Zobrazeno 1 - 10
of 62
pro vyhledávání: '"David G. Waterman"'
Autor:
Melanie Vollmar, James M. Parkhurst, Dominic Jaques, Arnaud Baslé, Garib N. Murshudov, David G. Waterman, Gwyndaf Evans
Publikováno v:
IUCrJ, Vol 7, Iss 2, Pp 342-354 (2020)
This study describes a method to estimate the likelihood of success in determining a macromolecular structure by X-ray crystallography and experimental single-wavelength anomalous dispersion (SAD) or multiple-wavelength anomalous dispersion (MAD) pha
Externí odkaz:
https://doaj.org/article/ddfba1d3f2eb453ca6f10a0722b1cf77
Autor:
Jessica F. Bruhn, Giovanna Scapin, Anchi Cheng, Brandon Q. Mercado, David G. Waterman, Thejusvi Ganesh, Sargis Dallakyan, Brandon N. Read, Travis Nieusma, Kyle W. Lucier, Megan L. Mayer, Nicole J. Chiang, Nicole Poweleit, Philip T. McGilvray, Timothy S. Wilson, Michael Mashore, Camille Hennessy, Sean Thomson, Bo Wang, Clinton S. Potter, Bridget Carragher
Publikováno v:
Frontiers in Molecular Biosciences, Vol 8 (2021)
The emerging field of microcrystal electron diffraction (MicroED) is of great interest to industrial researchers working in the drug discovery and drug development space. The promise of being able to routinely solve high-resolution crystal structures
Externí odkaz:
https://doaj.org/article/4e8f74f2a00c436abdbb1fc0f9db7a2d
Autor:
Emma V. Beale, David G. Waterman, Corey Hecksel, Jason van Rooyen, James B. Gilchrist, James M. Parkhurst, Felix de Haas, Bart Buijsse, Gwyndaf Evans, Peijun Zhang
Publikováno v:
Frontiers in Molecular Biosciences, Vol 7 (2020)
MicroED has recently emerged as a powerful method for the analysis of biological structures at atomic resolution. This technique has been largely limited to protein nanocrystals which grow either as needles or plates measuring only a few hundred nano
Externí odkaz:
https://doaj.org/article/a360773de2214620ac65ecc967425cdd
Autor:
James M. Parkhurst, Andrea Thorn, Melanie Vollmar, Graeme Winter, David G. Waterman, Luis Fuentes-Montero, Richard J. Gildea, Garib N. Murshudov, Gwyndaf Evans
Publikováno v:
IUCrJ, Vol 4, Iss 5, Pp 626-638 (2017)
An algorithm for modelling the background for each Bragg reflection in a series of X-ray diffraction images containing Debye–Scherrer diffraction from ice in the sample is presented. The method involves the use of a global background model which is
Externí odkaz:
https://doaj.org/article/d34cbd0f1e4e45eeb904b3c52112dd06
Publikováno v:
Acta Crystallographica Section A Foundations and Advances. 79:180-191
Because of the strong electron–atom interaction, the kinematic theory of diffraction cannot be used to describe the scattering of electrons by an assembly of atoms due to the strong dynamical diffraction that needs to be taken into account. In this
Autor:
David G. Waterman, Melanie Vollmar, Dominic Jaques, Garib N. Murshudov, Gwyndaf Evans, Arnaud Baslé, James M. Parkhurst
Publikováno v:
IUCrJ
IUCrJ, Vol 7, Iss 2, Pp 342-354 (2020)
IUCrJ, Vol 7, Iss 2, Pp 342-354 (2020)
Combining data-analysis statistics from crystallographic software with machine learning can predict the chances of experimental phasing success.
This study describes a method to estimate the likelihood of success in determining a macromolecular
This study describes a method to estimate the likelihood of success in determining a macromolecular
Autor:
John D. Westbrook, Jasmine Y. Young, Chenghua Shao, Zukang Feng, Vladimir Guranovic, Catherine L. Lawson, Brinda Vallat, Paul D. Adams, John M Berrisford, Gerard Bricogne, Kay Diederichs, Robbie P. Joosten, Peter Keller, Nigel W. Moriarty, Oleg V. Sobolev, Sameer Velankar, Clemens Vonrhein, David G. Waterman, Genji Kurisu, Helen M. Berman, Stephen K. Burley, Ezra Peisach
Publikováno v:
Journal of molecular biology, vol 434, iss 11
PDBx/mmCIF, Protein Data Bank Exchange (PDBx) macromolecular Crystallographic Information Framework (mmCIF), has become the data standard for structural biology. With its early roots in the domain of small-molecule crystallography, PDBx/mmCIF provide
Autor:
Benjamin H. Williams, Richard J. Gildea, James Beilsten-Edmands, Gwyndaf Evans, David McDonagh, David G. Waterman, Elena Pascal, Graeme Winter, Markus Gerstel, Nicholas E. Devenish
Publikováno v:
Protein Science : A Publication of the Protein Society
The DIALS software for the processing of X‐ray diffraction data is presented, with an emphasis on how the suite may be used as a toolkit for data processing. The description starts with an overview of the history and intent of the toolkit, usage as
Autor:
Anchi Cheng, William J. Rice, Clinton S. Potter, Sargis Dallakyan, Carl J. Negro, David G. Waterman, Bridget Carragher, Edward T. Eng, Jessica F. Bruhn
Publikováno v:
Protein Sci
Leginon is a system for automated data acquisition from a transmission electron microscope. Here we provide an updated summary of the overall Leginon architecture and an update of the current state of the package. We also highlight a few recent devel
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0aeb282aadf200459a3c0ab2f0df0e49
https://europepmc.org/articles/PMC7737759/
https://europepmc.org/articles/PMC7737759/
Autor:
Richard J. Gildea, James M. Parkhurst, James Beilsten-Edmands, Gwyndaf Evans, David G. Waterman, Graeme Winter
Publikováno v:
Acta Crystallographica. Section D, Structural Biology
A new scaling program is presented with new features to support multi-sweep workflows and analysis within the DIALS software package.
In processing X-ray diffraction data, the intensities obtained from integration of the diffraction images must
In processing X-ray diffraction data, the intensities obtained from integration of the diffraction images must