Zobrazeno 1 - 9
of 9
pro vyhledávání: '"Dmitri, Pervouchine"'
Publikováno v:
PeerJ, Vol 11, p e16414 (2023)
RNA structure has been increasingly recognized as a critical player in the biogenesis and turnover of many transcripts classes. In eukaryotes, the prediction of RNA structure by thermodynamic modeling meets fundamental limitations due to the large si
Externí odkaz:
https://doaj.org/article/e7f89dc0c5244236847f7ae30ef3282f
Autor:
Svetlana Kalmykova, Marina Kalinina, Stepan Denisov, Alexey Mironov, Dmitry Skvortsov, Roderic Guigó, Dmitri Pervouchine
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-17 (2021)
Functional RNA secondary structure is important for the pre-mRNA processing including splicing, cleavage and polyadenylation, and RNA editing. Here the authors present a catalog of conserved long-range RNA structures in the human transcriptome by def
Externí odkaz:
https://doaj.org/article/1ad52ce1c1dc4d7a87afa84114c6aa3c
Autor:
Pedro G. Ferreira, Manuel Muñoz-Aguirre, Ferran Reverter, Caio P. Sá Godinho, Abel Sousa, Alicia Amadoz, Reza Sodaei, Marta R. Hidalgo, Dmitri Pervouchine, Jose Carbonell-Caballero, Ramil Nurtdinov, Alessandra Breschi, Raziel Amador, Patrícia Oliveira, Cankut Çubuk, João Curado, François Aguet, Carla Oliveira, Joaquin Dopazo, Michael Sammeth, Kristin G. Ardlie, Roderic Guigó
Publikováno v:
Nature Communications, Vol 9, Iss 1, Pp 1-15 (2018)
RNA levels in post-mortem tissue can differ greatly from those before death. Studying the effect of post-mortem interval on the transcriptome in 36 human tissues, Ferreira et al. find that the response to death is largely tissue-specific and develop
Externí odkaz:
https://doaj.org/article/13343239598e4a75b47fcf977d2aa96c
Supplementary Data Files for the paper "Transcriptome analysis reveals high tumor heterogeneity with respect to re-activation of stemness and proliferation programs" Abstract: Significant alterations in signaling pathways and transcriptional regulato
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d17f4ba7977ee82ae5b735714afb774c
Autor:
Dmitri Pervouchine
This repository contains the data forhttps://github.com/pervouchine/nmdnar pipeline published along with "Integrative transcriptomic analysis suggests new autoregulatory splicing events coupled with nonsense-mediated mRNA decay" byDmitri Pervouchine,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od______2659::f32271ad7daebfbbf2a8c1d588b533fd
https://zenodo.org/record/8093685
https://zenodo.org/record/8093685
Autor:
Charles A, Steward, Jolien, Roovers, Marie-Marthe, Suner, Jose M, Gonzalez, Barbara, Uszczynska-Ratajczak, Dmitri, Pervouchine, Stephen, Fitzgerald, Margarida, Viola, Hannah, Stamberger, Fadi F, Hamdan, Berten, Ceulemans, Patricia, Leroy, Caroline, Nava, Anne, Lepine, Electra, Tapanari, Don, Keiller, Stephen, Abbs, Alba, Sanchis-Juan, Detelina, Grozeva, Anthony S, Rogers, Mark, Diekhans, Roderic, Guigó, Robert, Petryszak, Berge A, Minassian, Gianpiero, Cavalleri, Dimitrios, Vitsios, Slavé, Petrovski, Jennifer, Harrow, Paul, Flicek, F, Lucy Raymond, Nicholas J, Lench, Peter De, Jonghe, Jonathan M, Mudge, Sarah, Weckhuysen, Sanjay M, Sisodiya, Adam, Frankish
Publikováno v:
NPJ Genomic Medicine
The developmental and epileptic encephalopathies (DEE) are a group of rare, severe neurodevelopmental disorders, where even the most thorough sequencing studies leave 60–65% of patients without a molecular diagnosis. Here, we explore the incomplete
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::ed837732110def8ffe866152d0c3c556
https://pubmed.ncbi.nlm.nih.gov/31814998
https://pubmed.ncbi.nlm.nih.gov/31814998