Zobrazeno 1 - 10
of 147
pro vyhledávání: '"David A. Holcomb"'
Autor:
David A. Holcomb, Diana Riner, Benjamin Cowan, Zainab Salah, Wiley C. Jennings, Mia C. Mattioli, Jennifer L. Murphy
Publikováno v:
Emerging Infectious Diseases, Vol 30, Iss 10, Pp 2174-2177 (2024)
We performed chlorine inactivation experiments for Elizabethkingia anophelis and E. meningoseptica bacterial strains from clinical and environmental sources. Free chlorine concentration × contact time values
Externí odkaz:
https://doaj.org/article/fe9fde16e0c24ce1a69e7adeeed96caf
Autor:
Oliver Cumming, Vanessa Monteiro, Edna Viegas, Rassul Nala, Joe Brown, Jackie Knee, Jorge Ribeiro, David A Holcomb, Drew Capone, Virgílio António, Márcia Chiluvane, Victória Cumbane, Nália Ismael, Erin Kowalsky, Amanda Lai, Yarrow Linden, Elly Mataveia, Gouthami Rao
Publikováno v:
BMJ Open, Vol 13, Iss 6 (2023)
Introduction We previously assessed the effect of an onsite sanitation intervention in informal neighbourhoods of urban Maputo, Mozambique on enteric pathogen detection in children after 2 years of follow-up (Maputo Sanitation (MapSan) trial, Clinica
Externí odkaz:
https://doaj.org/article/ec5d50bb71754aefa31dc2a46a32328b
Autor:
David D. Holcomb, Katarzyna I. Jankowska, Nancy Hernandez, Kyle Laurie, Jacob Kames, Nobuko Hamasaki-Katagiri, Anton A. Komar, Michael DiCuccio, Chava Kimchi-Sarfaty
Publikováno v:
STAR Protocols, Vol 3, Iss 3, Pp 101648- (2022)
Summary: Here, we describe a bioinformatics pipeline that evaluates the interactions between coagulation-related proteins and genetic variants with SARS-CoV-2 proteins. This pipeline searches for host proteins that may bind to viral protein and ident
Externí odkaz:
https://doaj.org/article/a7839a0221ce406ea1d8b57270cee8d1
Autor:
Nadine Kotlarz, David A. Holcomb, A. B. M. Tanvir Pasha, Stacie Reckling, Judith Kays, Yi-Chun Lai, Sean Daly, Sivaranjani Palani, Erika Bailey, Virginia T. Guidry, Ariel Christensen, Steven Berkowitz, Jane A. Hoppin, Helena Mitasova, Lawrence S. Engel, Francis L. de los Reyes, Angela Harris
Publikováno v:
American Journal of Public Health. 113:79-88
Objectives. To compare 4 COVID-19 surveillance metrics in a major metropolitan area. Methods. We analyzed severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA in wastewater influent and primary solids in Raleigh, North Carolina, from Apri
Autor:
Aikaterini Alexaki, Jacob Kames, Gaya K. Hettiarachchi, John C. Athey, Upendra K. Katneni, Ryan C. Hunt, Nobuko Hamasaki-Katagiri, David D. Holcomb, Michael DiCuccio, Haim Bar, Anton A. Komar, Chava Kimchi-Sarfaty
Publikováno v:
F1000Research, Vol 9 (2020)
Ribosome profiling provides the opportunity to evaluate translation kinetics at codon level resolution. Here, we describe ribosome profiling data, generated from two HEK293T cell lines. The ribosome profiling data are composed of Ribo-seq (mRNA seque
Externí odkaz:
https://doaj.org/article/1a80c3483ae443bb80de7ba5bc14c567
Autor:
Drew Capone, Zaida Adriano, David Berendes, Oliver Cumming, Robert Dreibelbis, David A Holcomb, Jackie Knee, Ian Ross, Joe Brown
Publikováno v:
PLoS ONE, Vol 14, Iss 10, p e0224333 (2019)
Sanitary surveys are used in low- and middle-income countries to assess water, sanitation, and hygiene conditions, but have rarely been compared with direct measures of environmental fecal contamination. We conducted a cross-sectional assessment of s
Externí odkaz:
https://doaj.org/article/0236fa77e8c646498aff005ba522fb7e
Autor:
Troy Barker, Drew Capone, Heather K. Amato, Ryan Clark, Abigail Henderson, David A. Holcomb, Elizabeth Kim, Jillian Pape, Emily Parker, Thomas VanderYacht, Jay Graham, Joe Brown
Uncontained fecal wastes in cities may present exposure risks to the public. We collected discarded feces from public spaces in San Francisco for analysis by RT-qPCR for a range of enteric pathogens. Out of 59 samples, we found 12 (20%) were of human
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e8e5bc66529a6de3da7a5345a167d28b
https://doi.org/10.1101/2023.02.10.23285757
https://doi.org/10.1101/2023.02.10.23285757
Autor:
Trent Sumner, Oliver Cumming, Rassul Nalá, Jackie Knee, Jill R. Stewart, Joe Brown, Zaida Adriano, David A. Holcomb, Drew Capone
Publikováno v:
Environmental Science & Technology. 55:11667-11679
Fecal source tracking (FST) may be useful to assess pathways of fecal contamination in domestic environments and to estimate the impacts of water, sanitation, and hygiene (WASH) interventions in low-income settings. We measured two non-specific and t
Autor:
Upendra K. Katneni, Aikaterini Alexaki, Kyle Laurie, David D. Holcomb, Jacob Kames, Haim Bar, Nobuko Hamasaki-Katagiri, Chava Kimchi-Sarfaty
Publikováno v:
Am J Hum Genet
Predicting the effect of a mutated gene before the onset of symptoms of genetic diseases would greatly facilitate diagnosis and potentiate early intervention. There have been myriad attempts to predict the effects of single-nucleotide variants. Howev
Publikováno v:
Sci Total Environ
An increasing share of urinary tract infections (UTIs) are caused by extraintestinal pathogenic Escherichia coli (ExPEC) lineages that have also been identified in poultry and hogs with high genetic similarity to human clinical isolates. We investiga