Zobrazeno 1 - 10
of 17
pro vyhledávání: '"Doug Hyatt"'
Autor:
John Lagergren, Mirko Pavicic, Hari B. Chhetri, Larry M. York, Doug Hyatt, David Kainer, Erica M. Rutter, Kevin Flores, Jack Bailey-Bale, Marie Klein, Gail Taylor, Daniel Jacobson, Jared Streich
Publikováno v:
Plant Phenomics, Vol 5 (2023)
Plant phenotyping is typically a time-consuming and expensive endeavor, requiring large groups of researchers to meticulously measure biologically relevant plant traits, and is the main bottleneck in understanding plant adaptation and the genetic arc
Externí odkaz:
https://doaj.org/article/567a832385d94c30a3760d676a939229
Autor:
Benjamin J. Garcia, Ramanuja Simha, Michael Garvin, Anna Furches, Piet Jones, Joao G.F.M. Gazolla, P. Doug Hyatt, Christopher W. Schadt, Dale Pelletier, Daniel Jacobson
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 19, Iss , Pp 5911-5919 (2021)
Viruses are an underrepresented taxa in the study and identification of microbiome constituents; however, they play an essential role in health, microbiome regulation, and transfer of genetic material. Only a few thousand viruses have been isolated,
Externí odkaz:
https://doaj.org/article/b599a83ec0684751996935f86258cd20
Autor:
Michael R. Garvin, P. Doug Hyatt, Anna Furches, Daniel Jacobson, Joao G.F.M. Gazolla, Christopher W. Schadt, Ramanuja Simha, Benjamin J. Garcia, Piet Jones, Dale A. Pelletier
Publikováno v:
Computational and Structural Biotechnology Journal
Computational and Structural Biotechnology Journal, Vol 19, Iss, Pp 5911-5919 (2021)
Computational and Structural Biotechnology Journal, Vol 19, Iss, Pp 5911-5919 (2021)
Graphical abstract
Viruses are an underrepresented taxa in the study and identification of microbiome constituents; however, they play an essential role in health, microbiome regulation, and transfer of genetic material. Only a few thousand viru
Viruses are an underrepresented taxa in the study and identification of microbiome constituents; however, they play an essential role in health, microbiome regulation, and transfer of genetic material. Only a few thousand viru
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::691c3b9f4c45dd0007e786b3f9f9240f
http://europepmc.org/articles/PMC8605058
http://europepmc.org/articles/PMC8605058
Autor:
Michael R. Garvin, Ramanuja Simha, Daniel Jacobson, Joao Gabriel Felipe Machado Gazolla, Christopher W. Schadt, Anna Furches, Benjamin J. Garcia, Dale A. Pelletier, P. Doug Hyatt, Piet Jones
BackgroundViruses are an underrepresented taxa in the study and identification of microbiome constituents; however, they play an essential role in health, microbiome regulation, and transfer of genetic material. Only a few thousand viruses have been
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2bb96533c5edec62e4463e37c97867e3
https://doi.org/10.21203/rs.3.rs-52940/v1
https://doi.org/10.21203/rs.3.rs-52940/v1
Publikováno v:
Current protocols in microbiology. 51(1)
As a leading cause of bacterial-derived gastroenteritis worldwide, Campylobacter has a significant impact on human health. In the developed world, most campylobacteriosis cases are attributed to the consumption of undercooked, contaminated poultry; h
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::13e03c9af007f7c5a5d163c32e5166db
https://pubmed.ncbi.nlm.nih.gov/30369079
https://pubmed.ncbi.nlm.nih.gov/30369079
Autor:
Nancy L. Engle, Timothy J. Tschaplinski, Dawn M. Klingeman, Miguel J. Rodriguez, Steven D. Brown, Doug Hyatt, Daehwan Chung, Kyle B. Sander, Janet Westpheling, Brian H. Davison
Publikováno v:
MicrobiologyOpen
Rex is a global redox‐sensing transcription factor that senses and responds to the intracellular [NADH]/[NAD +] ratio to regulate genes for central metabolism, and a variety of metabolic processes in Gram‐positive bacteria. We decipher and valida
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fb9b633037b89048e274a4e241b17f13
https://doi.org/10.1002/mbo3.639
https://doi.org/10.1002/mbo3.639
Publikováno v:
Bioinformatics. 28:2223-2230
Motivation: Gene prediction in metagenomic sequences remains a difficult problem. Current sequencing technologies do not achieve sufficient coverage to assemble the individual genomes in a typical sample; consequently, sequencing runs produce a large
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5c233a6eef4ee0953cfabd84f9f72870
https://doi.org/10.1093/bioinformatics/bts429
https://doi.org/10.1093/bioinformatics/bts429
Autor:
Doug Hyatt, Chongle Pan
Publikováno v:
Bioinformatics. 28:1895-1901
Motivation: Amino acid mutations in proteins can be found by searching tandem mass spectra acquired in shotgun proteomics experiments against protein sequences predicted from genomes. Traditionally, unconstrained searches for amino acid mutations hav
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cbe655dae5d853b58f3aa5306edc47c1
https://doi.org/10.1093/bioinformatics/bts274
https://doi.org/10.1093/bioinformatics/bts274
Publikováno v:
BMC Evolutionary Biology
Background Phylogenetic studies have provided detailed knowledge on the evolutionary mechanisms of genes and species in Bacteria and Archaea. However, the evolution of cellular functions, represented by metabolic pathways and biological processes, ha
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::094d8e542f49df2cb72e9448d5da8a2e
http://europepmc.org/articles/PMC4194380
http://europepmc.org/articles/PMC4194380
Autor:
Brian D. Dill, Gregory J. Dick, Luis R. Comolli, Nathan C Verberkmoes, Brett J. Baker, Robert L. Hettich, Jillian F. Banfield, Doug Hyatt, Miriam Land, Loren Hauser
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America. 107(19)
Metagenomics has provided access to genomes of as yet uncultivated microorganisms in natural environments, yet there are gaps in our knowledge—particularly for Archaea—that occur at relatively low abundance and in extreme environments. Ultrasmall
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a3814492d0742c09a04f559e42da5a5b
https://pubmed.ncbi.nlm.nih.gov/20421484
https://pubmed.ncbi.nlm.nih.gov/20421484