Zobrazeno 1 - 10
of 164
pro vyhledávání: '"Dinger ME"'
Autor:
McCabe, MJ, Gauthier, MEA, Chan, CL, Thompson, TJ, De Sousa, SMC, Puttick, C, Grady, JP, Gayevskiy, V, Tao, J, Ying, K, Cipponi, A, Deng, N, Swarbrick, A, Thomas, ML, Lord, RV, Johns, AL, Kohonen-Corish, M, O’Toole, SA, Clark, J, Mueller, SA, Gupta, R, McCormack, AI, Dinger, ME, Cowley, MJ, Aghmesheh, M, Amor, D, Andrews, L, Antill, Y, Armitage, S, Arnold, L, Balleine, R, Bastick, P, Beesley, J, Beilby, J, Bennett, I, Blackburn, A, Bogwitz, M, Botes, L, Brennan, M, Brown, M, Buckley, M, Burgess, M, Burke, J, Butow, P, Caldon, L, Callen, D, Campbell, I, Chauhan, D, Chauhan, M, Chenevix-Trench, G, Christian, A, Clarke, C, Cohen, P, Colley, A, Crook, A, Cui, J, Culling, B, Cummings, M, Dawson, SJ, deFazio, A, Delatycki, M, Dickson, R, Dixon, J, Dobrovic, A, Dudding, T, Edkins, T, Edwards, S, Eisenbruch, M, Farshid, G, Fellows, A, Fenton, G, Field, M, Flanagan, J, Fong, P, Forrest, L, Fox, S, French, J, Friedlander, M, Gaff, C, Ortega, DG, Gattas, M, George, P, Giles, G, Gill, G, Greening, S, Haan, E, Harris, M, Hart, S, Hayward, N, Heiniger, L, Hopper, J, Hunt, C, James, P, Jenkins, M, Kefford, R, Kidd, A, Kirk, J, Koehler, J, Kollias, J, Lakhani, S
© 2019, The Author(s). Next generation sequencing has revolutionised genomic studies of cancer, having facilitated the development of precision oncology treatments based on a tumour’s molecular profile. We aimed to develop a targeted gene sequenci
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______363::42d52162a3322354f4b953043510c0b5
https://hdl.handle.net/10453/137447
https://hdl.handle.net/10453/137447
© The Author(s) 2018. Motivation: Advanced high-Throughput sequencing technologies have produced massive amount of reads data, and algorithms have been specially designed to contract the size of these datasets for efficient storage and transmission.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______363::267dec9556419a3bc637cd4dba244df7
https://hdl.handle.net/10453/135522
https://hdl.handle.net/10453/135522
Autor:
Mercer, TR, Clark, MB, Crawford, J, Brunck, ME, Gerhardt, DJ, Taft, RJ, Nielsen, LK, Dinger, ME, Mattick, JS
Publikováno v:
Nature Protocols. 9:989-1009
RNA sequencing (RNAseq) samples the majority of expressed genes infrequently, owing to the large size, complex splicing and wide dynamic range of eukaryotic transcriptomes. This results in sparse sequencing coverage that can hinder robust isoform ass
Autor:
Petrov, AI, Kay, SJE, Kalvari, I, Howe, KL, Gray, KA, Bruford, EA, Kersey, PJ, Cochrane, G, Finn, RD, Bateman, A, Kozomara, A, Griffiths-Jones, S, Frankish, A, Zwieb, CW, Lau, BY, Williams, KP, Chan, PP, Lowe, TM, Cannone, JJ, Gutell, RR, Machnicka, MA, Bujnicki, JM, Yoshihama, M, Kenmochi, N, Chai, B, Cole, JR, Szymanski, M, Karlowski, WM, Wood, V, Huala, E, Berardini, TZ, Zhao, Y, Chen, R, Zhu, W, Paraskevopoulou, MD, Vlachos, IS, Hatzigeorgiou, AG, Ma, L, Zhang, Z, Puetz, J, Stadler, PF, McDonald, D, Basu, S, Fey, P, Engel, SR, Cherry, JM, Volders, PJ, Mestdagh, P, Wower, J, Clark, M, Quek, XC, Dinger, ME
Publikováno v:
Europe PubMed Central
Nucleic Acids Research
Petrov, A I, Kay, S J E, Kalvari, I, Howe, K L, Gray, K A, Bruford, E A, Kersey, P J, Cochrane, G, Finn, R D, Bateman, A, Kozomara, A, Griffiths-Jones, S, Frankish, A, Zwieb, C W, Lau, B Y, Williams, K P, Chan, P P, Lowe, T M, Cannone, J J, Gutell, R R, Machnicka, M A, Bujnicki, J M, Yoshihama, M, Kenmochi, N, Chai, B, Cole, J R, Szymanski, M, Karlowski, W M, Wood, V, Huala, E, Berardini, T Z, Zhao, Y, Chen, R, Zhu, W, Paraskevopoulou, M D, Vlachos, I S, Hatzigeorgiou, A G, Ma, L, Zhang, Z, Puetz, J, Stadler, P F, McDonald, D, Basu, S, Fey, P, Engel, S R, Cherry, J M, Volders, P J, Mestdagh, P, Wower, J, Clark, M & The RNAcentral Consortium 2017, ' RNAcentral : A comprehensive database of non-coding RNA sequences ', Nucleic acids research, vol. 45, no. D1, pp. D128-D134 . https://doi.org/10.1093/nar/gkw1008
NUCLEIC ACIDS RESEARCH
Nucleic Acids Research
Petrov, A I, Kay, S J E, Kalvari, I, Howe, K L, Gray, K A, Bruford, E A, Kersey, P J, Cochrane, G, Finn, R D, Bateman, A, Kozomara, A, Griffiths-Jones, S, Frankish, A, Zwieb, C W, Lau, B Y, Williams, K P, Chan, P P, Lowe, T M, Cannone, J J, Gutell, R R, Machnicka, M A, Bujnicki, J M, Yoshihama, M, Kenmochi, N, Chai, B, Cole, J R, Szymanski, M, Karlowski, W M, Wood, V, Huala, E, Berardini, T Z, Zhao, Y, Chen, R, Zhu, W, Paraskevopoulou, M D, Vlachos, I S, Hatzigeorgiou, A G, Ma, L, Zhang, Z, Puetz, J, Stadler, P F, McDonald, D, Basu, S, Fey, P, Engel, S R, Cherry, J M, Volders, P J, Mestdagh, P, Wower, J, Clark, M & The RNAcentral Consortium 2017, ' RNAcentral : A comprehensive database of non-coding RNA sequences ', Nucleic acids research, vol. 45, no. D1, pp. D128-D134 . https://doi.org/10.1093/nar/gkw1008
NUCLEIC ACIDS RESEARCH
RNAcentral is a database of non-coding RNA (ncRNA) sequences that aggregates data from specialised ncRNA resources and provides a single entry point for accessing ncRNA sequences of all ncRNA types from all organisms. Since its launch in 2014, RNAcen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9f197368110d68e495c305190cb9fa87
https://www.repository.cam.ac.uk/handle/1810/265794
https://www.repository.cam.ac.uk/handle/1810/265794
Akademický článek
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Akademický článek
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Autor:
Peña Martinez CD; Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW, 2010, Australia.; St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Kensington, Sydney, NSW, 2010, Australia., Zeraati M; Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW, 2010, Australia.; St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Kensington, Sydney, NSW, 2010, Australia.; School of Biotechnology and Biomolecular Sciences, University of New South Wales, Kensington, Sydney, NSW, 2010, Australia., Rouet R; Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW, 2010, Australia.; St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Kensington, Sydney, NSW, 2010, Australia., Mazigi O; Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW, 2010, Australia.; St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Kensington, Sydney, NSW, 2010, Australia., Henry JY; Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW, 2010, Australia.; St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Kensington, Sydney, NSW, 2010, Australia., Gloss B; Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW, 2010, Australia.; St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Kensington, Sydney, NSW, 2010, Australia., Kretzmann JA; School of Molecular Sciences, University of Western Australia, Crawley, WA, 6009, Australia., Evans CW; School of Molecular Sciences, University of Western Australia, Crawley, WA, 6009, Australia., Ruggiero E; Department of Molecular Medicine, University of Padua, 35121, Padua, Italy., Zanin I; Department of Molecular Medicine, University of Padua, 35121, Padua, Italy., Marušič M; Slovenian NMR Centre, National Institute of Chemistry, SI-1000, Ljubljana, Slovenia., Plavec J; Slovenian NMR Centre, National Institute of Chemistry, SI-1000, Ljubljana, Slovenia., Richter SN; Department of Molecular Medicine, University of Padua, 35121, Padua, Italy., Bryan TM; Children's Medical Research Institute, Faculty of Medicine and Health, University of Sydney, Sydney, NSW, 2145, Australia., Smith NM; School of Molecular Sciences, University of Western Australia, Crawley, WA, 6009, Australia., Dinger ME; Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW, 2010, Australia.; St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Kensington, Sydney, NSW, 2010, Australia.; Faculty of Science, University of Sydney, Camperdown, NSW, 2006, Australia., Kummerfeld S; Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW, 2010, Australia.; St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Kensington, Sydney, NSW, 2010, Australia., Christ D; Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW, 2010, Australia. d.christ@garvan.org.au.; St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Kensington, Sydney, NSW, 2010, Australia. d.christ@garvan.org.au.
Publikováno v:
The EMBO journal [EMBO J] 2024 Oct; Vol. 43 (20), pp. 4786-4804. Date of Electronic Publication: 2024 Aug 29.
Autor:
Zeraati M; School of Life and Environmental Sciences, Faculty of Science, The University of Sydney, Sydney, NSW 2006, Australia. Electronic address: mahdi.zeraati@sydney.edu.au., Ross SE; School of Life and Environmental Sciences, Faculty of Science, The University of Sydney, Sydney, NSW 2006, Australia., Aghaei B; School of Biotechnology and Biomolecular Sciences, Faculty of Science, The University of New South Wales Sydney, Sydney, NSW 2052, Australia., Rajal AG; School of Biotechnology and Biomolecular Sciences, Faculty of Science, The University of New South Wales Sydney, Sydney, NSW 2052, Australia., King C; School of Biotechnology and Biomolecular Sciences, Faculty of Science, The University of New South Wales Sydney, Sydney, NSW 2052, Australia., Dinger ME; School of Life and Environmental Sciences, Faculty of Science, The University of Sydney, Sydney, NSW 2006, Australia. Electronic address: marcel.dinger@sydney.edu.au.
Publikováno v:
STAR protocols [STAR Protoc] 2023 Dec 15; Vol. 4 (4), pp. 102729. Date of Electronic Publication: 2023 Nov 22.
Autor:
Groza T; Rare Care Centre, Perth Children's Hospital, Nedlands, WA 6009, Australia.; Genetics and Rare Diseases Program, Telethon Kids Institute, Nedlands, WA 6009, Australia., Wu H; Institute of Health Informatics, University College London, London WC1E 6BT, United Kingdom., Dinger ME; Pryzm Health, Sydney, NSW 2089, Australia.; School of Life and Environmental Sciences, Faculty of Science, University of Sydney, NSW 2006, Australia., Danis D; The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, United States., Hilton C; Shriners Children's Corporate Headquarters, Tampa, FL 33607, United States., Bagley A; Shriners Children's Northern California, Sacramento, CA 95817, United States., Davids JR; Shriners Children's Northern California, Sacramento, CA 95817, United States., Luo L; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, United States., Lu Z; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, United States., Robinson PN; The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, United States.; Institute for Systems Genomics, University of Connecticut, Farmington, CT 06032, United States.
Publikováno v:
Bioinformatics (Oxford, England) [Bioinformatics] 2023 Dec 01; Vol. 39 (12).
Autor:
Ross SE; Garvan Institute of Medical Research, Sydney, Australia.; School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, Australia.; School of Life and Environmental Sciences, University of Sydney, Sydney, Australia., Vázquez-Marín J; Centro Andaluz de Biología del Desarrollo, CSIC-Universidad Pablo de Olavide-Junta de Andalucía, Seville, Spain., Gert KRB; Research Institute of Molecular Pathology (IMP), Vienna BioCenter (VBC), Campus-Vienna-Biocenter 1, Vienna, Austria.; Vienna BioCenter PhD Program, Doctoral School of the University of Vienna and Medical University of Vienna, A-1030, Vienna, Austria., González-Rajal Á; Garvan Institute of Medical Research, Sydney, Australia.; School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, Australia., Dinger ME; School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, Australia.; School of Life and Environmental Sciences, University of Sydney, Sydney, Australia., Pauli A; Research Institute of Molecular Pathology (IMP), Vienna BioCenter (VBC), Campus-Vienna-Biocenter 1, Vienna, Austria., Martínez-Morales JR; Centro Andaluz de Biología del Desarrollo, CSIC-Universidad Pablo de Olavide-Junta de Andalucía, Seville, Spain., Bogdanovic O; Garvan Institute of Medical Research, Sydney, Australia.; School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, Australia.; Centro Andaluz de Biología del Desarrollo, CSIC-Universidad Pablo de Olavide-Junta de Andalucía, Seville, Spain.
Publikováno v:
Nucleic acids research [Nucleic Acids Res] 2023 Oct 13; Vol. 51 (18), pp. 9658-9671.