Výsledky vyhledávání - "Dorte Meldrup"

Fishing for DNA? Designing baits for population genetics in target enrichment experiments: Guidelines, considerations and the new tool supeRbaits

Autor: Janette Edson, Dorte Meldrup, Snæbjörn Pálsson, Hugo Flávio, Einar Eg Nielsen, Guðbjörg Ásta Ólafsdóttir, Romina Henriques, Miguel Ramos, Belen Jimenez Mena, Jennifer R. Ovenden, Alice Manuzzi

Publikováno v: Jiménez-Mena, B, Flávio, H, Henriques, R, Manuzzi, A, Ramos, M, Meldrup, D, Edson, J, Pálsson, S, Ólafsdóttir, G Á, Ovenden, J R & Nielsen, E E 2022, ' Fishing for DNA? Designing baits for population genetics in target enrichment experiments: guidelines, considerations and the new tool supeRbaits ', Molecular Ecology Resources, vol. 22, no. 5, pp. 2105-2119 . https://doi.org/10.1111/1755-0998.13598

Targeted sequencing is an increasingly popular Next Generation Sequencing (NGS) approach for studying populations, through focusing sequencing efforts on specific parts of the genome of a species of interest. Methodologies and tools for designing tar

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2955032a5487974e6cd08fc93928c412
https://doi.org/10.1111/1755-0998.13598

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Come together: calibration of tiger shark (Galeocerdo cuvier) microsatellite databases for investigating global population structure and assignment of historical specimens

Autor: Belén Jiménez-Mena, B J Holmes, Alice Manuzzi, Einar Eg Nielsen, Dorte Meldrup, Matilde Sort, Michael B. Bennett, Jennifer R. Ovenden, Mahmood S. Shivji, Andrea M. Bernard

Publikováno v: Conservation Genetics Resources. 13:209-220

This study provides the first standardized global microsatellite database for a shark species, the tiger shark (Galeocerdo cuvier). Genotyping of reference individuals was used to develop and apply a calibration key for data from eight microsatellite

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::d1911e89acd883fb4c4c3dc6588be51b
https://doi.org/10.1007/s12686-021-01197-5

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A microsatellite baseline for genetic stock identification of European Atlantic salmon (Salmo salar L.)

Publikováno v: Gilbey, J, Coughlan, J, Wennevik, V, Prodöhl, P, Stevens, J R, Garcia De Leaniz, C, Ensing, D, Cauwelier, E, Cherbonnel, C, Consuegra, S, Coulson, M W, Cross, T F, Crozier, W, Dillane, E, Ellis, J S, García-Vázquez, E, Griffiths, A M, Gudjonsson, S, Hindar, K, Karlsson, S, Knox, D, Machado-Schiaffino, G, Meldrup, D, Eg Nielsen, E, Ólafsson, K, Primmer, C R, Prusov, S, Stradmeyer, L, Vähä, J P, Veselov, A J, Webster, L M I, McGinnity, P & Verspoor, E 2018, ' A microsatellite baseline for genetic stock identification of European Atlantic salmon (Salmo salar L.) ', ICES Journal of Marine Science, vol. 75, no. 2, pp. 662-674 . https://doi.org/10.1093/icesjms/fsx184

Atlantic salmon (Salmo salar L.) populations from different river origins mix in the North Atlantic during the marine life stage. To facilitate marine stock identification, we developed a genetic baseline covering the European component of the specie

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::adb1d184d295a4ba1ec05fd5ed4c5c67
http://juuli.fi/Record/0330514018

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Conserving marine biodiversity: insights from life-history trait candidate genes in Atlantic cod (Gadus morhua)

Autor: Nina Overgaard Therkildsen, Dorte Meldrup, Einar Eg Nielsen, Jakob Hemmer-Hansen

Publikováno v: Conservation Genetics. 15:213-228

Recent technological developments have facilitated an increased focus on identifying genomic regions underlying adaptive trait variation in natural populations, and it has been advocated that this information should be important for designating popul

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::634912329adb309c697b7a7d4be3bf55
https://doi.org/10.1007/s10592-013-0532-5

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Microevolution in time and space: SNP analysis of historical DNA reveals dynamic signatures of selection in Atlantic cod

Autor: Edward A. Trippel, Thomas Damm Als, Einar Eg Nielsen, Nina Overgaard Therkildsen, Dorte Meldrup, Stephen R. Palumbi, Douglas P. Swain, M. Joanne Morgan, Jakob Hemmer-Hansen

Publikováno v: Therkildsen, N O, Hemmer-Hansen, J, Als, T D, Swain, D P, Morgan, M J, Trippel, E A, Palumbi, S R, Meldrup, D & Nielsen, E E 2013, ' Microevolution in time and space : SNP analysis of historical DNA reveals dynamic signatures of selection in Atlantic cod ', Molecular Ecology, vol. 22, no. 9, pp. 2424-2440 . https://doi.org/10.1111/mec.12260

Little is known about how quickly natural populations adapt to changes in their environment and how temporal and spatial variation in selection pressures interact to shape patterns of genetic diversity. We here address these issues with a series of g

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e7d06cfbf64f035a965be7fbe56a8647
https://doi.org/10.1111/mec.12260

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Spatiotemporal SNP analysis reveals pronounced biocomplexity at the northern range margin ofAtlantic codGadus morhua

Autor: Anja Retzel, Steffen M. Olsen, Dorte Meldrup, Jakob Hemmer-Hansen, Nina Overgaard Therkildsen, Mary S. Wisz, Einar Eg Nielsen, Sara Bonanomi, Rasmus Hedeholm, Christophe Pampoulie

Publikováno v: Therkildsen, N O, Hemmer-Hansen, J, Meldrup, D, Bonanomi, S, Nielsen, E E, Hedeholm, R B, Wisz, M S, Olsen, S M, Retzel, A & Pampoulie, C 2013, ' Spatiotemporal SNP analysis reveals pronounced biocomplexity at the northern range margin of Atlantic cod Gadus morhua ', Evolutionary Applications, vol. 6, no. 4, pp. 690-705 . https://doi.org/10.1111/eva.12055
Therkildsen, N O, Hansen, J H, Hedeholm, R B, Wisz, M, Pampoulie, C, Meldrup, D, Bonanomi, S, Retzel, A, Olsen, S M & Eg Nielsen, E 2013, ' Spatiotemporal SNP analysis reveals pronounced biocomplexity at the northern range margin of Atlantic cod Gadus morhua ', Evolutionary Applications (Online), vol. 6, no. 4, pp. 690-705 . https://doi.org/10.1111/eva.12055
Evolutionary Applications

Accurate prediction of species distribution shifts in the face of climate change requires a sound understanding of population diversity and local adaptations. Previous modeling has suggested that global warming will lead to increased abundance of Atl

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4e36613cb819bdbde5fdd2b00b4ec39d
https://doi.org/10.1111/eva.12055

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Identification of single nucleotide polymorphisms in candidate genes for growth and reproduction in a nonmodel organism; the Atlantic cod,Gadus morhua

Autor: Christian Mittelholzer, Einar Eg Nielsen, Dorte Meldrup, Jakob Hemmer-Hansen

Publikováno v: Molecular Ecology Resources. 11:71-80

Recent technological developments have facilitated intensified searches for genetic markers under selection in nonmodel species. Here, we present an approach for the identification of candidate gene variation in nonmodel organisms. We report on the c

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::c4057a406605e21ac16ce2d6ca18f1d3
https://doi.org/10.1111/j.1755-0998.2010.02940.x

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Does DNA extraction affect the physical and chemical composition of historical cod (Gadus morhua) otoliths?

Autor: Einar Eg Nielsen, Dorte Meldrup, Karin Hüssy, Audrey J. Geffen, Nina Overgaard Therkildsen

Publikováno v: ICES Journal of Marine Science. 67:1251-1259

Therkildsen, N. O., Nielsen, E. E., Hüssy, K., Meldrup, D., and Geffen, A. J. 2010. Does DNA extraction affect the physical and chemical composition of historical cod (Gadus morhua) otoliths? – ICES Journal of Marine Science, 67: 1251–1259. Arch

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https://doi.org/10.1093/icesjms/fsq016

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Microgeographical population structure of cod Gadus morhua in the North Sea and west of Scotland: the role of sampling loci and individuals

Autor: Peter J. Wright, Jakob Hemmer-Hansen, Dorte Meldrup, Iain M. Gibb, Nina Aagaard Poulsen, Einar Eg Nielsen

Publikováno v: Marine Ecology Progress Series. 376:213-225

We investigated potential microgeographical population structure among spatial and temporal samples of cod Gadus morhua L., collected in the northern North Sea and around Scotland, using microsatellite genetic markers. Results were highly dependent o

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::43aa36e51206e1fdc1d354904206baab
https://doi.org/10.3354/meps07798

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Historical analysis ofPanI in Atlantic cod (Gadus morhua): temporal stability of allele frequencies in the southeastern part of the species distribution

Autor: Eydfinn Magnussen, Dorte Meldrup, Brian R. MacKenzie, Einar Eg Nielsen

Publikováno v: Canadian Journal of Fisheries and Aquatic Sciences. 64:1448-1455

We investigated temporal genetic differentiation at the pantophysin (Pan I) locus in four Atlantic cod (Gadus morhua) populations from the southeastern part of the species distribution: the Baltic Sea, the North Sea, the Faroe Plateau, and the Faroe

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::e6dfc82b71c25bf879122d8162e1eeef
https://doi.org/10.1139/f07-104

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