Zobrazeno 1 - 10
of 33
pro vyhledávání: '"David Dylus"'
Autor:
Anne‐Lyse Ducrest, Samuel Neuenschwander, Emanuel Schmid‐Siegert, Marco Pagni, Clément Train, David Dylus, Yannis Nevers, Alex Warwick Vesztrocy, Luis M. San‐Jose, Mélanie Dupasquier, Christophe Dessimoz, Ioannis Xenarios, Alexandre Roulin, Jérôme Goudet
Publikováno v:
Ecology and Evolution, Vol 10, Iss 5, Pp 2284-2298 (2020)
Abstract New genomic tools open doors to study ecology, evolution, and population genomics of wild animals. For the Barn owl species complex, a cosmopolitan nocturnal raptor, a very fragmented draft genome was assembled for the American species (Tyto
Externí odkaz:
https://doaj.org/article/16afd23122944a6486294a8fdff6eee1
Autor:
Yannis Nevers, David Dylus, Natasha M. Glover, Antoine Gürtler, Christophe Dessimoz, Adrian M. Altenhoff
Publikováno v:
F1000Research, Vol 9 (2022)
Knowledge of species phylogeny is critical to many fields of biology. In an era of genome data availability, the most common way to make a phylogenetic species tree is by using multiple protein-coding genes, conserved in multiple species. This method
Externí odkaz:
https://doaj.org/article/301c465a414740d4b91e92638ec7872a
Autor:
David Dylus, Trestan Pillonel, Onya Opota, Daniel Wüthrich, Helena M. B. Seth-Smith, Adrian Egli, Stefano Leo, Vladimir Lazarevic, Jacques Schrenzel, Sacha Laurent, Claire Bertelli, Dominique S. Blanc, Stefan Neuenschwander, Alban Ramette, Laurent Falquet, Frank Imkamp, Peter M. Keller, Andre Kahles, Simone Oberhaensli, Valérie Barbié, Christophe Dessimoz, Gilbert Greub, Aitana Lebrand
Publikováno v:
Frontiers in Microbiology, Vol 11 (2020)
Whole genome sequencing (WGS) enables high resolution typing of bacteria up to the single nucleotide polymorphism (SNP) level. WGS is used in clinical microbiology laboratories for infection control, molecular surveillance and outbreak analyses. Give
Externí odkaz:
https://doaj.org/article/c20aa348c6e94d02a156f6cbe0b95785
Publikováno v:
Nature Biotechnology
Current methods for inference of phylogenetic trees require running complex pipelines at substantial computational and labor costs, with additional constraints in sequencing coverage, assembly and annotation quality, especially for large datasets. To
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e44337caf23ab82e38ad25aa128444d4
https://hdl.handle.net/20.500.11850/610772
https://hdl.handle.net/20.500.11850/610772
Autor:
Maarten Vercruysse, David Dylus
Publikováno v:
Biochimica et Biophysica Acta (BBA) - Molecular Cell Research. 1870:119472
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b1acc192b64bffc6fc6c829c7df70c5c
https://doi.org/10.1016/j.bbamcr.2023.119472
https://doi.org/10.1016/j.bbamcr.2023.119472
Publikováno v:
bioRxiv
The inference of phylogenetic trees is foundational to biology. However, state-of-the-art phylogenomics requires running complex pipelines, at significant computational and labour costs, with additional constraints in sequencing coverage, assembly an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::52deea7947e7b3a75e51ad8a2b539620
https://doi.org/10.1101/2022.04.18.488678
https://doi.org/10.1101/2022.04.18.488678
Autor:
Gilbert Greub, Patricia M. Palagi, David Dylus, Trestan Pillonel, Aitana Lebrand, John W. A. Rossen, Adrian Egli, Helena M.B. Seth-Smith
Publikováno v:
Microbes and infection, 22(10), 626-634. ELSEVIER SCIENCE BV
The European Society of Clinical Microbiology and Infectious Diseases (ESCMID) workshop on genomics and metagenomics was held in Lausanne from 9th to 12th September 2019. As many as 68 participants from 20 countries from all 5 continents participated
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e3b955aa5a7833c8c048c0dfdf023929
https://doi.org/10.1016/j.micinf.2020.07.008
https://doi.org/10.1016/j.micinf.2020.07.008
Autor:
Adrian M. Altenhoff, Maximilian J. Telford, Bartlomiej Tomiczek, David Dylus, Natasha Glover, Steven Müller, Christophe Dessimoz, Daniel A. Dalquen, Magdalena Zarowiecki, Jeremy Levy, Alex Warwick Vesztrocy
Publikováno v:
Genome research, vol. 29, no. 7, pp. 1152-1163
Genome Research, 29 (7)
Genome Research, 29 (7)
Genomes and transcriptomes are now typically sequenced by individual laboratories but analyzing them often remains challenging. One essential step in many analyses lies in identifying orthologs—corresponding genes across multiple species—but this
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4442f9b3c272fc14662bff06e39acaeb
https://doi.org/10.1101/gr.243212.118
https://doi.org/10.1101/gr.243212.118
Publikováno v:
Development (Cambridge, England)
article-version (VoR) Version of Record
article-version (VoR) Version of Record
Regeneration as an adult developmental process is in many aspects similar to embryonic development. Although many studies point out similarities and differences, no large-scale, direct and functional comparative analyses between development and regen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dcee4f305470c782230c78cdbb9e288d
https://doi.org/10.1242/dev.180760
https://doi.org/10.1242/dev.180760
Autor:
David, Dylus, Trestan, Pillonel, Onya, Opota, Daniel, Wüthrich, Helena M B, Seth-Smith, Adrian, Egli, Stefano, Leo, Vladimir, Lazarevic, Jacques, Schrenzel, Sacha, Laurent, Claire, Bertelli, Dominique S, Blanc, Stefan, Neuenschwander, Alban, Ramette, Laurent, Falquet, Frank, Imkamp, Peter M, Keller, Andre, Kahles, Simone, Oberhaensli, Valérie, Barbié, Christophe, Dessimoz, Gilbert, Greub, Aitana, Lebrand
Publikováno v:
Frontiers in Microbiology
Whole genome sequencing (WGS) enables high resolution typing of bacteria up to the single nucleotide polymorphism (SNP) level. WGS is used in clinical microbiology laboratories for infection control, molecular surveillance and outbreak analyses. Give
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::971d9d5771d2d6b7f4a9690956ac0614
https://pubmed.ncbi.nlm.nih.gov/33424794
https://pubmed.ncbi.nlm.nih.gov/33424794