Zobrazeno 1 - 10
of 20
pro vyhledávání: '"David Jukam"'
Autor:
Charles Limouse, Owen K. Smith, David Jukam, Kelsey A. Fryer, William J. Greenleaf, Aaron F. Straight
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-21 (2023)
Abstract Non-coding RNAs (ncRNAs) are transcribed throughout the genome and provide regulatory inputs to gene expression through their interaction with chromatin. Yet, the genomic targets and functions of most ncRNAs are unknown. Here we use chromati
Externí odkaz:
https://doaj.org/article/74255cc9080d48c4b0d8bf413c9fe9b2
Autor:
Jason C Bell, David Jukam, Nicole A Teran, Viviana I Risca, Owen K Smith, Whitney L Johnson, Jan M Skotheim, William James Greenleaf, Aaron F Straight
Publikováno v:
eLife, Vol 7 (2018)
RNA is a critical component of chromatin in eukaryotes, both as a product of transcription, and as an essential constituent of ribonucleoprotein complexes that regulate both local and global chromatin states. Here, we present a proximity ligation and
Externí odkaz:
https://doaj.org/article/0a371ee0cd154db8aeb19205e6b6b723
Autor:
Charles Limouse, Owen K. Smith, David Jukam, Kelsey A. Fryer, William J. Greenleaf, Aaron F. Straight
Non-coding RNAs (ncRNAs) are transcribed throughout the genome and provide regulatory inputs to gene expression through their interaction with chromatin. The genomic targets and regulatory mechanisms of most ncRNAs remain unknown. Using chromatin-ass
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::873839b6219df2028e95f5910eade076
https://doi.org/10.1101/2022.09.02.506418
https://doi.org/10.1101/2022.09.02.506418
Publikováno v:
Curr Biol
SummaryIn multicellular animals, the first major event after fertilization is the switch from maternal to zygotic control of development. During this transition, zygotic gene transcription is broadly activated in an otherwise quiescent genome in a pr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::38c1adb38d2dfe7d4be43c503543ab39
https://doi.org/10.1101/2021.04.18.440334
https://doi.org/10.1101/2021.04.18.440334
Publikováno v:
Methods in Molecular Biology ISBN: 9781071606797
Methods Mol Biol
Methods Mol Biol
RNAs play key roles in the cell as molecular intermediates for protein synthesis and as regulators of nuclear processes such as splicing, post-transcriptional regulation, or chromatin remodeling. Various classes of non-coding RNAs, including long non
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c76d17de6b8f20b4c35105dcf6d26efc
https://doi.org/10.1007/978-1-0716-0680-3_10
https://doi.org/10.1007/978-1-0716-0680-3_10
Publikováno v:
Developmental Cell. 42:316-332
The first major developmental transition in vertebrate embryos is the maternal-to-zygotic transition (MZT) when maternal mRNAs are degraded and zygotic transcription begins. During the MZT, the embryo takes charge of gene expression to control cell d
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dda7cd3f1d5c1161ac98a20e03491dda
https://doi.org/10.1016/j.devcel.2017.07.026
https://doi.org/10.1016/j.devcel.2017.07.026
Autor:
Charles Limouse, David Jukam, Viviana I. Risca, Jason C. Bell, Owen K. Smith, Aaron F. Straight
Publikováno v:
Curr Protoc Mol Biol
RNA is a fundamental component of chromatin. Noncoding RNAs (ncRNAs) can associate with chromatin to influence gene expression and chromatin state; many also act at long distances from their transcriptional origin. Yet we know almost nothing about th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3873d63791cbc85180cae0b570f33d81
https://pubmed.ncbi.nlm.nih.gov/30786161
https://pubmed.ncbi.nlm.nih.gov/30786161
Autor:
Claude Desplan, Hongtao Chen, Nisha Desai, Ansa Razzaq, Cleopatra Tsanis, Jens Rister, Pamela Boodram, David Jukam
Publikováno v:
Science. 350:1258-1261
Broad versus restricted expression Color vision in fruit flies requires the restricted expression of light-sensing rhodopsins with different wavelength sensitivities in subsets of photoreceptors. However, all photoreceptors express factors that trans
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::aa4213240bdc0201eb0529465076daa2
https://doi.org/10.1126/science.aab3417
https://doi.org/10.1126/science.aab3417
Autor:
Viviana I. Risca, William J. Greenleaf, Jason C. Bell, Owen K. Smith, Whitney L Johnson, Aaron F. Straight, Nicole A. Teran, David Jukam, Jan M. Skotheim
Publikováno v:
eLife, Vol 7 (2018)
eLife
eLife
RNA is a critical component of chromatin in eukaryotes, both as a product of transcription, and as an essential constituent of ribonucleoprotein complexes that regulate both local and global chromatin states. Here we present a proximity ligation and
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e7f730a10cabd5d82db08c09a4ddd239
https://doi.org/10.7554/elife.27024
https://doi.org/10.7554/elife.27024
Author response: Chromatin-associated RNA sequencing (ChAR-seq) maps genome-wide RNA-to-DNA contacts
Autor:
Viviana I. Risca, Owen K. Smith, Whitney L Johnson, Jan M. Skotheim, Nicole A. Teran, David Jukam, Aaron F. Straight, Jason C. Bell, William J. Greenleaf
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::678378c8c9970cfe0e8416b1ed75464a
https://doi.org/10.7554/elife.27024.037
https://doi.org/10.7554/elife.27024.037