Zobrazeno 1 - 8
of 8
pro vyhledávání: '"Diana I. Cruz Dávalos"'
Autor:
Diana I. Cruz-Dávalos, María A. Nieves-Colón, Alexandra Sockell, G. David Poznik, Hannes Schroeder, Anne C. Stone, Carlos D. Bustamante, Anna-Sapfo Malaspinas, María C. Ávila-Arcos
Publikováno v:
BMC Genomics, Vol 19, Iss 1, Pp 1-16 (2018)
Abstract Background As most ancient biological samples have low levels of endogenous DNA, it is advantageous to enrich for specific genomic regions prior to sequencing. One approach—in-solution capture-enrichment—retrieves sequences of interest a
Externí odkaz:
https://doaj.org/article/816d1d78e11d419083ab8853a8bf6c49
Autor:
Samuel Neuenschwander, Diana I Cruz Dávalos, Lucas Anchieri, Bárbara Sousa da Mota, Davide Bozzi, Simone Rubinacci, Olivier Delaneau, Simon Rasmussen, Anna-Sapfo Malaspinas
Publikováno v:
Neuenschwander, S, Cruz Dávalos, D I, Anchieri, L, Sousa da Mota, B, Bozzi, D, Rubinacci, S, Delaneau, O, Rasmussen, S & Malaspinas, A-S 2023, ' Mapache : a flexible pipeline to map ancient DNA ', Bioinformatics (Online), vol. 39, no. 2 . https://doi.org/10.1093/bioinformatics/btad028
Summary: Mapping ancient DNA to a reference genome is challenging as it involves numerous steps, is time-consuming and has to be repeated within a study to assess the quality of extracts and libraries; as a result, the mapping needs to be automatized
Autor:
Lucas Anchieri, Vitor C. Sousa, Metaxia Tsipopoulou, Bárbara Sousa da Mota, Eleni Kalliga, Adamantios Sampson, J. Víctor Moreno-Mayar, Samuel Neuenschwander, Kostas Kotsakis, Dimitra Theodorou, Angelos Souleles, Diamantis Panagiotopoulos, Elissavet Ganiatsou, Francisco Coroado-Santos, Ioannis Akamatis, Sevasti Triantaphyllou, Olga Philaniotou, Christina Ziota, Carlos Eduardo G. Amorim, Christina Papageorgopoulou, Paul Halstead, Yami Ommar Arizmendi Cárdenas, Jeffrey D. Jensen, Florian Clemente, Dushka Urem-Kotsou, Olga Dolgova, Diana I. Cruz Dávalos, Martina Unterländer, Jens Blöcher, Olivier Delaneau, Joachim Burger, Ioannis Kontopoulos, Laura Winkelbach, Frédéric Michaud, Anna-Sapfo Malaspinas, Georgia Karamitrou-Mentessidi, Oscar Lao
Publikováno v:
Clemente, F, Unterlaender, M, Dolgova, O, Amorim, C E G, Coroado-Santos, F, Neuenschwander, S, Ganiatsou, E, Davalos, D I C, Anchieri, L, Michaud, F, Winkelbach, L, Bloecher, J, Cardenas, Y O A, da Mota, B S, Kalliga, E, Souleles, A, Kontopoulos, I, Karamitrou-Mentessidi, G, Philaniotou, O, Sampson, A, Theodorou, D, Tsipopoulou, M, Akamatis, I, Halstead, P, Kotsakis, K, Urem-Kotsou, D, Panagiotopoulos, D, Ziota, C, Triantaphyllou, S, Delaneau, O, Jensen, J D, Victor Moreno-Mayar, J, Burger, J, Sousa, V C, Lao, O, Malaspinas, A-S & Papageorgopoulou, C 2021, ' The genomic history of the Aegean palatial civilizations ', Cell, vol. 184, no. 10, 21, pp. 2565-2586 . https://doi.org/10.1016/j.cell.2021.03.039
Cell
Cell, vol. 184, no. 10, pp. 2565-2586.e21
Repositório Científico de Acesso Aberto de Portugal
Repositório Científico de Acesso Aberto de Portugal (RCAAP)
instacron:RCAAP
Cell
Cell, vol. 184, no. 10, pp. 2565-2586.e21
Repositório Científico de Acesso Aberto de Portugal
Repositório Científico de Acesso Aberto de Portugal (RCAAP)
instacron:RCAAP
Summary The Cycladic, the Minoan, and the Helladic (Mycenaean) cultures define the Bronze Age (BA) of Greece. Urbanism, complex social structures, craft and agricultural specialization, and the earliest forms of writing characterize this iconic perio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0017f60511f3bafe6f4ed89d262f0904
http://hdl.handle.net/10230/47677
http://hdl.handle.net/10230/47677
Autor:
Alexandre Gouy, Diana I. Cruz Dávalos
Publikováno v:
The Art of Theoretical Biology ISBN: 9783030334703
This image represents three replicates of a simulation of the evolution of a population of bacteria over time. Each square corresponds to an individual and each color corresponds to a new mutant.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ac311ff55f1de78576bba4d3e3b761bf
https://doi.org/10.1007/978-3-030-33471-0_28
https://doi.org/10.1007/978-3-030-33471-0_28
Autor:
Alejandro Toro Blanco, Paloma Contreras, Eske Willerslev, Jacqueline Galimany, Andrés Moreno-Estrada, Manuel San Román, Meredith L. Carpenter, Scott Huntsman, Anna-Sapfo Malaspinas, Esteban G. Burchard, Julian R. Homburger, Paula F. Campos, Constanza de la Fuente, María C. Ávila-Arcos, Diana I. Cruz Dávalos, Ricardo A. Verdugo, Omar Reyes, Celeste Eng, Mauricio Moraga, Carlos Bustamante, Elena Llop
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America, vol. 115, no. 17, pp. E4006-E4012
Proceedings of the National Academy of Sciences
Repositório Científico de Acesso Aberto de Portugal
Repositório Científico de Acesso Aberto de Portugal (RCAAP)
instacron:RCAAP
Proceedings of the National Academy of Sciences
Repositório Científico de Acesso Aberto de Portugal
Repositório Científico de Acesso Aberto de Portugal (RCAAP)
instacron:RCAAP
Patagonia was the last region of the Americas reached by humans who entered the continent from Siberia ∼15,000–20,000 y ago. Despite recent genomic approaches to reconstruct the continental evolutionary history, regional characterization of ancie
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6730b8d3a1b3d6bcd1e38816f775213e
https://hdl.handle.net/10216/120315
https://hdl.handle.net/10216/120315
Autor:
Hannes Schroeder, Carlos Bustamante, Alexandra Sockell, Maria A. Nieves-Colón, Anna-Sapfo Malaspinas, María C. Ávila-Arcos, Anne C. Stone, Diana I. Cruz Dávalos, G. David Poznik
Publikováno v:
Cruz-Davalos, D I, Nieves-Colon, M A, Sockell, A, Poznik, G D, Schroeder, H, Stone, A C, Bustamante, C D, Malaspinas, A-S & Ávila-Arcos, M C 2018, ' In-solution Y-chromosome capture-enrichment on ancient DNA libraries ', BMC Genomics, vol. 19 . https://doi.org/10.1186/s12864-018-4945-x
BMC Genomics
BMC Genomics, Vol 19, Iss 1, Pp 1-16 (2018)
BMC Genomics
BMC Genomics, Vol 19, Iss 1, Pp 1-16 (2018)
Background As most ancient biological samples have low levels of endogenous DNA, it is advantageous to enrich for specific genomic regions prior to sequencing. One approach—in-solution capture-enrichment—retrieves sequences of interest and reduce
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2c73612970e883d4ac6510b74c02bfde
Autor:
Diana I, Cruz-Dávalos, María A, Nieves-Colón, Alexandra, Sockell, G David, Poznik, Hannes, Schroeder, Anne C, Stone, Carlos D, Bustamante, Anna-Sapfo, Malaspinas, María C, Ávila-Arcos
Publikováno v:
BMC Genomics
BMC genomics, vol. 19, no. 1, pp. 608
BMC genomics, vol. 19, no. 1, pp. 608
Background As most ancient biological samples have low levels of endogenous DNA, it is advantageous to enrich for specific genomic regions prior to sequencing. One approach—in-solution capture-enrichment—retrieves sequences of interest and reduce
Autor:
Andaine Seguin-Orlando, Ahmed H. Alfarhan, Bastien Llamas, Khaled A. S. Al-Rasheid, Julien Soubrier, Diana I. Cruz-Dávalos, Eske Willerslev, Mélanie Pruvost, Charleen Gaunitz, Antoine Fages, Pablo Librado, Norbert Beneke, Cristina Gamba, Alan Cooper, Ludovic Orlando, Arne Ludwig, Saleh A. Alquraishi, Amelie Scheu
Publikováno v:
Molecular ecology resources. 17(3)
High-throughput sequencing has dramatically fostered ancient DNA research in recent years. Shotgun sequencing, however, does not necessarily appear as the best-suited approach due to the extensive contamination of samples with exogenous environmental