Zobrazeno 1 - 10
of 20
pro vyhledávání: '"Daryl Eason"'
Autor:
Lara Urban, Allison K Miller, Daryl Eason, Deidre Vercoe, Megan Shaffer, Shaun P Wilkinson, Gert-Jan Jeunen, Neil J Gemmell, Andrew Digby
Publikováno v:
eLife, Vol 12 (2023)
We used non-invasive real-time genomic approaches to monitor one of the last surviving populations of the critically endangered kākāpō (Strigops habroptilus). We first established an environmental DNA metabarcoding protocol to identify the distrib
Externí odkaz:
https://doaj.org/article/49600abfa14645f4a766dba583a00e3c
Autor:
Andrew Digby, Daryl Eason, Alejandro Catalina, Michael Lierz, Stephanie Galla, Lara Urban, Marissa F. Le Lec, Joseph Guhlin, Tammy E. Steeves, Peter K. Dearden, Tineke Joustra, Caroline Lees, Tane Davis, Deidre Vercoe, Kākāpō Recovery Team
Publikováno v:
PeerJ, Vol 11, p e14675 (2023)
Background Animal conservation often requires intensive management actions to improve reproductive output, yet any adverse effects of these may not be immediately apparent, particularly in threatened species with small populations and long lifespans.
Externí odkaz:
https://doaj.org/article/0846a91f9b3144608bd360fb53b7c31c
Autor:
Nicolas Dussex, Tom van der Valk, Hernán E. Morales, Christopher W. Wheat, David Díez-del-Molino, Johanna von Seth, Yasmin Foster, Verena E. Kutschera, Katerina Guschanski, Arang Rhie, Adam M. Phillippy, Jonas Korlach, Kerstin Howe, William Chow, Sarah Pelan, Joanna D. Mendes Damas, Harris A. Lewin, Alex R. Hastie, Giulio Formenti, Olivier Fedrigo, Joseph Guhlin, Thomas W.R. Harrop, Marissa F. Le Lec, Peter K. Dearden, Leanne Haggerty, Fergal J. Martin, Vamsi Kodali, Françoise Thibaud-Nissen, David Iorns, Michael Knapp, Neil J. Gemmell, Fiona Robertson, Ron Moorhouse, Andrew Digby, Daryl Eason, Deidre Vercoe, Jason Howard, Erich D. Jarvis, Bruce C. Robertson, Love Dalén
Publikováno v:
Cell Genomics, Vol 1, Iss 1, Pp 100002- (2021)
Summary: The kākāpō is a flightless parrot endemic to New Zealand. Once common in the archipelago, only 201 individuals remain today, most of them descending from an isolated island population. We report the first genome-wide analyses of the speci
Externí odkaz:
https://doaj.org/article/d9e85cac600849db84e2a4f6f6510b9b
Autor:
Lara Urban, Allison K Miller, Daryl Eason, Deidre Vercoe, Megan Shaffer, Shaun P Wilkinson, Gert-Jan Jeunen, Neil J Gemmell, Andrew Digby
We used non-invasive real-time genomic approaches to monitor one of the last surviving populations of the critically endangered kākāpō (Strigops habroptilus). We first established an environmental DNA metabarcoding protocol to identify the distrib
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f43069fa89ac7ea9d8c622b487d55f7e
https://doi.org/10.1101/2022.11.14.516431
https://doi.org/10.1101/2022.11.14.516431
Autor:
Richard Hall, Tandy Warnow, Tanya M. Lama, Oliver A. Ryder, David Haussler, Matthew T. Biegler, Klaus-Peter Koepfli, Ivo Gut, Paul Flicek, Mark Chaisson, James Torrance, Guojie Zhang, Andrew J. Crawford, Federica Di Palma, Michael Hiller, Jennifer A. Marshall Graves, Sadye Paez, Sarah E. London, Mark Wilkinson, Kateryna D. Makova, Byung June Ko, Jimin George, Farooq O. Al-Ajli, Emma C. Teeling, George F. Turner, Robert H. S. Kraus, Sonja C. Vernes, Zev N. Kronenberg, Michelle Smith, Jonas Korlach, Daryl Eason, Jonathan Wood, Simona Secomandi, Claudio V. Mello, Arkarachai Fungtammasan, Arang Rhie, Tomas Marques-Bonet, Benedict Paten, Ekaterina Osipova, Richard Durbin, M. Thomas P. Gilbert, Beth Shapiro, Ivan Sović, Bruce C. Robertson, Richard E. Green, Eugene W. Myers, Leanne Haggerty, Sergey Koren, Martin Pippel, Bettina Haase, Patrick Masterson, Jay Ghurye, Maria Simbirsky, Samantha R. Friedrich, Chul Hee Lee, Luis R Nassar, Lindsey J. Cantin, Kerstin Howe, Erich D. Jarvis, Marlys L. Houck, Jason T. Howard, Jacquelyn Mountcastle, Mark Mooney, Paolo Franchini, Giulio Formenti, Siddarth Selvaraj, Robel E. Dagnew, Brett T. Hannigan, Brian P. Walenz, Alan Tracey, Heebal Kim, Constantina Theofanopoulou, Nicholas H. Putnam, Karen Clark, Iliana Bista, H. William Detrich, Dengfeng Guan, David Iorns, Andrew Digby, Trevor Pesout, Zemin Ning, Gregory Gedman, Woori Kwak, Maximilian Wagner, Joanna Collins, Harris A. Lewin, Hannes Svardal, Milan Malinsky, Byrappa Venkatesh, Françoise Thibaud-Nissen, Joana Damas, Andreas F. Kautt, Olivier Fedrigo, Christopher Dunn, William Chow, Warren E. Johnson, Yang Zhou, Adam M. Phillippy, Taylor Edwards, Paul Medvedev, Peter V. Lovell, Joyce V. Lee, Sylke Winkler, Stephen J. O'Brien, Wesley C. Warren, Alex Hastie, Marcela Uliano-Silva, Kevin L. Howe, Sarah B. Kingan, Fergal J. Martin, Christopher N. Balakrishnan, David F. Clayton, Ying Sims, Robert W. Murphy, Axel Meyer, Dave W Burt, Shane A. McCarthy, Sarah Pelan, Erik Garrison, Mark Diekhans, Frank Grützner, Gavin J. P. Naylor, Robert S. Harris, Hiram Clawson, Jinna Hoffman, Ann C Misuraca, J. H. Kim
Publikováno v:
Nature, 592, 737-746
Nature
Rhie, A, McCarthy, S A, Fedrigo, O, Damas, J, Formenti, G, Koren, S, Uliano-Silva, M, Chow, W, Fungtammasan, A, Kim, J, Lee, C, Ko, B J, Chaisson, M, Gedman, G L, Cantin, L J, Thibaud-Nissen, F, Haggerty, L, Bista, I, Smith, M, Haase, B, Mountcastle, J, Winkler, S, Paez, S, Howard, J, Vernes, S C, Lama, T M, Grutzner, F, Warren, W C, Balakrishnan, C N, Burt, D, George, J M, Biegler, M T, Iorns, D, Digby, A, Eason, D, Robertson, B, Edwards, T, Wilkinson, M, Turner, G, Meyer, A, Kautt, A F, Franchini, P, Detrich, H W, Svardal, H, Wagner, M, Naylor, G J P, Pippel, M, Malinsky, M, Mooney, M, Simbirsky, M, Hannigan, B T, Pesout, T, Houck, M, Misuraca, A, Kingan, S B, Hall, R, Kronenberg, Z, Sović, I, Dunn, C, Ning, Z, Hastie, A, Lee, J, Selvaraj, S, Green, R E, Putnam, N H, Gut, I, Ghurye, J, Garrison, E, Sims, Y, Collins, J, Pelan, S, Torrance, J, Tracey, A, Wood, J, Dagnew, R E, Guan, D, London, S E, Clayton, D F, Mello, C V, Friedrich, S R, Lovell, P V, Osipova, E, Al-Ajli, F O, Secomandi, S, Kim, H, Theofanopoulou, C, Hiller, M, Zhou, Y, Harris, R S, Makova, K D, Medvedev, P, Hoffman, J, Masterson, P, Clark, K, Martin, F, Howe, K, Flicek, P, Walenz, B P, Kwak, W, Clawson, H, Diekhans, M, Nassar, L, Paten, B, Kraus, R H S, Crawford, A J, Gilbert, M T P, Zhang, G, Venkatesh, B, Murphy, R W, Koepfli, K-P, Shapiro, B, Johnson, W E, Di Palma, F, Marques-Bonet, T, Teeling, E C, Warnow, T, Graves, J M, Ryder, O A, Haussler, D, O’Brien, S J, Korlach, J, Lewin, H A, Howe, K, Myers, E W, Durbin, R, Phillippy, A M & Jarvis, E D 2021, ' Towards complete and error-free genome assemblies of all vertebrate species ', Nature, vol. 592, no. 7856, pp. 737-746 . https://doi.org/10.1038/s41586-021-03451-0
Natureevents directory, 592(7856):737-746
Digital.CSIC. Repositorio Institucional del CSIC
instname
Dipòsit Digital de Documents de la UAB
Universitat Autònoma de Barcelona
Nature, 592, 7856, pp. 737-746
Nature
Rhie, A, McCarthy, S A, Fedrigo, O, Damas, J, Formenti, G, Koren, S, Uliano-Silva, M, Chow, W, Fungtammasan, A, Kim, J, Lee, C, Ko, B J, Chaisson, M, Gedman, G L, Cantin, L J, Thibaud-Nissen, F, Haggerty, L, Bista, I, Smith, M, Haase, B, Mountcastle, J, Winkler, S, Paez, S, Howard, J, Vernes, S C, Lama, T M, Grutzner, F, Warren, W C, Balakrishnan, C N, Burt, D, George, J M, Biegler, M T, Iorns, D, Digby, A, Eason, D, Robertson, B, Edwards, T, Wilkinson, M, Turner, G, Meyer, A, Kautt, A F, Franchini, P, Detrich, H W, Svardal, H, Wagner, M, Naylor, G J P, Pippel, M, Malinsky, M, Mooney, M, Simbirsky, M, Hannigan, B T, Pesout, T, Houck, M, Misuraca, A, Kingan, S B, Hall, R, Kronenberg, Z, Sović, I, Dunn, C, Ning, Z, Hastie, A, Lee, J, Selvaraj, S, Green, R E, Putnam, N H, Gut, I, Ghurye, J, Garrison, E, Sims, Y, Collins, J, Pelan, S, Torrance, J, Tracey, A, Wood, J, Dagnew, R E, Guan, D, London, S E, Clayton, D F, Mello, C V, Friedrich, S R, Lovell, P V, Osipova, E, Al-Ajli, F O, Secomandi, S, Kim, H, Theofanopoulou, C, Hiller, M, Zhou, Y, Harris, R S, Makova, K D, Medvedev, P, Hoffman, J, Masterson, P, Clark, K, Martin, F, Howe, K, Flicek, P, Walenz, B P, Kwak, W, Clawson, H, Diekhans, M, Nassar, L, Paten, B, Kraus, R H S, Crawford, A J, Gilbert, M T P, Zhang, G, Venkatesh, B, Murphy, R W, Koepfli, K-P, Shapiro, B, Johnson, W E, Di Palma, F, Marques-Bonet, T, Teeling, E C, Warnow, T, Graves, J M, Ryder, O A, Haussler, D, O’Brien, S J, Korlach, J, Lewin, H A, Howe, K, Myers, E W, Durbin, R, Phillippy, A M & Jarvis, E D 2021, ' Towards complete and error-free genome assemblies of all vertebrate species ', Nature, vol. 592, no. 7856, pp. 737-746 . https://doi.org/10.1038/s41586-021-03451-0
Natureevents directory, 592(7856):737-746
Digital.CSIC. Repositorio Institucional del CSIC
instname
Dipòsit Digital de Documents de la UAB
Universitat Autònoma de Barcelona
Nature, 592, 7856, pp. 737-746
High-quality and complete reference genome assemblies are fundamental for the application of genomics to biology, disease, and biodiversity conservation. However, such assemblies are available for only a few non-microbial species1,2,3,4. To address t
Autor:
Rebecca M. Gooley, Tammy E. Steeves, Jill A. Hamilton, Ilina Cubrinovska, Marjorie D. Matocq, Stephanie J. Galla, Yvette Couch-Lewis, Jana Wold, Anna W. Santure, Samantha Hauser, Liz Brown, Anne Richardson, Carolyn J. Hogg, Daryl Eason, Julie A. Heath, Emily K. Latch
Over the past 50 years conservation genetics has developed a substantive toolbox to inform species management. One of the most long-standing tools available to manage genetics - the pedigree - has been widely used to characterize diversity and maximi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c3bc634590a9529da6a5c2cecc5ae135
https://doi.org/10.22541/au.162577430.03067651/v2
https://doi.org/10.22541/au.162577430.03067651/v2
Autor:
Fiona Robertson, William Chow, Kerstin Howe, Alex Hastie, Thomas W. R. Harrop, Marissa F. Le Lec, Tom van der Valk, Erich D. Jarvis, David Díez-del-Molino, Andrew Digby, Harris A. Lewin, Bruce C. Robertson, Fergal J. Martin, David Iorns, Katerina Guschanski, Verena E. Kutschera, Deidre Vercoe, Michael Knapp, Hernán E. Morales, Nicolas Dussex, Sarah Pelan, Neil J. Gemmell, Arang Rhie, Joanna D. Mendes Damas, Love Dalén, Vamsi K. Kodali, Françoise Thibaud-Nissen, Ron Moorhouse, Jason T. Howard, Daryl Eason, Olivier Fedrigo, Yasmin Foster, Christopher W. Wheat, Adam M. Phillippy, Johanna von Seth, Joseph Guhlin, Jonas Korlach, Giulio Formenti, Peter K. Dearden, Leanne Haggerty
Publikováno v:
Digitala Vetenskapliga Arkivet-Academic Archive On-line
ORCID
Microsoft Academic Graph
Edinburgh Research Explorer
Dussex, N, Van Der Valk, T, Morales, H E, Wheat, C W, Díez-del-Molino, D, Von Seth, J, Foster, Y, Kutschera, V E, Guschanski, K, Rhie, A, Phillippy, A M, Korlach, J, Howe, K, Chow, W, Pelan, S, Mendes Damas, J D, Lewin, H A, Hastie, A R, Formenti, G, Fedrigo, O, Guhlin, J, Harrop, T W R, Le Lec, M F, Dearden, P K, Haggerty, L, Martin, F J, Kodali, V, Thibaud-Nissen, F, Iorns, D, Knapp, M, Gemmell, N J, Robertson, F, Moorhouse, R, Digby, A, Eason, D, Vercoe, D, Howard, J, Jarvis, E D, Robertson, B C & Dalén, L 2021, ' Population genomics of the critically endangered kākāpō ', Cell Genomics, pp. 10 e1-e9 . https://doi.org/10.1016/j.xgen.2021.100002
Cell genomics, vol 1, iss 1
Cell Genomics
Dussex, N, van der Valk, T, Morales, H E, Wheat, C W, Díez-del-Molino, D, von Seth, J, Foster, Y, Kutschera, V E, Guschanski, K, Rhie, A, Phillippy, A M, Korlach, J, Howe, K, Chow, W, Pelan, S, Mendes Damas, J D, Lewin, H A, Hastie, A R, Formenti, G, Fedrigo, O, Guhlin, J, Harrop, T W R, Le Lec, M F, Dearden, P K, Haggerty, L, Martin, F J, Kodali, V, Thibaud-Nissen, F, Iorns, D, Knapp, M, Gemmell, N J, Robertson, F, Moorhouse, R, Digby, A, Eason, D, Vercoe, D, Howard, J, Jarvis, E D, Robertson, B C & Dalén, L 2021, ' Population genomics of the critically endangered kākāpō ', Cell Genomics, vol. 1, no. 1, 100002 . https://doi.org/10.1016/j.xgen.2021.100002
ORCID
Microsoft Academic Graph
Edinburgh Research Explorer
Dussex, N, Van Der Valk, T, Morales, H E, Wheat, C W, Díez-del-Molino, D, Von Seth, J, Foster, Y, Kutschera, V E, Guschanski, K, Rhie, A, Phillippy, A M, Korlach, J, Howe, K, Chow, W, Pelan, S, Mendes Damas, J D, Lewin, H A, Hastie, A R, Formenti, G, Fedrigo, O, Guhlin, J, Harrop, T W R, Le Lec, M F, Dearden, P K, Haggerty, L, Martin, F J, Kodali, V, Thibaud-Nissen, F, Iorns, D, Knapp, M, Gemmell, N J, Robertson, F, Moorhouse, R, Digby, A, Eason, D, Vercoe, D, Howard, J, Jarvis, E D, Robertson, B C & Dalén, L 2021, ' Population genomics of the critically endangered kākāpō ', Cell Genomics, pp. 10 e1-e9 . https://doi.org/10.1016/j.xgen.2021.100002
Cell genomics, vol 1, iss 1
Cell Genomics
Dussex, N, van der Valk, T, Morales, H E, Wheat, C W, Díez-del-Molino, D, von Seth, J, Foster, Y, Kutschera, V E, Guschanski, K, Rhie, A, Phillippy, A M, Korlach, J, Howe, K, Chow, W, Pelan, S, Mendes Damas, J D, Lewin, H A, Hastie, A R, Formenti, G, Fedrigo, O, Guhlin, J, Harrop, T W R, Le Lec, M F, Dearden, P K, Haggerty, L, Martin, F J, Kodali, V, Thibaud-Nissen, F, Iorns, D, Knapp, M, Gemmell, N J, Robertson, F, Moorhouse, R, Digby, A, Eason, D, Vercoe, D, Howard, J, Jarvis, E D, Robertson, B C & Dalén, L 2021, ' Population genomics of the critically endangered kākāpō ', Cell Genomics, vol. 1, no. 1, 100002 . https://doi.org/10.1016/j.xgen.2021.100002
Summary The kākāpō is a flightless parrot endemic to New Zealand. Once common in the archipelago, only 201 individuals remain today, most of them descending from an isolated island population. We report the first genome-wide analyses of the specie
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a6b775dddab77763ab80222459c0854a
https://doi.org/10.1016/j.xgen.2021.100002
https://doi.org/10.1016/j.xgen.2021.100002
Autor:
Stephanie Galla, Liz Brown, Yvette Couch-Lewis, Ilina Cubrinovska, Daryl Eason, Rebecca Gooley, Jill Hamilton, Julie Heath, Samantha Hauser, Emily Latch, Marjorie Matocq, Anne Richardson, Jana Wold, Carolyn J. Hogg, Anna Santure, Tammy Steeves
Over the past 50 years conservation genetics has developed a substantive toolbox to inform species management. One of the most long-standing tools available to manage genetics - the pedigree - has been widely used to characterize diversity and maximi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::79bbb5fad9cff97ed0a1e9aeb45b7070
https://doi.org/10.22541/au.162577430.03067651/v1
https://doi.org/10.22541/au.162577430.03067651/v1
Autor:
Lara Urban, Allison Miller, Daryl Eason, Deidre Vercoe, Megan Shaffer, Shaun Wilkinson, Joseph Guhlin, Peter Dearden, Gert-Jan Jeunen, Neil Gemmell, Andrew Digby
Publikováno v:
SSRN Electronic Journal.
Autor:
Claudio V. Mello, H. William Detrich, Oliver A. Ryder, George F. Turner, Robert H. S. Kraus, Daryl Eason, Sergey Koren, Stephen J. O'Brien, Ivan Sović, Tandy Warnow, Dave W Burt, Martin Pippel, Mark Diekhans, Jonathan Wood, Sylke Winkler, Joana Damas, Benedict Paten, Shane A. McCarthy, Gregory Gedman, M. Thomas P. Gilbert, David F. Clayton, Erich D. Jarvis, Frank Grützner, Richard E. Green, Andrew J. Crawford, Federica Di Palma, Jason T. Howard, Fergal J. Martin, Brett T. Hannigan, Samantha R. Friedrich, Emma C. Teeling, David Iorns, Woori Kwak, Maximilian Wagner, Iliana Bista, Hiram Clawson, Milan Malinsky, Peter V. Lovell, Gavin J. P. Naylor, Robert S. Harris, Ekaterina Osipova, Sadye Paez, Christopher N. Balakrishnan, Eugene W. Myers, Byrappa Venkatesh, Brian P. Walenz, Warren E. Johnson, Nicholas H. Putnam, Harris A. Lewin, Hannes Svardal, Leanne Haggerty, Andreas F. Kautt, Tomas Marques-Bonet, Luis R Nassar, Maria Simbirsky, Christopher Dunn, William Chow, Marlys L. Houck, Paolo Franchini, Joanna Collins, Jinna Hoffman, Sonja C. Vernes, Alan Tracey, Siddarth Selvaraj, Sarah E. London, Ann C Misuraca, Heebal Kim, Byung June Ko, Trevor Pesout, Françoise Thibaud-Nissen, Jimin George, Jennifer A. Marshall Graves, Arang Rhie, Ying Sims, Mark Wilkinson, Robert W. Murphy, Dengfeng Guan, Axel Meyer, Richard Durbin, Arkarachai Fungtammasan, Sarah Pelan, Lindsey J. Cantin, Erik Garrison, Kerstin Howe, Farooq O. Al-Ajli, Zev N. Kronenberg, Michelle Smith, Paul Flicek, James Torrance, Guojie Zhang, J. H. Kim, Richard Hall, Tanya M. Lama, David Haussler, Matthew T. Biegler, Klaus-Peter Koepfli, Beth Shapiro, Bettina Haase, Andrew Digby, Wesley C. Warren, Alex Hastie, Adam M. Phillippy, Paul Medvedev, Marcela Uliano-Silva, Mark Mooney, Constantina Theofanopoulou, Karen Clark, Chul Hee Lee, Zemin Ning, Olivier Fedrigo, Taylor Edwards, Simona Secomandi, Joyce V. Lee, Jonas Korlach, Patrick Masterson, Jay Ghurye, Jacquelyn Mountcastle, Giulio Formenti, Yang Zhou, Kevin L. Howe, Sarah B. Kingan, Kateryna D. Makova
High-quality and complete reference genome assemblies are fundamental for the application of genomics to biology, disease, and biodiversity conservation. However, such assemblies are only available for a few non-microbial species1–4. To address thi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ab73960cd65340ab6a1b83ca4de58db9
https://doi.org/10.1101/2020.05.22.110833
https://doi.org/10.1101/2020.05.22.110833