Additional file 1 of CAPICE: a computational method for Consequence-Agnostic Pathogenicity Interpretation of Clinical Exome variations

Autor: Li, Shuang, K. Joeri Van Der Velde, Ridder, Dick De, Dijk, Aalt D. J. Van, Soudis, Dimitrios, Zwerwer, Leslie R., Deelen, Patrick, Hendriksen, Dennis, Charbon, Bart, Gijn, Marielle E. Van, Abbott, Kristin, Sikkema-Raddatz, Birgit, Diemen, Cleo C. Van, Kerstjens-Frederikse, Wilhelmina S., Sinke, Richard J., Swertz, Morris A.

Additional file 1.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::21c22e4d61d2159d52f154bf71080ff3

Geometricus represents protein structures as shape-mers derived from moment invariants.

Autor: Durairaj, Janani, Akdel, Mehmet, Ridder, Dick de, Dijk, Aalt D J van

Publikováno v: Bioinformatics; 2020 Supplement, Vol. 36, pi718-i725, 8p

Novel routes towards bioplastics from plants: elucidation of the methylperillate biosynthesis pathway from Salvia dorisiana trichomes.

Autor: Jongedijk, Esmer, Müller, Sebastian, Dijk, Aalt D J van, Schijlen, Elio, Champagne, Antoine, Boutry, Marc, Levisson, Mark, van der Krol, Sander, Bouwmeester, Harro, Beekwilder, Jules

Publikováno v: Journal of Experimental Botany; 5/30/2020, Vol. 71 Issue 10, p3052-3065, 14p

Additional file 1 of An expanded evaluation of protein function prediction methods shows an improvement in accuracy

Autor: Yuxiang Jiang, Oron, Tal Ronnen, Clark, Wyatt T., Bankapur, Asma R., D’Andrea, Daniel, Lepore, Rosalba, Funk, Christopher S., Indika Kahanda, Verspoor, Karin M., Ben-Hur, Asa, Koo, Da Chen Emily, Penfold-Brown, Duncan, Shasha, Dennis, Youngs, Noah, Bonneau, Richard, Lin, Alexandra, Sahraeian, Sayed M. E., Martelli, Pier Luigi, Profiti, Giuseppe, Casadio, Rita, Renzhi Cao, Zhaolong Zhong, Jianlin Cheng, Altenhoff, Adrian, Skunca, Nives, Dessimoz, Christophe, Tunca Dogan, Hakala, Kai, Suwisa Kaewphan, Mehryary, Farrokh, Salakoski, Tapio, Ginter, Filip, Fang, Hai, Smithers, Ben, Oates, Matt, Gough, Julian, Törönen, Petri, Koskinen, Patrik, Holm, Liisa, Ching-Tai Chen, Hsu, Wen-Lian, Bryson, Kevin, Cozzetto, Domenico, Minneci, Federico, Jones, David T., Chapman, Samuel, Dukka BKC, Ishita K. Khan, Kihara, Daisuke, Ofer, Dan, Rappoport, Nadav, Stern, Amos, Cibrian-Uhalte, Elena, Denny, Paul, Foulger, Rebecca E., Hieta, Reija, Legge, Duncan, Lovering, Ruth C., Magrane, Michele, Melidoni, Anna N., Mutowo-Meullenet, Prudence, Pichler, Klemens, Shypitsyna, Aleksandra, Li, Biao, Pooya Zakeri, ElShal, Sarah, Léon-Charles Tranchevent, Sayoni Das, Dawson, Natalie L., Lee, David, Lees, Jonathan G., Sillitoe, Ian, Prajwal Bhat, Nepusz, Tamás, Romero, Alfonso E., Sasidharan, Rajkumar, Haixuan Yang, Paccanaro, Alberto, Gillis, Jesse, Sedeño-Cortés, Adriana E., Pavlidis, Paul, Feng, Shou, Cejuela, Juan M., Goldberg, Tatyana, Hamp, Tobias, Richter, Lothar, Salamov, Asaf, Gabaldon, Toni, Marcet-Houben, Marina, Supek, Fran, Qingtian Gong, Ning, Wei, Yuanpeng Zhou, Weidong Tian, Falda, Marco, Fontana, Paolo, Lavezzo, Enrico, Toppo, Stefano, Ferrari, Carlo, Giollo, Manuel, Piovesan, Damiano, Tosatto, Silvio C.E., Pozo, Angela Del, Fernández, José M., Maietta, Paolo, Valencia, Alfonso, Tress, Michael L., Benso, Alfredo, Carlo, Stefano Di, Politano, Gianfranco, Savino, Alessandro, Hafeez Ur Rehman, Re, Matteo, Mesiti, Marco, Valentini, Giorgio, Bargsten, Joachim W., Dijk, Aalt D. J. Van, Gemovic, Branislava, Glisic, Sanja, Vladmir Perovic, Veljkovic, Veljko, Veljkovic, Nevena, Danillo C. Almeida-E-Silva, Vencio, Ricardo Z. N., Malvika Sharan, Vogel, Jörg, Lakesh Kansakar, Shanshan Zhang, Vucetic, Slobodan, Wang, Zheng, Sternberg, Michael J. E., Wass, Mark N., Huntley, Rachael P., Martin, Maria J., O’Donovan, Claire, Robinson, Peter N., Moreau, Yves, Tramontano, Anna, Babbitt, Patricia C., Brenner, Steven E., Linial, Michal, Orengo, Christine A., Rost, Burkhard, Greene, Casey S., Mooney, Sean D., Friedberg, Iddo, Radivojac, Predrag

A document containing a subset of CAFA2 analyses that are equivalent to those provided about the CAFA1 experiment in the CAFA1 supplement. (PDF 11100 kb)

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::440982b428057b442323a85dc6976879