Zobrazeno 1 - 10
of 41
pro vyhledávání: '"David K. Karig"'
Autor:
Kristin H. Loomis, Susan K. Wu, Amanda Ernlund, Kristina Zudock, Allison Reno, Kianna Blount, David K. Karig
Publikováno v:
Microbiome, Vol 9, Iss 1, Pp 1-17 (2021)
Abstract Background Skin, the largest organ of the human body by weight, hosts a diversity of microorganisms that can influence health. The microbial residents of the skin are now appreciated for their roles in host immune interactions, wound healing
Externí odkaz:
https://doaj.org/article/d483ec74b87a4d68a4f02a4d471aa4f9
Autor:
Collin M. Timm, Kristin Loomis, William Stone, Thomas Mehoke, Bryan Brensinger, Matthew Pellicore, Phillip P.A. Staniczenko, Curtisha Charles, Seema Nayak, David K. Karig
Publikováno v:
Microbiome, Vol 8, Iss 1, Pp 1-12 (2020)
Abstract Background The skin micro-environment varies across the body, but all sites are host to microorganisms that can impact skin health. Some of these organisms are true commensals which colonize a unique niche on the skin, while open exposure of
Externí odkaz:
https://doaj.org/article/9b63081fa8d34712b349ba5f8fc5c686
Publikováno v:
Frontiers in Microbiology, Vol 8 (2017)
Ecological stoichiometry (ES) uses organism-specific elemental content to explain differences in species life histories, species interactions, community organization, environmental constraints and even ecosystem function. Although ES has been success
Externí odkaz:
https://doaj.org/article/fac061c349634f5da74108ae90b4f322
Autor:
Kianna M Blount, Craig Howser, Kristina K Zudock, Abdulnaser Alkhalil, Lauren T. Moffatt, David K. Karig, Jeffrey W. Shupp, Collin M. Timm, Amanda Ernlund
Publikováno v:
Wound Repair and Regeneration. 29:766-776
Common treatment for venous leg wounds includes topical wound dressings with compression. At each dressing change, wounds are debrided and washed; however, the effect of the washing procedure on the wound microbiome has not been studied. We hypothesi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9a5add7af45d347d9dfd5a3e37083286
https://doi.org/10.1111/wrr.12926
https://doi.org/10.1111/wrr.12926
Autor:
Kristina K Zudock, Allison Reno, Susan K. Wu, Amanda Ernlund, Kristin H. Loomis, Kianna M Blount, David K. Karig
Publikováno v:
Microbiome
Microbiome, Vol 9, Iss 1, Pp 1-17 (2021)
Microbiome, Vol 9, Iss 1, Pp 1-17 (2021)
Background Skin, the largest organ of the human body by weight, hosts a diversity of microorganisms that can influence health. The microbial residents of the skin are now appreciated for their roles in host immune interactions, wound healing, coloniz
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::82c7b75ac50e7bdecdd930ec7e722a65
https://doi.org/10.1186/s40168-020-00963-1
https://doi.org/10.1186/s40168-020-00963-1
Background: Multiple types of error can enter metagenomics sample analysis, including contamination during sample collection, library preparation and sequencing, as well as incorrect taxonomic assignment by bioinformatics packages. Often, such errors
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::57b8a9cc5eba608baa114843c28adbc0
https://doi.org/10.21203/rs.3.rs-29648/v1
https://doi.org/10.21203/rs.3.rs-29648/v1
Publikováno v:
Handbook of Cell Biosensors ISBN: 9783319474052
Handbook of Cell Biosensors
Handbook of Cell Biosensors
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::380c1a6def2f9ea925388a49b038c65d
https://doi.org/10.1007/978-3-319-47405-2_134-1
https://doi.org/10.1007/978-3-319-47405-2_134-1
Publikováno v:
Ecological Complexity. 32:168-180
The Species Abundance Distribution (SAD) is a common metric for characterizing macroscopic ecological communities. Recently, this metric has been applied to analysis of microbial communities as well. However, as compared to macroscopic communities, s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c1f137c4d059fc074a6c3cbe153cea12
https://doi.org/10.1016/j.ecocom.2017.02.004
https://doi.org/10.1016/j.ecocom.2017.02.004
Autor:
Keyan Javadi, William F. Fagan, Rachel Flint, Philip L. F. Johnson, Shehar Awan, Jess Beattie, Sharon Bewick, Tejasvi Peesay, David K. Karig, Florian P. Breitwieser, Sonia Dogra, Cyrus Davati, Keshav Dixit, Samantha Bolten, Jake L. Weissman, Peter Thielen
Publikováno v:
BMC Bioinformatics
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-21 (2021)
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-21 (2021)
Background Even when microbial communities vary wildly in their taxonomic composition, their functional composition is often surprisingly stable. This suggests that a functional perspective could provide much deeper insight into the principles govern
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::24e8035023af8a082deac2ca927560b4
https://pubmed.ncbi.nlm.nih.gov/34098872
https://pubmed.ncbi.nlm.nih.gov/34098872
Autor:
Rachel Flint, Cyrus Davati, Florian P. Breitwieser, William F. Fagan, Eliezer Gurarie, Jake L. Weissman, Sharon Bewick, Jess Beattie, Peter Thielen, David K. Karig
Publikováno v:
Microbiome
Microbiome, Vol 7, Iss 1, Pp 1-15 (2019)
Microbiome, Vol 7, Iss 1, Pp 1-15 (2019)
Background The past decade of microbiome research has concentrated on cataloging the diversity of taxa in different environments. The next decade is poised to focus on microbial traits and function. Most existing methods for doing this perform pathwa
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ee41d9997b97a62d2dbd080dc7b538a9
https://doi.org/10.1186/s40168-019-0698-2
https://doi.org/10.1186/s40168-019-0698-2