Zobrazeno 1 - 10
of 173
pro vyhledávání: '"Deepa Agashe"'
Autor:
M Sreepadmanabh, Meenakshi Ganesh, Pratibha Sanjenbam, Christina Kurzthaler, Deepa Agashe, Tapomoy Bhattacharjee
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-13 (2024)
Abstract Evidence from homogeneous liquid or flat-plate cultures indicates that biochemical cues are the primary modes of bacterial interaction with their microenvironment. However, these systems fail to capture the effect of physical confinement on
Externí odkaz:
https://doaj.org/article/a50bb4e53ca949fcb6aed31a1601e64a
Autor:
Pratibha Sanjenbam, Deepa Agashe
Publikováno v:
mSphere, Vol 9, Iss 11 (2024)
ABSTRACT Phyllosphere-associated microbes can significantly alter host plant fitness, with distinct functions provided by bacteria inhabiting the epiphytic (external surface) vs endophytic niches (internal leaf tissue). Hence, it is important to unde
Externí odkaz:
https://doaj.org/article/a590e4878dd84c6e954009add50d4b53
Autor:
Meike T. Wortel, Deepa Agashe, Susan F. Bailey, Claudia Bank, Karen Bisschop, Thomas Blankers, Johannes Cairns, Enrico Sandro Colizzi, Davide Cusseddu, Michael M. Desai, Bram vanDijk, Martijn Egas, Jacintha Ellers, Astrid T. Groot, David G. Heckel, Marcelle L. Johnson, Ken Kraaijeveld, Joachim Krug, Liedewij Laan, Michael Lässig, Peter A. Lind, Jeroen Meijer, Luke M. Noble, Samir Okasha, Paul B. Rainey, Daniel E. Rozen, Shraddha Shitut, Sander J. Tans, Olivier Tenaillon, Henrique Teotónio, J. Arjan G. M. deVisser, Marcel E. Visser, Renske M. A. Vroomans, Gijsbert D. A. Werner, Bregje Wertheim, Pleuni S. Pennings
Publikováno v:
Evolutionary Applications, Vol 16, Iss 1, Pp 3-21 (2023)
Abstract Evolution has traditionally been a historical and descriptive science, and predicting future evolutionary processes has long been considered impossible. However, evolutionary predictions are increasingly being developed and used in medicine,
Externí odkaz:
https://doaj.org/article/5d350dba2ce2465ba41df12f9a33a44d
Publikováno v:
eLife, Vol 12 (2023)
The rate and accuracy of translation hinges upon multiple components – including transfer RNA (tRNA) pools, tRNA modifying enzymes, and rRNA molecules – many of which are redundant in terms of gene copy number or function. It has been hypothesize
Externí odkaz:
https://doaj.org/article/8435cd4975c44168a94b81872e2ab864
Publikováno v:
Evolution. 77:550-561
Resource choice behavior has enormous fitness consequences and can drive niche expansion. However, individual behavioral choices are often mediated by context, determined by past experience. Do such context-dependent behaviors reflect maladaptive var
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::55802650818f539f461c2176bf50806e
https://doi.org/10.1093/evolut/qpac035
https://doi.org/10.1093/evolut/qpac035
Publikováno v:
PLoS Genetics, Vol 16, Iss 3, p e1008654 (2020)
Mistranslation is typically deleterious for cells, although specific mistranslated proteins can confer a short-term benefit in a particular environment. However, given its large overall cost, the prevalence of high global mistranslation rates remains
Externí odkaz:
https://doaj.org/article/06118c46c19f4cc7b5dca9e188778c60
Publikováno v:
PLoS ONE, Vol 15, Iss 2, p e0228550 (2020)
The ecology and distribution of many bacteria is strongly associated with specific eukaryotic hosts. However, the impact of such host association on bacterial ecology and evolution is not well understood. Bacteria from the genus Methylobacterium cons
Externí odkaz:
https://doaj.org/article/d58c73ed6d15465c83b11f575ba4bd49
Autor:
Aparna Agarwal, Deepa Agashe
Publikováno v:
PLoS ONE, Vol 15, Iss 10, p e0239051 (2020)
A large body of ongoing research focuses on understanding the mechanisms and processes underlying host-microbiome interactions, and predicting their ecological and evolutionary outcomes. To draw general conclusions about such interactions and underst
Externí odkaz:
https://doaj.org/article/1f00ef32abd74e55ba9f375199b0e6b1
Host dietary specialization and neutral assembly shape gut bacterial communities of wild dragonflies
Publikováno v:
PeerJ, Vol 7, p e8058 (2019)
Host-associated gut microbiota can have significant impacts on host ecology and evolution and are often host-specific. Multiple factors can contribute to such host-specificity: (1) host dietary specialization passively determining microbial colonizat
Externí odkaz:
https://doaj.org/article/4cc250ea1409436dbde16035d5f0bac7
Autor:
Sivan Kaminski Strauss, Dvir Schirman, Ghil Jona, Aaron N Brooks, Aditya M Kunjapur, Alex N Nguyen Ba, Alice Flint, Andras Solt, Andreas Mershin, Atray Dixit, Avihu H Yona, Bálint Csörgő, Bede Phillip Busby, Bianca P Hennig, Csaba Pál, Daniel Schraivogel, Daniel Schultz, David G Wernick, Deepa Agashe, Dikla Levi, Dmitry Zabezhinsky, Dor Russ, Ehud Sass, Einat Tamar, Elad Herz, Emmanuel D Levy, George M Church, Idan Yelin, Iftach Nachman, Jeffrey E Gerst, Joseph M Georgeson, Katarzyna P Adamala, Lars M Steinmetz, Marc Rübsam, Markus Ralser, Michael Klutstein, Michael M Desai, Nilima Walunjkar, Ning Yin, Noa Aharon Hefetz, Noah Jakimo, Olga Snitser, Omri Adini, Prashant Kumar, Rachel Soo Hoo Smith, Razi Zeidan, Ronen Hazan, Roni Rak, Roy Kishony, Shannon Johnson, Shira Nouriel, Sibylle C Vonesch, Simmie Foster, Tal Dagan, Tanita Wein, Thrasyvoulos Karydis, Timothy M Wannier, Timothy Stiles, Viridiana Olin-Sandoval, William F Mueller, Yinon M Bar-On, Orna Dahan, Yitzhak Pilpel
Publikováno v:
PLoS Biology, Vol 17, Iss 3, p e3000182 (2019)
In experimental evolution, scientists evolve organisms in the lab, typically by challenging them to new environmental conditions. How best to evolve a desired trait? Should the challenge be applied abruptly, gradually, periodically, sporadically? Sho
Externí odkaz:
https://doaj.org/article/bb9a50be8dcc4dc98274ddfdc59bba88