Cicada Endosymbionts Have tRNAs That Are Correctly Processed Despite Having Genomes That Do Not Encode All of the tRNA Processing Machinery

Autor: James T. Van Leuven, Meng Mao, Denghui D. Xing, Gordon M. Bennett, John P. McCutcheon

Publikováno v: mBio, Vol 10, Iss 3 (2019)

ABSTRACT Gene loss and genome reduction are defining characteristics of endosymbiotic bacteria. The most highly reduced endosymbiont genomes have lost numerous essential genes related to core cellular processes such as replication, transcription, and

Externí odkaz: https://doaj.org/article/cfd241f92a9d49cc96593cb9f46ad0d4

Mitochondrial fatty acid β-oxidation is required for storage-lipid catabolism in a marine diatom.

Autor: Jallet D; Department of Biology, Colorado State University, 1878 Campus Delivery, 200 West Lake Street, Fort Collins, CO, 80523, USA.; Toulouse Biotechnology Institute, CNRS, INRAE, INSA, Université de Toulouse, Toulouse, 31077, France., Xing D; Department of Biology, Colorado State University, 1878 Campus Delivery, 200 West Lake Street, Fort Collins, CO, 80523, USA., Hughes A; Department of Biology, Colorado State University, 1878 Campus Delivery, 200 West Lake Street, Fort Collins, CO, 80523, USA., Moosburner M; Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, 92093, USA.; J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA, 92037, USA., Simmons MP; Department of Biology, Colorado State University, 1878 Campus Delivery, 200 West Lake Street, Fort Collins, CO, 80523, USA., Allen AE; Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, 92093, USA.; J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA, 92037, USA., Peers G; Department of Biology, Colorado State University, 1878 Campus Delivery, 200 West Lake Street, Fort Collins, CO, 80523, USA.

Publikováno v: The New phytologist [New Phytol] 2020 Nov; Vol. 228 (3), pp. 946-958. Date of Electronic Publication: 2020 Jul 21.

Global gene expression analysis using RNA-seq uncovered a new role for SR1/CAMTA3 transcription factor in salt stress.

Autor: Prasad KVSK; Department of Biology and Program in Molecular Plant Biology, Colorado State University, Fort Collins, CO, 80523, USA., Abdel-Hameed AAE; Department of Biology and Program in Molecular Plant Biology, Colorado State University, Fort Collins, CO, 80523, USA., Xing D; Department of Biology and Program in Molecular Plant Biology, Colorado State University, Fort Collins, CO, 80523, USA., Reddy ASN; Department of Biology and Program in Molecular Plant Biology, Colorado State University, Fort Collins, CO, 80523, USA.

Publikováno v: Scientific reports [Sci Rep] 2016 Jun 02; Vol. 6, pp. 27021. Date of Electronic Publication: 2016 Jun 02.

RADPRE: a computational program for identification of differential mRNA processing including alternative polyadenylation.

Autor: Xing D; Department of Biology, Miami University, Oxford, OH, 45056, USA, Denghui.xing@colostate.edu., Li QQ

Publikováno v: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2015; Vol. 1255, pp. 57-66.

Plant polyadenylation factors: conservation and variety in the polyadenylation complex in plants.

Autor: Hunt AG; Department of Plant and Soil Sciences, University of Kentucky, Lexington, KY 40546, USA., Xing D, Li QQ

Publikováno v: BMC genomics [BMC Genomics] 2012 Nov 20; Vol. 13, pp. 641. Date of Electronic Publication: 2012 Nov 20.