Zobrazeno 1 - 10
of 10
pro vyhledávání: '"David A. Velázquez-Ramírez"'
Autor:
Alberto Santos-Zavaleta, Mishael Sánchez-Pérez, Heladia Salgado, David A. Velázquez-Ramírez, Socorro Gama-Castro, Víctor H. Tierrafría, Stephen J. W. Busby, Patricia Aquino, Xin Fang, Bernhard O. Palsson, James E. Galagan, Julio Collado-Vides
Publikováno v:
BMC Biology, Vol 16, Iss 1, Pp 1-12 (2018)
Abstract Background Our understanding of the regulation of gene expression has benefited from the availability of high-throughput technologies that interrogate the whole genome for the binding of specific transcription factors and gene expression pro
Externí odkaz:
https://doaj.org/article/62842013a20a414b8d96469a17759c51
Autor:
Viridiana Villa-Islas, Alan Izarraras-Gomez, Maximilian Larena, Elizabeth Mejía Perez Campos, Marcela Sandoval-Velasco, Juan Esteban Rodríguez-Rodríguez, Miriam Bravo-Lopez, Barbara Moguel, Rosa Fregel, Ernesto Garfias-Morales, Jazeps Medina Tretmanis, David Alberto Velázquez-Ramírez, Alberto Herrera-Muñóz, Karla Sandoval, Maria A. Nieves-Colón, Gabriela Zepeda García Moreno, Fernando A. Villanea, Eugenia Fernández Villanueva Medina, Ramiro Aguayo-Haro, Cristina Valdiosera, Alexander G. Ioannidis, Andrés Moreno-Estrada, Flora Jay, Emilia Huerta-Sanchez, J. Víctor Moreno-Mayar, Federico Sánchez-Quinto, María C. Ávila-Arcos
Publikováno v:
Science. 380
Aridoamerica and Mesoamerica are two distinct cultural areas in northern and central Mexico, respectively, that hosted numerous pre-Hispanic civilizations between 2500 BCE and 1521 CE. The division between these regions shifted southward because of s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a81d37c10646e8e813792ebac69a8c59
https://doi.org/10.1126/science.add6142
https://doi.org/10.1126/science.add6142
Autor:
Viridiana Villa-Islas, Alan Izarraras-Gomez, Maximilian Larena, Elizabeth Mejía Perez Campos, Marcela Sandoval-Velasco, Juan Esteban Rodríguez-Rodríguez, Miriam Bravo-Lopez, Barbara Moguel, Rosa Fregel, Jazeps Medina Tretmanis, David Alberto Velázquez-Ramírez, Alberto Herrera-Muñóz, Karla Sandoval, Maria A. Nieves-Colón, Gabriela Zepeda, Fernando A Villanea, Eugenia Fernández Villanueva Medina, Ramiro Aguayo-Haro, Cristina Valdiosera, Alexander Ioannidis, Andrés Moreno-Estrada, Flora Jay, Emilia Huerta-Sanchez, Federico Sánchez-Quinto, María C. Ávila-Arcos
Aridoamerica and Mesoamerica are two distinct cultural areas that hosted numerous pre-Hispanic civilizations between 2,500 BCE and 1,521 CE. The division between these regions shifted southward due to severe droughts ca. 1,100 years ago, allegedly dr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::598b47158371ed7559efd09d8375b592
https://doi.org/10.1101/2022.06.19.496730
https://doi.org/10.1101/2022.06.19.496730
Autor:
David A. Velázquez-Ramírez, Cecilia Ishida-Gutiérrez, Socorro Gama-Castro, Citlalli Mejía-Almonte, Víctor H. Tierrafría, Julio Collado-Vides, Sara Martínez-Luna, Alberto Santos-Zavaleta, Oscar Lithgow-Serrano
Publikováno v:
Journal of Biomedical Semantics, Vol 10, Iss 1, Pp 1-14 (2019)
Journal of Biomedical Semantics
Journal of Biomedical Semantics
Background The ability to express the same meaning in different ways is a well-known property of natural language. This amazing property is the source of major difficulties in natural language processing. Given the constant increase in published lite
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::de188083d5b849c1c18c1c1cf316f7fb
http://link.springer.com/article/10.1186/s13326-019-0200-x
http://link.springer.com/article/10.1186/s13326-019-0200-x
Autor:
David A. Velázquez-Ramírez, Ron Caspi, César Bonavides-Martínez, Suzanne M. Paley, Daniel Weaver, Peter D. Karp, Markus Krummenacker, Julio Collado-Vides, Luis Muñiz-Rascado, Anamika Kothari, Alberto Santos-Zavaleta, Carol A. Fulcher, Richard Billington, Quang Ong, Martín Peralta-Gil, Mario Latendresse, Socorro Gama-Castro, Ian T. Paulsen, Amanda Mackie, Pallavi Subhraveti, Ingrid M. Keseler
Publikováno v:
Nucleic Acids Research
EcoCyc (EcoCyc.org) is a freely accessible, comprehensive database that collects and summarizes experimental data for Escherichia coli K-12, the best-studied bacterial model organism. New experimental discoveries about gene products, their function a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::446e62cbf5fb3512be82b049b095cc16
https://doi.org/10.1093/nar/gkw1003
https://doi.org/10.1093/nar/gkw1003
Autor:
James E. Galagan, Cecilia Ishida-Gutiérrez, Julio Collado-Vides, Socorro Gama-Castro, Kevin Alquicira-Hernández, César Bonavides-Martínez, Jair S. García-Sotelo, Alberto Santos-Zavaleta, Heladia Salgado, Luis Muñiz-Rascado, David A. Velázquez-Ramírez, Laura Gómez-Romero, Víctor Del Moral-Chávez, Carlos-Francisco Méndez-Cruz, Mishael Sánchez-Pérez, Pablo Peña-Loredo, Daniela Ledezma-Tejeida
Publikováno v:
Nucleic Acids Research
RegulonDB, first published 20 years ago, is a comprehensive electronic resource about regulation of transcription initiation of Escherichia coli K-12 with decades of knowledge from classic molecular biology experiments, and recently also from high-th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::110e2d03ec9378fc567540767d3b1846
https://pubmed.ncbi.nlm.nih.gov/30395280
https://pubmed.ncbi.nlm.nih.gov/30395280
Autor:
Mishael Sánchez-Pérez, Julio Collado-Vides, David A. Velázquez-Ramírez, Alberto Santos-Zavaleta, Ernesto Pérez-Rueda
Publikováno v:
BMC Genomics, Vol 20, Iss 1, Pp 1-13 (2019)
BMC Genomics
BMC Genomics
Background Crl, identified for curli production, is a small transcription factor that stimulates the association of the σS factor (RpoS) with the RNA polymerase core through direct and specific interactions, increasing the transcription rate of gene
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::55840999c9f23bfb6f14b4ea7b570f39
https://doi.org/10.1101/410621
https://doi.org/10.1101/410621
Autor:
James E. Galagan, Bernhard O. Palsson, Socorro Gama-Castro, Alberto Santos-Zavaleta, Stephen J. W. Busby, Víctor H. Tierrafría, Julio Collado-Vides, Heladia Salgado, Mishael Sánchez-Pérez, Patricia Aquino, Xin Fang, David A. Velázquez-Ramírez
Publikováno v:
Santos-Zavaleta, A, Sanchez-Perez, M, Salgado, H, Velazquez-Ramirez, D A, Gama-Castro, S, Tierrafria, V H, Busby, S J W, Aquino, P, Fang, X, Palsson, B O, Galagan, J E & Collado-Vides, J 2018, ' A unified resource for transcriptional regulation in Escherichia coli K-12 incorporating high-throughput-generated binding data into RegulonDB version 10.0 ', B M C Biology, vol. 16, 91 . https://doi.org/10.1186/s12915-018-0555-y
BMC Biology
BMC Biology, Vol 16, Iss 1, Pp 1-12 (2018)
BMC Biology
BMC Biology, Vol 16, Iss 1, Pp 1-12 (2018)
Background: Our understanding of the regulation of gene expression has benefited from the availability of high-throughput technologies that interrogate the whole genome for the binding of specific transcription factors and gene expression profiles. I
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6d400758903e01ef090ab522a7664f94
https://doi.org/10.1186/s12915-018-0555-y
https://doi.org/10.1186/s12915-018-0555-y
Autor:
David A. Velázquez-Ramírez, Socorro Gama-Castro, Mishael Sánchez-Pérez, Steve Busby, Xin Fang, Bernhard O. Palsson, Heladia Salgado, Alberto Santos-Zavaleta, Víctor H. Tierrafría, Julio Collado-Vides, James E. Galagan
Our understanding of the regulation of gene expression has been strongly benefited by the availability of high throughput technologies that enable questioning the whole genome for the binding of specific transcription factors and expression profiles.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5d6afdb54f10d31353ed33cec242ed4a
https://doi.org/10.1101/219006
https://doi.org/10.1101/219006
Autor:
David A. Velázquez-Ramírez, Moisés Santillán, Agustino Martínez-Antonio, Joel Sánchez-Mondragón
Publikováno v:
Molecular BioSystems. 8:2932
In the present work we study the transcription-factor regulatory network that controls the synthesis of flagella in E. coli. Our objective is to address how the transcription-factor dynamics (in terms of their promoter activities and associated rates
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::102e3e5adc5161ab9004b21fbba1baf3
https://doi.org/10.1039/c2mb25236h
https://doi.org/10.1039/c2mb25236h