Zobrazeno 1 - 8
of 8
pro vyhledávání: '"Debika Choudhury"'
Autor:
Nikhil Nair, Vikas Trivedi, Sean Sullivan, Debika Choudhury, Venkatesh Endalur Gopinarayanan, Taylor Hart
Engineering synthetic heterotrophy (i.e., growth on non-native substrates) is key to the efficient bio-based valorization of renewable and waste substrates. Among these, engineering hemicellulosic pentose utilization has been well-explored inSaccharo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d3a25cbd5fe2fd541fb0a6f0d7a6116b
https://doi.org/10.1101/2022.05.21.492926
https://doi.org/10.1101/2022.05.21.492926
Publikováno v:
The Canadian Journal of Chemical Engineering. 96:1881-1887
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::815cc2e791a4f73f3b57d505b5e3231e
https://doi.org/10.1002/cjce.23197
https://doi.org/10.1002/cjce.23197
Autor:
Supreet Saini, Debika Choudhury
Publikováno v:
Letters in Applied Microbiology. 66:132-137
Bacteria frequently encounter multiple sugars in their natural surroundings. While the dynamics of utilization of glucose-containing sugar mixtures have been well investigated, there are few reports addressing regulation of utilization of glucose-fre
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1717da7e41c8ba7a8598a52f984263c7
https://doi.org/10.1111/lam.12827
https://doi.org/10.1111/lam.12827
Autor:
Supreet Saini, Debika Choudhury
Publikováno v:
Journal of evolutionary biologyREFERENCES. 32(12)
Cellular energetics is thought to have played a key role in dictating all major evolutionary transitions in the history of life on Earth. However, how exactly cellular energetics and metabolism come together to shape evolutionary paths is not well un
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1c795c62c7dc3946a182a77c17af276b
https://pubmed.ncbi.nlm.nih.gov/31397932
https://pubmed.ncbi.nlm.nih.gov/31397932
Autor:
Debika Choudhury, Supreet Saini
Starting from a parentalE. coliK-12 MG1655 strain, we evolve cells in five different carbon environments-glucose, arabinose, xylose, rhamnose, and a mixture of these four sugars (in a predefined ratio) for approximately 2,000 generations. At the end
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5d1065ed3f62f46f6cee03525581abb4
https://doi.org/10.1101/398578
https://doi.org/10.1101/398578
Autor:
Debika Choudhury, Supreet Saini
Lignocellulosic biomass is a promising feedstock for production of fuels and other value-added chemicals, produced by microbial conversion of sugars derived via hydrolysis. However, commercial utilization of lignocellulose is limited by the phenomeno
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::05486e64b24ffd370d3dbe89e67022ef
https://doi.org/10.1016/b978-0-444-63667-6.00011-0
https://doi.org/10.1016/b978-0-444-63667-6.00011-0
Starting with Savageau's pioneering work regarding demand rules for gene regulation from the 1970s, here, we choose the simplest transcription network and ask: how does the cell choose a particular regulatory topology from all available possibilities
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::35286645795b42d5c6cadbd89a36359a
https://doi.org/10.1101/014142
https://doi.org/10.1101/014142
Publikováno v:
Journal of Bioinformatics and Computational Biology. 15:1750024
From the definition, it appears that phenotypic robustness and evolvability of an organism are inversely related to each other. However, a number of studies exploring this question have found conflicting evidences in this regard. This question motiva
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::05444d0f23b129caa0ced3a0e9530ed4
https://doi.org/10.1142/s021972001750024x
https://doi.org/10.1142/s021972001750024x