Efficient assembly and long-term stability of defensive microbiomes via private resources and community bistability.

Autor: Gergely Boza, Sarah F Worsley, Douglas W Yu, István Scheuring

Publikováno v: PLoS Computational Biology, Vol 15, Iss 5, p e1007109 (2019)

Understanding the mechanisms that promote the assembly and maintenance of host-beneficial microbiomes is an open problem. Empirical evidence supports the idea that animal and plant hosts can combine 'private resources' with the ecological phenomenon

Externí odkaz: https://doaj.org/article/e538335722f748f0997c476334f2187a

Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA

Autor: Otso Ovaskainen, Nerea Abrego, Brendan Furneaux, Bess Hardwick, Panu Somervuo, Isabella Palorinne, Nigel R. Andrew, Ulyana V. Babiy, Tan Bao, Gisela Bazzano, Svetlana N. Bondarchuk, Timothy C. Bonebrake, Georgina L. Brennan, Syndonia Bret-Harte, Claus Bässler, Luciano Cagnolo, Erin K. Cameron, Elodie Chapurlat, Simon Creer, Luigi P. D’Acqui, Natasha de Vere, Marie-Laure Desprez-Loustau, Michel A. K. Dongmo, Ida B. Dyrholm Jacobsen, Brian L. Fisher, Miguel Flores de Jesus, Gregory S. Gilbert, Gareth W. Griffith, Anna A. Gritsuk, Andrin Gross, Håkan Grudd, Panu Halme, Rachid Hanna, Jannik Hansen, Lars Holst Hansen, Apollon D. M. T. Hegbe, Sarah Hill, Ian D. Hogg, Jenni Hultman, Kevin D. Hyde, Nicole A. Hynson, Natalia Ivanova, Petteri Karisto, Deirdre Kerdraon, Anastasia Knorre, Irmgard Krisai-Greilhuber, Juri Kurhinen, Masha Kuzmina, Nicolas Lecomte, Erin Lecomte, Viviana Loaiza, Erik Lundin, Alexander Meire, Armin Mešić, Otto Miettinen, Norman Monkhause, Peter Mortimer, Jörg Müller, R. Henrik Nilsson, Puani Yannick C. Nonti, Jenni Nordén, Björn Nordén, Claudia Paz, Petri Pellikka, Danilo Pereira, Geoff Petch, Juha-Matti Pitkänen, Flavius Popa, Caitlin Potter, Jenna Purhonen, Sanna Pätsi, Abdullah Rafiq, Dimby Raharinjanahary, Niklas Rakos, Achala R. Rathnayaka, Katrine Raundrup, Yury A. Rebriev, Jouko Rikkinen, Hanna M. K. Rogers, Andrey Rogovsky, Yuri Rozhkov, Kadri Runnel, Annika Saarto, Anton Savchenko, Markus Schlegel, Niels Martin Schmidt, Sebastian Seibold, Carsten Skjøth, Elisa Stengel, Svetlana V. Sutyrina, Ilkka Syvänperä, Leho Tedersoo, Jebidiah Timm, Laura Tipton, Hirokazu Toju, Maria Uscka-Perzanowska, Michelle van der Bank, F. Herman van der Bank, Bryan Vandenbrink, Stefano Ventura, Solvi R. Vignisson, Xiaoyang Wang, Wolfgang W. Weisser, Subodini N. Wijesinghe, S. Joseph Wright, Chunyan Yang, Nourou S. Yorou, Amanda Young, Douglas W. Yu, Evgeny V. Zakharov, Paul D. N. Hebert, Tomas Roslin

Publikováno v: Scientific Data, Vol 11, Iss 1, Pp 1-17 (2024)

Abstract Novel methods for sampling and characterizing biodiversity hold great promise for re-evaluating patterns of life across the planet. The sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested

Externí odkaz: https://doaj.org/article/a665cd3f632448dbad13496c3a4720f6

A single Streptomyces symbiont makes multiple antifungals to support the fungus farming ant Acromyrmex octospinosus.

Autor: Ryan F Seipke, Jörg Barke, Charles Brearley, Lionel Hill, Douglas W Yu, Rebecca J M Goss, Matthew I Hutchings

Publikováno v: PLoS ONE, Vol 6, Iss 8, p e22028 (2011)

Attine ants are dependent on a cultivated fungus for food and use antibiotics produced by symbiotic Actinobacteria as weedkillers in their fungus gardens. Actinobacterial species belonging to the genera Pseudonocardia, Streptomyces and Amycolatopsis

Externí odkaz: https://doaj.org/article/4b26bcf703e942f8b8aacc7fdbeb1318

Interference competition and high temperatures reduce the virulence of fig wasps and stabilize a fig-wasp mutualism.

Autor: Rui-Wu Wang, Jo Ridley, Bao-Fa Sun, Qi Zheng, Derek W Dunn, James Cook, Lei Shi, Ya-Ping Zhang, Douglas W Yu

Publikováno v: PLoS ONE, Vol 4, Iss 11, p e7802 (2009)

Fig trees are pollinated by fig wasps, which also oviposit in female flowers. The wasp larvae gall and eat developing seeds. Although fig trees benefit from allowing wasps to oviposit, because the wasp offspring disperse pollen, figs must prevent was

Externí odkaz: https://doaj.org/article/3d972fb9ed3b46669e91ee81bb7bac3a

The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project

Autor: Lawrence N. Hudson, Tim Newbold, Sara Contu, Samantha L. L. Hill, Igor Lysenko, Adriana De Palma, Helen R. P. Phillips, Tamera I. Alhusseini, Felicity E. Bedford, Dominic J. Bennett, Hollie Booth, Victoria J. Burton, Charlotte W. T. Chng, Argyrios Choimes, David L. P. Correia, Julie Day, Susy Echeverría‐Londoño, Susan R. Emerson, Di Gao, Morgan Garon, Michelle L. K. Harrison, Daniel J. Ingram, Martin Jung, Victoria Kemp, Lucinda Kirkpatrick, Callum D. Martin, Yuan Pan, Gwilym D. Pask‐Hale, Edwin L. Pynegar, Alexandra N. Robinson, Katia Sanchez‐Ortiz, Rebecca A. Senior, Benno I. Simmons, Hannah J. White, Hanbin Zhang, Job Aben, Stefan Abrahamczyk, Gilbert B. Adum, Virginia Aguilar‐Barquero, Marcelo A. Aizen, Belén Albertos, E. L. Alcala, Maria delMar Alguacil, Audrey Alignier, Marc Ancrenaz, Alan N. Andersen, Enrique Arbeláez‐Cortés, Inge Armbrecht, Víctor Arroyo‐Rodríguez, Tom Aumann, Jan C. Axmacher, Badrul Azhar, Adrián B. Azpiroz, Lander Baeten, Adama Bakayoko, András Báldi, John E. Banks, Sharad K. Baral, Jos Barlow, Barbara I. P. Barratt, Lurdes Barrico, Paola Bartolommei, Diane M. Barton, Yves Basset, Péter Batáry, Adam J. Bates, Bruno Baur, Erin M. Bayne, Pedro Beja, Suzan Benedick, Åke Berg, Henry Bernard, Nicholas J. Berry, Dinesh Bhatt, Jake E. Bicknell, Jochen H. Bihn, Robin J. Blake, Kadiri S. Bobo, Roberto Bóçon, Teun Boekhout, Katrin Böhning‐Gaese, Kevin J. Bonham, Paulo A. V. Borges, Sérgio H. Borges, Céline Boutin, Jérémy Bouyer, Cibele Bragagnolo, Jodi S. Brandt, Francis Q. Brearley, Isabel Brito, Vicenç Bros, Jörg Brunet, Grzegorz Buczkowski, Christopher M. Buddle, Rob Bugter, Erika Buscardo, Jörn Buse, Jimmy Cabra‐García, Nilton C. Cáceres, Nicolette L. Cagle, María Calviño‐Cancela, Sydney A. Cameron, Eliana M. Cancello, Rut Caparrós, Pedro Cardoso, Dan Carpenter, Tiago F. Carrijo, Anelena L. Carvalho, Camila R. Cassano, Helena Castro, Alejandro A. Castro‐Luna, Cerda B. Rolando, Alexis Cerezo, Kim Alan Chapman, Matthieu Chauvat, Morten Christensen, Francis M. Clarke, Daniel F.R. Cleary, Giorgio Colombo, Stuart P. Connop, Michael D. Craig, Leopoldo Cruz‐López, Saul A. Cunningham, Biagio D'Aniello, Neil D'Cruze, Pedro Giovâni daSilva, Martin Dallimer, Emmanuel Danquah, Ben Darvill, Jens Dauber, Adrian L. V. Davis, Jeff Dawson, Claudio deSassi, Benoit deThoisy, Olivier Deheuvels, Alain Dejean, Jean‐Louis Devineau, Tim Diekötter, Jignasu V. Dolia, Erwin Domínguez, Yamileth Dominguez‐Haydar, Silvia Dorn, Isabel Draper, Niels Dreber, Bertrand Dumont, Simon G. Dures, Mats Dynesius, Lars Edenius, Paul Eggleton, Felix Eigenbrod, Zoltán Elek, Martin H. Entling, Karen J. Esler, Ricardo F. deLima, Aisyah Faruk, Nina Farwig, Tom M. Fayle, Antonio Felicioli, Annika M. Felton, Roderick J. Fensham, Ignacio C. Fernandez, Catarina C. Ferreira, Gentile F. Ficetola, Cristina Fiera, Bruno K. C. Filgueiras, Hüseyin K. Fırıncıoğlu, David Flaspohler, Andreas Floren, Steven J. Fonte, Anne Fournier, Robert E. Fowler, Markus Franzén, Lauchlan H. Fraser, Gabriella M. Fredriksson, Geraldo B. Freire Jr, Tiago L. M. Frizzo, Daisuke Fukuda, Dario Furlani, René Gaigher, Jörg U. Ganzhorn, Karla P. García, Juan C. Garcia‐R, Jenni G. Garden, Ricardo Garilleti, Bao‐Ming Ge, Benoit Gendreau‐Berthiaume, Philippa J. Gerard, Carla Gheler‐Costa, Benjamin Gilbert, Paolo Giordani, Simonetta Giordano, Carly Golodets, Laurens G. L. Gomes, Rachelle K. Gould, Dave Goulson, Aaron D. Gove, Laurent Granjon, Ingo Grass, Claudia L. Gray, James Grogan, Weibin Gu, Moisès Guardiola, Nihara R. Gunawardene, Alvaro G. Gutierrez, Doris L. Gutiérrez‐Lamus, Daniela H. Haarmeyer, Mick E. Hanley, Thor Hanson, Nor R. Hashim, Shombe N. Hassan, Richard G. Hatfield, Joseph E. Hawes, Matt W. Hayward, Christian Hébert, Alvin J. Helden, John‐André Henden, Philipp Henschel, Lionel Hernández, James P. Herrera, Farina Herrmann, Felix Herzog, Diego Higuera‐Diaz, Branko Hilje, Hubert Höfer, Anke Hoffmann, Finbarr G. Horgan, Elisabeth Hornung, Roland Horváth, Kristoffer Hylander, Paola Isaacs‐Cubides, Hiroaki Ishida, Masahiro Ishitani, Carmen T. Jacobs, Víctor J. Jaramillo, Birgit Jauker, F. Jiménez Hernández, McKenzie F. Johnson, Virat Jolli, Mats Jonsell, S. Nur Juliani, Thomas S. Jung, Vena Kapoor, Heike Kappes, Vassiliki Kati, Eric Katovai, Klaus Kellner, Michael Kessler, Kathryn R. Kirby, Andrew M. Kittle, Mairi E. Knight, Eva Knop, Florian Kohler, Matti Koivula, Annette Kolb, Mouhamadou Kone, Ádám Kőrösi, Jochen Krauss, Ajith Kumar, Raman Kumar, David J. Kurz, Alex S. Kutt, Thibault Lachat, Victoria Lantschner, Francisco Lara, Jesse R. Lasky, Steven C. Latta, William F. Laurance, Patrick Lavelle, Violette Le Féon, Gretchen LeBuhn, Jean‐Philippe Légaré, Valérie Lehouck, María V. Lencinas, Pia E. Lentini, Susan G. Letcher, Qi Li, Simon A. Litchwark, Nick A. Littlewood, Yunhui Liu, Nancy Lo‐Man‐Hung, Carlos A. López‐Quintero, Mounir Louhaichi, Gabor L. Lövei, Manuel Esteban Lucas‐Borja, Victor H. Luja, Matthew S. Luskin, M Cristina MacSwiney G, Kaoru Maeto, Tibor Magura, Neil Aldrin Mallari, Louise A. Malone, Patrick K. Malonza, Jagoba Malumbres‐Olarte, Salvador Mandujano, Inger E. Måren, Erika Marin‐Spiotta, Charles J. Marsh, E. J. P. Marshall, Eliana Martínez, Guillermo Martínez Pastur, David Moreno Mateos, Margaret M. Mayfield, Vicente Mazimpaka, Jennifer L. McCarthy, Kyle P. McCarthy, Quinn S. McFrederick, Sean McNamara, Nagore G. Medina, Rafael Medina, Jose L. Mena, Estefania Mico, Grzegorz Mikusinski, Jeffrey C. Milder, James R. Miller, Daniel R. Miranda‐Esquivel, Melinda L. Moir, Carolina L. Morales, Mary N. Muchane, Muchai Muchane, Sonja Mudri‐Stojnic, A. Nur Munira, Antonio Muoñz‐Alonso, B. F. Munyekenye, Robin Naidoo, A. Naithani, Michiko Nakagawa, Akihiro Nakamura, Yoshihiro Nakashima, Shoji Naoe, Guiomar Nates‐Parra, Dario A. Navarrete Gutierrez, Luis Navarro‐Iriarte, Paul K. Ndang'ang'a, Eike L. Neuschulz, Jacqueline T. Ngai, Violaine Nicolas, Sven G. Nilsson, Norbertas Noreika, Olivia Norfolk, Jorge Ari Noriega, David A. Norton, Nicole M. Nöske, A. Justin Nowakowski, Catherine Numa, Niall O'Dea, Patrick J. O'Farrell, William Oduro, Sabine Oertli, Caleb Ofori‐Boateng, Christopher Omamoke Oke, Vicencio Oostra, Lynne M. Osgathorpe, Samuel Eduardo Otavo, Navendu V. Page, Juan Paritsis, Alejandro Parra‐H, Luke Parry, Guy Pe'er, Peter B. Pearman, Nicolás Pelegrin, Raphaël Pélissier, Carlos A. Peres, Pablo L. Peri, Anna S. Persson, Theodora Petanidou, Marcell K. Peters, Rohan S. Pethiyagoda, Ben Phalan, T. Keith Philips, Finn C. Pillsbury, Jimmy Pincheira‐Ulbrich, Eduardo Pineda, Joan Pino, Jaime Pizarro‐Araya, A. J. Plumptre, Santiago L. Poggio, Natalia Politi, Pere Pons, Katja Poveda, Eileen F. Power, Steven J. Presley, Vânia Proença, Marino Quaranta, Carolina Quintero, Romina Rader, B. R. Ramesh, Martha P. Ramirez‐Pinilla, Jai Ranganathan, Claus Rasmussen, Nicola A. Redpath‐Downing, J. Leighton Reid, Yana T. Reis, José M. Rey Benayas, Juan Carlos Rey‐Velasco, Chevonne Reynolds, Danilo Bandini Ribeiro, Miriam H. Richards, Barbara A. Richardson, Michael J. Richardson, Rodrigo Macip Ríos, Richard Robinson, Carolina A. Robles, Jörg Römbke, Luz Piedad Romero‐Duque, Matthias Rös, Loreta Rosselli, Stephen J. Rossiter, Dana S. Roth, T'ai H. Roulston, Laurent Rousseau, André V. Rubio, Jean‐Claude Ruel, Jonathan P. Sadler, Szabolcs Sáfián, Romeo A. Saldaña‐Vázquez, Katerina Sam, Ulrika Samnegård, Joana Santana, Xavier Santos, Jade Savage, Nancy A. Schellhorn, Menno Schilthuizen, Ute Schmiedel, Christine B. Schmitt, Nicole L. Schon, Christof Schüepp, Katharina Schumann, Oliver Schweiger, Dawn M. Scott, Kenneth A. Scott, Jodi L. Sedlock, Steven S. Seefeldt, Ghazala Shahabuddin, Graeme Shannon, Douglas Sheil, Frederick H. Sheldon, Eyal Shochat, Stefan J. Siebert, Fernando A. B. Silva, Javier A. Simonetti, Eleanor M. Slade, Jo Smith, Allan H. Smith‐Pardo, Navjot S. Sodhi, Eduardo J. Somarriba, Ramón A. Sosa, Grimaldo Soto Quiroga, Martin‐Hugues St‐Laurent, Brian M. Starzomski, Constanti Stefanescu, Ingolf Steffan‐Dewenter, Philip C. Stouffer, Jane C. Stout, Ayron M. Strauch, Matthew J. Struebig, Zhimin Su, Marcela Suarez‐Rubio, Shinji Sugiura, Keith S. Summerville, Yik‐Hei Sung, Hari Sutrisno, Jens‐Christian Svenning, Tiit Teder, Caragh G. Threlfall, Anu Tiitsaar, Jacqui H. Todd, Rebecca K. Tonietto, Ignasi Torre, Béla Tóthmérész, Teja Tscharntke, Edgar C. Turner, Jason M. Tylianakis, Marcio Uehara‐Prado, Nicolas Urbina‐Cardona, Denis Vallan, Adam J. Vanbergen, Heraldo L. Vasconcelos, Kiril Vassilev, Hans A. F. Verboven, Maria João Verdasca, José R. Verdú, Carlos H. Vergara, Pablo M. Vergara, Jort Verhulst, Massimiliano Virgilio, Lien Van Vu, Edward M. Waite, Tony R. Walker, Hua‐Feng Wang, Yanping Wang, James I. Watling, Britta Weller, Konstans Wells, Catrin Westphal, Edward D. Wiafe, Christopher D. Williams, Michael R. Willig, John C. Z. Woinarski, Jan H. D. Wolf, Volkmar Wolters, Ben A. Woodcock, Jihua Wu, Joseph M. Wunderle Jr, Yuichi Yamaura, Satoko Yoshikura, Douglas W. Yu, Andrey S. Zaitsev, Juliane Zeidler, Fasheng Zou, Ben Collen, Rob M. Ewers, Georgina M. Mace, Drew W. Purves, Jörn P. W. Scharlemann, Andy Purvis

Publikováno v: Ecology and Evolution, Vol 7, Iss 1, Pp 145-188 (2017)

Abstract The PREDICTS project—Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (https://www.nhm.ac.uk/our-science/our-work/biodiversity/predicts.html)—has collated from published studies a large, reasonably representat

Externí odkaz: https://doaj.org/article/94125e2537a84b7c96f940e7a439ebf5