Zobrazeno 1 - 10
of 22
pro vyhledávání: '"Deltel, Charles"'
Publikováno v:
In Ocean Modelling 2011 36(1):1-25
Akademický článek
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Publikováno v:
[Research Report] RR-8923, INRIA. 2016, pp.17
This paper presents the implementation of a mapping algorithm on the UPMEM architecture. The mapping is a basic bioinformatics application that consists in finding the best location of millions of short DNA sequences on a full genome. The mapping can
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::e1e517167be67b2551a8f33c77ac836c
https://hal.archives-ouvertes.fr/hal-01327511/file/RR-MAP_UPMEM_8923_June_2016.pdf
https://hal.archives-ouvertes.fr/hal-01327511/file/RR-MAP_UPMEM_8923_June_2016.pdf
Publikováno v:
[Research Report] RR-8878, INRIA Rennes-Bretagne Atlantique. 2016, pp.20
This paper presents the implementation of the BLAST software on the UPMEM architecture. BLAST is a well-known molecular biology software to rapidly scan DNA or protein genomic banks. It is daily used by thousands of biologists. Given a query sequence
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::a7b0e34687c6b40e5979f4708303491a
https://hal.archives-ouvertes.fr/hal-01294345v2/file/RR-BLAST_UPMEM_27_04_2016.pdf
https://hal.archives-ouvertes.fr/hal-01294345v2/file/RR-BLAST_UPMEM_27_04_2016.pdf
Publikováno v:
9th Brazilian Symposium on Bioinformatics, BSB 2014
9th Brazilian Symposium on Bioinformatics, BSB 2014, Oct 2014, Belo Honrizonte, Brazil
9th Brazilian Symposium on Bioinformatics, BSB 2014, Oct 2014, Belo Honrizonte, Brazil
International audience; The analysis of NGS data remains a time and space-consuming task. Many efforts have been made to provide efficient data structures for indexing the terabytes of data generated by the fast sequencing machines (Suffix Array, Bur
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::3ee268cc4c9b006d5ad96fe58aaa6cc5
https://hal.archives-ouvertes.fr/hal-01088828/document
https://hal.archives-ouvertes.fr/hal-01088828/document
Autor:
Drezen, Erwan, Rizk, Guillaume, Chikhi, Rayan, Deltel, Charles, Lemaitre, Claire, Peterlongo, Pierre, Lavenier, Dominique
Publikováno v:
Sequencing, Finishing and Analysis in the Future Meeting
Sequencing, Finishing and Analysis in the Future Meeting, May 2014, Santa Fé, United States
Sequencing, Finishing and Analysis in the Future Meeting, May 2014, Santa Fé, United States
International audience; The analysis of NGS data remains a time and space-consuming task. Many efforts have been made toprovide efficient data structures for indexing the terabytes of data generated by the fast sequencingmachines (Suffix Array, Burro
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::9fbe0d8e9d81f5e6ad835efdb6982a80
https://hal.science/hal-01088683/document
https://hal.science/hal-01088683/document
Autor:
Drezen, Erwan, Rizk, Guillaume, Chikhi, Rayan, Deltel, Charles, Lemaitre, Claire, Peterlongo, Pierre, Lavenier, Dominique
Publikováno v:
Bio-IT World Conference
Bio-IT World Conference, Apr 2014, Boston, United States
Bio-IT World Conference, Apr 2014, Boston, United States
International audience; The analysis of NGS data remains a time and space-consuming task. Many efforts have been made to provide efficient data structures for indexing the terabytes of data generated by the fast sequencing machines (Suffix Array, Bur
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::c4860b33d1b99f5664c882c0c9bc1db4
https://hal.science/hal-01088641/file/BioIT_poster_v1.1.1.pdf
https://hal.science/hal-01088641/file/BioIT_poster_v1.1.1.pdf
Autor:
Berthelot, Jean-Frédéric, Deltel, Charles, Giraud, Mathieu, Janot, Stéphane, Jourdan, Laetitia, Lavenier, Dominique, Touzet, Helene, Varré, Jean-Stéphane
Publikováno v:
JOBIM 2011
JOBIM 2011, Jul 2011, Paris, France
JOBIM 2011, Jul 2011, Paris, France
http://www.pasteur.fr/ip/easysite/pasteur/fr/recherche/communication-scientifique/conferences-et-congres-scientifiques/conferences-service-colloques-institut-pasteur/jobim-2011
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::17200060840d7f09fd0023e96b2bd41f
https://hal.archives-ouvertes.fr/hal-00637847
https://hal.archives-ouvertes.fr/hal-00637847
Publikováno v:
[Contract] D1.3, INRIA. 2011, pp.44
The development of the tangent linear and adjoint models (TAM in the following) of the dynamical core of the NEMO ocean engine (NEMOTAM) is a key objective of the VODA project. TAM are widely used for variational assimilation applications, but they a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::40b2f59f7e87431e4c17cba019f4b4ec
https://inria.hal.science/hal-00941626/file/D1.3.pdf
https://inria.hal.science/hal-00941626/file/D1.3.pdf