Zobrazeno 1 - 10
of 18
pro vyhledávání: '"David F Read"'
Autor:
David F Read, Edmond Atindaana, Kalyani Pyaram, Feng Yang, Sarah Emery, Anna Cheong, Katherine R Nakama, Cleo Burnett, Erin T Larragoite, Emilie Battivelli, Eric Verdin, Vicente Planelles, Cheong-Hee Chang, Alice Telesnitsky, Jeffrey M Kidd
Publikováno v:
PLoS Pathogens, Vol 15, Iss 10, p e1007903 (2019)
HIV-1 gene expression is regulated by host and viral factors that interact with viral motifs and is influenced by proviral integration sites. Here, expression variation among integrants was followed for hundreds of individual proviral clones within p
Externí odkaz:
https://doaj.org/article/b66bd893b1b64251b682ee2ef0cd7e33
Publikováno v:
PLoS Computational Biology, Vol 15, Iss 9, p e1007329 (2019)
Empirical evidence suggests that the malaria parasite Plasmodium falciparum employs a broad range of mechanisms to regulate gene transcription throughout the organism's complex life cycle. To better understand this regulatory machinery, we assembled
Externí odkaz:
https://doaj.org/article/e21370987aae4f69b4e801536fe9111b
Autor:
David F. Read, Gregory T. Booth, Riza M. Daza, Dana L. Jackson, Rula Green Gladden, Sanjay R. Srivatsan, Brent Ewing, Jennifer M. Franks, Cailyn H. Spurrell, Anne Roshella Gomes, Diana O’Day, Aishwarya A. Gogate, Beth K. Martin, Haleigh Larson, Christian Pfleger, Lea Starita, Yiing Lin, Jay Shendure, Shin Lin, Cole Trapnell
Publikováno v:
Communications Biology, Vol 7, Iss 1, Pp 1-14 (2024)
Abstract Sex differences and age-related changes in the human heart at the tissue, cell, and molecular level have been well-documented and many may be relevant for cardiovascular disease. However, how molecular programs within individual cell types v
Externí odkaz:
https://doaj.org/article/c78d59de759c46328c8bc8b520ab680e
Autor:
Yoshihiro Hasegawa, Jennifer M. Franks, Yusuke Tanaka, Yasuaki Uehara, David F. Read, Claire Williams, Sanjay Srivatsan, Lori B. Pitstick, Nikolaos M. Nikolaidis, Ciara M. Shaver, Huixing Wu, Jason C. Gardner, Andrew R. Osterburg, Jane J. Yu, Elizabeth J. Kopras, Steven L. Teitelbaum, Kathryn A. Wikenheiser-Brokamp, Cole Trapnell, Francis X. McCormack
Publikováno v:
bioRxiv
The pathophysiology of silicosis is poorly understood, limiting development of therapies for those who have been exposed to the respirable particle. We explored the mechanisms of silica-induced pulmonary fibrosis in a mouse model using multiple modal
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::252473b494e60975229929dfaecbbcbc
https://europepmc.org/articles/PMC9949165/
https://europepmc.org/articles/PMC9949165/
Autor:
David F Read, Gregory T Booth, Riza M Daza, Dana L Jackson, Rula Green Gladden, Sanjay R Srivatsan, Brent Ewing, Jennifer M Franks, Cailyn H Spurrell, Anne Roshella Gomes, Diana O’Day, Aishwarya A Gogate, Beth K Martin, Lea Starita, Yiing Lin, Jay Shendure, Shin Lin, Cole Trapnell
Sex differences and age-related changes in the human heart at the tissue, cell, and molecular level have been well-documented and many may be relevant for cardiovascular disease. However, how molecular programs within individual cell types vary acros
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::78a5e2ad749e3c77922df18cb42ac3c8
https://doi.org/10.1101/2022.07.12.496461
https://doi.org/10.1101/2022.07.12.496461
Autor:
Cole Trapnell, David F. Read, Jason S Debley, E. R. Vanderwall, Oghenemega Okoloko, Teal S. Hallstrand, M.P. White, Kaitlyn A Barrow, Steven F. Ziegler, L.M. Rich
Publikováno v:
bioRxiv
IntroductionCommon alphacoronaviruses and human rhinoviruses (HRV) induce type I and III interferon (IFN) responses important to limiting viral replication in the airway epithelium. In contrast, highly pathogenic betacoronaviruses including SARS-CoV-
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::42b696198c957ca025aaa2ebcfabaa3d
https://pubmed.ncbi.nlm.nih.gov/35484173
https://pubmed.ncbi.nlm.nih.gov/35484173
Publikováno v:
Gene. 612:19-24
TRIT1 is a highly conserved tRNA isopentenyl transferase that modifies a subset of tRNAs in human cells and is a candidate tumor suppressor in lung cancer in certain ethnic populations. The yeast homologue, Mod5, has similar tRNA-modifying functions
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::109adbd666b3fc7abe11e87bf69744fe
https://doi.org/10.1016/j.gene.2016.10.041
https://doi.org/10.1016/j.gene.2016.10.041
Autor:
Edmond Atindaana, Alice Telesnitsky, David F. Read, Jeffrey M. Kidd, S. Emery, Vicente Planelles, Feng Yang, Emilie Battivelli, Erin T. Larragoite, Anna Cheong, Kalyani Pyaram, Katherine R. Nakama, Cheong-Hee Chang, Eric Verdin
HIV-1 gene expression is regulated by host and viral factors that interact with viral motifs and is influenced by proviral integration sites. Here, expression variation among integrants was followed for hundreds of individual proviral clones within p
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a6bc236a5608855781606ad53f81ec74
https://doi.org/10.1101/666941
https://doi.org/10.1101/666941
Autor:
Antonio E, Chambers, Adam E, Richardson, David F, Read, Thomas J, Waller, Douglas A, Bernstein, Philip J, Smaldino
Publikováno v:
J Vis Exp
N(6)-isopentenyladenosine RNA modifications are functionally diverse and highly conserved among prokaryotes and eukaryotes. One of the most highly conserved N(6)-isopentenyladenosine modifications occurs at the A37 position in a subset of tRNAs. This
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::4c1c1a17284fc6b923bf957fdcc93c79
https://pubmed.ncbi.nlm.nih.gov/30346392
https://pubmed.ncbi.nlm.nih.gov/30346392
Autor:
Adam E. Richardson, Philip J. Smaldino, Antonio E. Chambers, Thomas J. Waller, Douglas A. Bernstein, David F. Read
Publikováno v:
Journal of Visualized Experiments.
N6-isopentenyladenosine RNA modifications are functionally diverse and highly conserved among prokaryotes and eukaryotes. One of the most highly conserved N6-isopentenyladenosine modifications occurs at the A37 position in a subset of tRNAs. This mod
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::955667fc69c632de3a8f4cd99bdd73c0
https://doi.org/10.3791/58100
https://doi.org/10.3791/58100