastewater Treatment Systems

Autor: Hove Hansen, Susan, Nierychlo, Marta Anna, Xu, Yijuan, David Green, Nick, Andersen, Kasper Skytte, Dueholm, Morten Simonsen, Nielsen, Per Halkjær

Publikováno v: Hove Hansen, S, Nierychlo, M A, Xu, Y, David Green, N, Andersen, K S, Dueholm, M S & Nielsen, P H 2020, ' The New MiDAS Field Guide: Comprehensive Online Ecosystem-specific Database of Microorganisms in Wastewater Treatment Systems ', 14th Danish Water Forum: Water Research Conference, Copenhagen, Denmark, 30/01/2020-30/01/2020 .

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::dda08e6345e3caf1fad863fcd3d70174
https://vbn.aau.dk/da/publications/bfabb6cb-b240-4296-98fe-0ffec116ba6d

Trash to treasure:exploring the wastewater system with high quality MAGs from large-scale Nanopore data

Autor: Singleton, Caitlin Margaret, Andersen, Martin Hjorth, Kirkegaard, Rasmus Hansen, Yssing Michaelsen, Thomas, Karst, Søren Michael, Dueholm, Morten Simonsen, Nielsen, Per Halkjær, Albertsen, Mads

Publikováno v: Singleton, C M, Andersen, M H, Kirkegaard, R H, Yssing Michaelsen, T, Karst, S M, Dueholm, M S, Nielsen, P H & Albertsen, M 2019, ' Trash to treasure : exploring the wastewater system with high quality MAGs from large-scale Nanopore data ', Danish Microbiological Society Congress 2019, Copenhagen, Denmark, 11/11/2019-11/11/2019 .

Improvements to wastewater resource recovery and treatment efficiency are essential for fulfilling the UN sustainable development goals for both sustainable cities (goal 11) and responsible production and consumption (goal 12). Microbes are central t

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::39eac0f9f5331a44012cea604f4c05f1
https://vbn.aau.dk/da/publications/f443b15e-35bb-48af-8ffc-5c6c02b6f1c5

Comprehensive ecosystem-specific 16S rRNA gene databases with automated taxonomy assignment (AutoTax) provide species-level resolution in microbial ecology

Autor: Dueholm, Morten Simonsen, Andersen, Kasper Skytte, Petriglieri, Francesca, McIlroy, Simon Jon, Nierychlo, Marta, Petersen, Jette Fisher, Kristensen, Jannie Munk, Yashiro, Erika, Karst, Søren Michael, Albertsen, Mads, Nielsen, Per Halkjær

Publikováno v: Dueholm, M S, Andersen, K S, Petriglieri, F, McIlroy, S J, Nierychlo, M A, Petersen, J F, Kristensen, J M, Yashiro, E, Karst, S M, Albertsen, M & Nielsen, P H 2019, ' Comprehensive ecosystem-specific 16S rRNA gene databases with automated taxonomy assignment (AutoTax) provide species-level resolution in microbial ecology ', bioRxiv . https://doi.org/10.1101/672873

High-throughput 16S rRNA gene amplicon sequencing is an indispensable method for studying the diversity and dynamics of microbial communities. However, this method is presently hampered by the lack of high-identity reference sequences for many enviro

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::74b4c4166925093180df152b1d388592

Global database of microbes in wastewater treatment systems

Autor: Jørgensen, Vibeke Rudkjøbing, Dueholm, Morten Simonsen, Knutsson, Simon, Nierychlo, Marta, Kristensen, Jannie Munk, Petriglieri, Francesca, Dottorini, Giulia, Yashiro, Erika, Karst, Søren Michael, Albertsen, Mads, Nielsen, Per Halkjær

Publikováno v: Jørgensen, V R, Dueholm, M S, Knutsson, S, Nierychlo, M, Kristensen, J M, Petriglieri, F, Dottorini, G, Yashiro, E, Karst, S M, Albertsen, M & Nielsen, P H 2018, ' Global database of microbes in wastewater treatment systems ', 17th International Symposium on Microbial Ecology, Leipzig, Germany, 12/08/2018-17/08/2018 .

Activated sludge is the most commonly applied bioprocess throughout the world for wastewater treatment, and have been used for more than 100 years. Microorganisms are key to the process, but still our knowledge of the microbial identity and function

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::1e1e586852542fbbcc96f638acf8bb81
https://vbn.aau.dk/da/publications/5b285c19-5879-4c2c-ada3-9bfb90dc0fd9