Zobrazeno 1 - 10
of 98
pro vyhledávání: '"Devin Coleman"'
Autor:
Daniel F. Caddell, Dean Pettinga, Katherine Louie, Benjamin P. Bowen, Julie A. Sievert, Joy Hollingsworth, Rebeckah Rubanowitz, Jeffery Dahlberg, Elizabeth Purdom, Trent Northen, Devin Coleman-Derr
Publikováno v:
Phytobiomes Journal, Vol 7, Iss 4, Pp 449-463 (2023)
Plant-associated microbial communities shift in composition as a result of environmental perturbations, such as drought. It has been shown that Actinobacteria are enriched in plant roots and rhizospheres during drought stress. However, the correlatio
Externí odkaz:
https://doaj.org/article/a5d53d77dc53466aac49cd2ff4b798f1
Autor:
Cheng Gao, Ling Xu, Liliam Montoya, Mary Madera, Joy Hollingsworth, Liang Chen, Elizabeth Purdom, Vasanth Singan, John Vogel, Robert B. Hutmacher, Jeffery A. Dahlberg, Devin Coleman-Derr, Peggy G. Lemaux, John W. Taylor
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-12 (2022)
Fungi are expected to be more resistant and less resilient than bacteria to environmental disturbances. Here, the authors report complex responses by microbial co-occurrence networks to drought in an agricultural system, challenging simple prediction
Externí odkaz:
https://doaj.org/article/c52e3caf792a44a693cf22ddeabb133a
Autor:
Daniel Caddell, Noah J. Langenfeld, Madigan JH. Eckels, Shuyang Zhen, Rachel Klaras, Laxmi Mishra, Bruce Bugbee, Devin Coleman-Derr
Publikováno v:
Frontiers in Plant Science, Vol 14 (2023)
Plants compete for light partly by over-producing chlorophyll in leaves. The resulting high light absorption is an effective strategy for out competing neighbors in mixed communities, but it prevents light transmission to lower leaves and limits phot
Externí odkaz:
https://doaj.org/article/804d025c29234353978444c8ced3a056
Autor:
Benjamin Cole, Dominique Bergmann, Crysten E. Blaby-Haas, Ian K. Blaby, Kristofer E. Bouchard, Siobhan M. Brady, Doina Ciobanu, Devin Coleman-Derr, Samuel Leiboff, Jenny C. Mortimer, Tatsuya Nobori, Seung Y. Rhee, Jeremy Schmutz, Blake A. Simmons, Anup K. Singh, Neelima Sinha, John P. Vogel, Ronan C. O’Malley, Axel Visel, Diane E. Dickel
Publikováno v:
Communications Biology, Vol 4, Iss 1, Pp 1-12 (2021)
In this Perspective, Diane Dickel and colleagues review recent progress and opportunities in applying single-cell sequencing and microfluidics methods to plants. The authors highlight the need for new tools developed with plants in mind, and advocate
Externí odkaz:
https://doaj.org/article/a556a9b4eca049a9b923bb2bad139804
Autor:
Ling Xu, Zhaobin Dong, Dawn Chiniquy, Grady Pierroz, Siwen Deng, Cheng Gao, Spencer Diamond, Tuesday Simmons, Heidi M.-L. Wipf, Daniel Caddell, Nelle Varoquaux, Mary A. Madera, Robert Hutmacher, Adam Deutschbauer, Jeffery A. Dahlberg, Mary Lou Guerinot, Elizabeth Purdom, Jillian F. Banfield, John W. Taylor, Peggy G. Lemaux, Devin Coleman-Derr
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-17 (2021)
Advances in omics provide a tool to understand mechanisms for plant–microbial interactions under stress. Here the authors apply genome-resolved metagenomics to investigate sorghum and its microbiome responses to drought, identifying an unexpected r
Externí odkaz:
https://doaj.org/article/bd88fbdb6fdd4dce9b4f6af4bf2e94b2
Autor:
Ling Xu, Grady Pierroz, Heidi M.-L. Wipf, Cheng Gao, John W. Taylor, Peggy G. Lemaux, Devin Coleman-Derr
Publikováno v:
Microbiome, Vol 9, Iss 1, Pp 1-11 (2021)
Abstract Host-microbiome interactions are recognized for their importance to host health. An improved understanding of the molecular underpinnings of host-microbiome relationships will advance our capacity to accurately predict host fitness and manip
Externí odkaz:
https://doaj.org/article/38295adc50ed46fdb2d165b4b37b366c
Publikováno v:
Phytobiomes Journal, Vol 5, Iss 2, Pp 166-176 (2021)
Water deficit and extreme temperatures regularly and considerably reduce crop productivity. Although several studies have explored the role of the plant microbiome in drought tolerance, it remains to be determined how the often co-occurring factor of
Externí odkaz:
https://doaj.org/article/fbd3583b8d8446228642573c78532a32
Autor:
Cheng Gao, Liliam Montoya, Ling Xu, Mary Madera, Joy Hollingsworth, Elizabeth Purdom, Vasanth Singan, John Vogel, Robert B. Hutmacher, Jeffery A. Dahlberg, Devin Coleman-Derr, Peggy G. Lemaux, John W. Taylor
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-14 (2020)
Fungal community assembly on crop plants is thought to be driven by deterministic selection exerted by the host. Here Gao et al. use a sorghum system to show that stochastic forces act on fungal community assembly in leaves and roots early in host de
Externí odkaz:
https://doaj.org/article/fcad27f2a9b74382b97e2f31ece0fb44
Autor:
Tess Scavuzzo-Duggan, Nelle Varoquaux, Mary Madera, John P. Vogel, Jeffery Dahlberg, Robert Hutmacher, Michael Belcher, Jasmine Ortega, Devin Coleman-Derr, Peggy Lemaux, Elizabeth Purdom, Henrik V. Scheller
Publikováno v:
Frontiers in Plant Science, Vol 12 (2021)
Renewable fuels are needed to replace fossil fuels in the immediate future. Lignocellulosic bioenergy crops provide a renewable alternative that sequesters atmospheric carbon. To prevent displacement of food crops, it would be advantageous to grow bi
Externí odkaz:
https://doaj.org/article/2623e7ecf0f441469d8fb30cc0cc4a99
Autor:
Aaron J. Berliner, Jacob M. Hilzinger, Anthony J. Abel, Matthew J. McNulty, George Makrygiorgos, Nils J. H. Averesch, Soumyajit Sen Gupta, Alexander Benvenuti, Daniel F. Caddell, Stefano Cestellos-Blanco, Anna Doloman, Skyler Friedline, Davian Ho, Wenyu Gu, Avery Hill, Paul Kusuma, Isaac Lipsky, Mia Mirkovic, Jorge Luis Meraz, Vincent Pane, Kyle B. Sander, Fengzhe Shi, Jeffrey M. Skerker, Alexander Styer, Kyle Valgardson, Kelly Wetmore, Sung-Geun Woo, Yongao Xiong, Kevin Yates, Cindy Zhang, Shuyang Zhen, Bruce Bugbee, Douglas S. Clark, Devin Coleman-Derr, Ali Mesbah, Somen Nandi, Robert M. Waymouth, Peidong Yang, Craig S. Criddle, Karen A. McDonald, Lance C. Seefeldt, Amor A. Menezes, Adam P. Arkin
Publikováno v:
Frontiers in Astronomy and Space Sciences, Vol 8 (2021)
A crewed mission to and from Mars may include an exciting array of enabling biotechnologies that leverage inherent mass, power, and volume advantages over traditional abiotic approaches. In this perspective, we articulate the scientific and engineeri
Externí odkaz:
https://doaj.org/article/54fae5e7545c41d48e719b97a8de308b