Zobrazeno 1 - 10
of 54
pro vyhledávání: '"Douglas B Murray"'
Publikováno v:
Frontiers in Cell and Developmental Biology, Vol 2 (2014)
Oscillations play a significant role in biological systems, with many examples in the fast, ultradian, circadian, circalunar and yearly time domains. However, determining periodicity in such data can be problematic. There are a number of computationa
Externí odkaz:
https://doaj.org/article/7ecccd7cc411451faf8bb51ec1933ed1
Autor:
Rainer Machné, Douglas B Murray
Publikováno v:
PLoS ONE, Vol 7, Iss 6, p e37906 (2012)
When grown in continuous culture, budding yeast cells tend to synchronize their respiratory activity to form a stable oscillation that percolates throughout cellular physiology and involves the majority of the protein-coding transcriptome. Oscillatio
Externí odkaz:
https://doaj.org/article/7dd41bb1ac34499b8fb963aed433082d
Publikováno v:
PLoS ONE, Vol 7, Iss 8, p e44283 (2012)
There is an increasing call for the absolute quantification of time-resolved metabolite data. However, a number of technical issues exist, such as metabolites being modified/degraded either chemically or enzymatically during the extraction process. A
Externí odkaz:
https://doaj.org/article/3eabe7ee18dd45d4871eee40b6d7d80f
Autor:
Miguel A Aon, Marc R Roussel, Sonia Cortassa, Brian O'Rourke, Douglas B Murray, Manfred Beckmann, David Lloyd
Publikováno v:
PLoS ONE, Vol 3, Iss 11, p e3624 (2008)
Temporal organization of biological processes requires massively parallel processing on a synchronized time-base. We analyzed time-series data obtained from the bioenergetic oscillatory outputs of Saccharomyces cerevisiae and isolated cardiomyocytes
Externí odkaz:
https://doaj.org/article/3e48fb96feaf448d9af5cd5b5c82a82b
Autor:
Halima Saker, Rainer Machné, Jörg Fallmann, Douglas B. Murray, Ahmad M. Shahin, Peter F. Stadler
Publikováno v:
Computation, Vol 9, Iss 2, p 17 (2021)
The problem of segmenting linearly ordered data is frequently encountered in time-series analysis, computational biology, and natural language processing. Segmentations obtained independently from replicate data sets or from the same data with differ
Externí odkaz:
https://doaj.org/article/807892d311304fffaf40759d797a2138
Metabolic self-synchronization in yeast cultures highlights significant gaps in our understanding of fundamental cellular processes. The oscillation percolates throughout cellular physiology, and the transcriptome oscillates between expression of gen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d55fc0dbefe28a3e3c7a81315eff9d5f
https://doi.org/10.1101/2021.05.26.444658
https://doi.org/10.1101/2021.05.26.444658
Publikováno v:
Scientific Reports
The segmentation of time series and genomic data is a common problem in computational biology. With increasingly complex measurement procedures individual data points are often not just numbers or simple vectors in which all components are of the sam
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::708e9c5375bb08aad23c53e8c8680436
https://pubmed.ncbi.nlm.nih.gov/28955039
https://pubmed.ncbi.nlm.nih.gov/28955039
Autor:
Naoki Irie, Akira Funahashi, Akatsuki Kimura, Rinshi S. Kasai, Hiroaki Takagi, Douglas B. Murray, T. Kobayashi, Ziya Kalay, Viji M. Draviam, Jason E. Shoemaker, Noriko Hiroi, Chun-Biu Li
Publikováno v:
Frontiers Research Topics ISBN: 9782889452132
Quantitative Biology: Dynamics of Living Systems
Quantitative Biology: Dynamics of Living Systems
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::26716cba15d4f2a6dda6f39f484bc0c4
https://doi.org/10.3389/978-2-88945-213-2
https://doi.org/10.3389/978-2-88945-213-2
Autor:
Tomoyoshi Soga, Cornelia Amariei, Viktor Stolc, Masaru Tomita, Douglas B. Murray, Rainer Machné
Publikováno v:
Microbial Cell, Vol 1, Iss 9, Pp 279-288 (2014)
Microbial Cell
Microbial Cell
The structural dynamics of chromatin have been implicated in the regulation of fundamental eukaryotic processes, such as DNA transcription, replication and repair. Although previous studies have revealed that the chromatin landscape, nucleosome remod
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::623adb1204738699b27a609a0adafb68
https://doi.org/10.15698/mic2014.09.166
https://doi.org/10.15698/mic2014.09.166