Zobrazeno 1 - 10
of 17
pro vyhledávání: '"Darren, Platt"'
Autor:
Kurt H. Lamour, Joann Mudge, Daniel Gobena, Oscar P. Hurtado-Gonzales, Jeremy Schmutz, Alan Kuo, Neil A. Miller, Brandon J. Rice, Sylvain Raffaele, Liliana M. Cano, Arvind K. Bharti, Ryan S. Donahoo, Sabra Finley, Edgar Huitema, Jon Hulvey, Darren Platt, Asaf Salamov, Alon Savidor, Rahul Sharma, Remco Stam, Dylan Storey, Marco Thines, Joe Win, Brian J. Haas, Darrell L. Dinwiddie, Jerry Jenkins, James R. Knight, Jason P. Affourtit, Cliff S. Han, Olga Chertkov, Erika A. Lindquist, Chris Detter, Igor V. Grigoriev, Sophien Kamoun, Stephen F. Kingsmore
Publikováno v:
Molecular Plant-Microbe Interactions, Vol 25, Iss 10, Pp 1350-1360 (2012)
The oomycete vegetable pathogen Phytophthora capsici has shown remarkable adaptation to fungicides and new hosts. Like other members of this destructive genus, P. capsici has an explosive epidemiology, rapidly producing massive numbers of asexual spo
Externí odkaz:
https://doaj.org/article/122d1955f18e4063abf5a5e27542151c
Autor:
Kristy Michelle Hawkins, Darren Platt, Max G. Schubert, Sunil S. Chandran, Andrew A. Horwitz, Jack D. Newman, Tina Mahatdejkul-Meadows, Jessica M. Walter, Stephanie H. Kung, Aaron D. Hernday, Wayne Szeto
Publikováno v:
Methods in Molecular Biology ISBN: 9781493997350
CRISPR-Cas has proven to be a powerful tool for precision genetic engineering in a variety of difficult genetic systems. In the highly tractable yeast S. cerevisiae, CRISPR-Cas can be used to conduct multiple engineering steps in parallel, allowing f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ad30205bac9a685c020b058739f269cf
https://doi.org/10.1007/978-1-4939-9736-7_3
https://doi.org/10.1007/978-1-4939-9736-7_3
Autor:
Max G. Schubert, Erin H. Wilson, Brian L. Hawthorne, James W. Weis, Christopher D. Reeves, Michael Bissell, Shiori Sagawa, Jed Dean, Darren Platt
Publikováno v:
ACS Synthetic Biology. 5:471-478
We describe here the Genotype Specification Language (GSL), a language that facilitates the rapid design of large and complex DNA constructs used to engineer genomes. The GSL compiler implements a high-level language based on traditional genetic nota
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0d2aff39a50f5e4ca110db0ccb38e2d7
https://doi.org/10.1021/acssynbio.5b00194
https://doi.org/10.1021/acssynbio.5b00194
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 1772
High quality DNA design tools are becoming increasingly important as synthetic biology continues to increase the rate and throughput of building and testing genetic constructs. To make effective use of expanded build and test capacity, genotype desig
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::a53994913d89acd4f9d9336a733f6de6
https://pubmed.ncbi.nlm.nih.gov/29754240
https://pubmed.ncbi.nlm.nih.gov/29754240
Publikováno v:
Synthetic Biology ISBN: 9781493977949
High quality DNA design tools are becoming increasingly important as synthetic biology continues to increase the rate and throughput of building and testing genetic constructs. To make effective use of expanded build and test capacity, genotype desig
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::36a733cc608b909d3fb8141af407ec7d
https://doi.org/10.1007/978-1-4939-7795-6_21
https://doi.org/10.1007/978-1-4939-7795-6_21
Autor:
Aaron D. Hernday, Sunil S. Chandran, Stephanie H. Kung, Wayne Szeto, Jessica M. Walter, Max G. Schubert, Tina Mahatdejkul-Meadows, Kristy Michelle Hawkins, Darren Platt, Jack D. Newman, Andrew A. Horwitz
Publikováno v:
Horwitz, AA; Walter, JM; Schubert, MG; Kung, SH; Hawkins, K; Platt, DM; et al.(2015). Efficient Multiplexed Integration of Synergistic Alleles and Metabolic Pathways in Yeasts via CRISPR-Cas. Cell Systems, 1(1), 88-96. doi: 10.1016/j.cels.2015.02.001. UC Merced: Retrieved from: http://www.escholarship.org/uc/item/01d6s8m1
Cell systems, vol 1, iss 1
Cell systems, vol 1, iss 1
© 2015 The Authors. Summary CRISPR-Cas genome engineering in yeast has relied on preparation of complex expression plasmids for multiplexed gene knockouts and point mutations. Here we show that co-transformation of a single linearized plasmid with m
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d27ed41b04db0f82fc173913678fa9e8
https://doi.org/10.1016/j.cels.2015.02.001
https://doi.org/10.1016/j.cels.2015.02.001
Autor:
Kerrie Barry, Catalina Patricia Morales Murillo, Rotem Sorek, Dan E. Robertson, Xinning Zhang, Edward Kirton, Peter Luginbuhl, Jared R. Leadbetter, Brian D. Green, Nikos C. Kyrpides, Hector Garcia Martin, Daniel Dalevi, Cathy Chang, Luis G. Acosta, Mircea Podar, Justin T. Stege, Philip Hugenholtz, Giselle Tamayo, Gordana Djordjevic, Isidore Rigoutsos, Victor Kunin, Natalia Ivanova, Nahla Aboushadi, Susannah G. Tringe, Eric G. Matson, Michelle H. Cayouette, Eric J. Mathur, Edward M. Rubin, Majid Ghassemian, Myriam Hernandez, Natalia Mikhailova, Asaf Salamov, Falk Warnecke, Alice C. McHardy, Darren Platt, Ernest Szeto, Toby Richardson, Elizabeth A. Ottesen, Julita Madejska
Publikováno v:
Nature. 450:560-565
From the standpoints of both basic research and biotechnology, there is considerable interest in reaching a clearer understanding of the diversity of biological mechanisms employed during lignocellulose degradation. Globally, termites are an extremel
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::338fdcd7c7f16bdfcb5220f803ad8370
https://doi.org/10.1038/nature06269
https://doi.org/10.1038/nature06269
Autor:
Tina Lösekann, Hector Garcia Martin, Ernest Szeto, Cleber C. Ouverney, Elisabeth M. Bik, Natalia Ivanova, David A. Relman, Darren Platt, Stephen R. Quake, Philip Hugenholtz, Yann Marcy
Publikováno v:
Proceedings of the National Academy of Sciences. 104:11889-11894
We have developed a microfluidic device that allows the isolation and genome amplification of individual microbial cells, thereby enabling organism-level genomic analysis of complex microbial ecosystems without the need for culture. This device was u
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cfd8fe8d9e4bf24afc4b6c3ad5921e16
https://doi.org/10.1073/pnas.0704662104
https://doi.org/10.1073/pnas.0704662104
Autor:
Madhukar S. Dasika, Paul W. Hill, Savita Ganesan, Robert Mans, Kirsten R. Benjamin, Eugene Antipov, Jacob R. Lenihan, Diana Eng, Lan Xu, Hanxiao Jiang, Annie Ening Tsong, Abhishek Murarka, Lishan Zhao, Robert H. Dahl, Jefferson Lai, Lily Chao, Lauren Raetz, Kristy Michelle Hawkins, Poonam R. Saija, Yoseph Tsegaye, Chi-Li Liu, Christopher D. Reeves, Darren Platt, Gale Wichmann, Youngnyun Kim, Jared W. Wenger, Tina Mahatdejkul-Meadows, Joshua S. Leng, Victor F. Holmes, Adam L. Meadows, Patrick J. Westfall, Timothy S. Gardner, Peter K. Jackson, Anna Tai
Publikováno v:
Nature. 537(7622)
Yeast central carbon metabolism has been engineered to achieve a more efficient isoprenoid biosynthesis pathway, an advance that brings commodity-scale production of such compounds a step closer. These authors have re-engineered the central carbon me
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::26bd8d0b5a6ec4e082e212124fa28c67
https://pubmed.ncbi.nlm.nih.gov/27654918
https://pubmed.ncbi.nlm.nih.gov/27654918
Autor:
Asif T. Chinwalla, LaDeana W. Hillier, Dmitry Varabei, Jacqueline E. Schein, René L. Warren, Asim Siddiqui, Xiaoqiu Huang, Marco A. Marra, Martin Krzywinski, James W. Kronstad, Steven J.M. Jones, Wesley C. Warren, David N. Messina, Richard K. Wilson, Shiaw-Pyng Yang, John W. Wallis, Darren Platt
Publikováno v:
Genome Research. 16:768-775
We describe a targeted approach to improve the contiguity of whole-genome shotgun sequence (WGS) assemblies at run-time, using information from Bacterial Artificial Chromosome (BAC)-based physical maps. Clone sizes and overlaps derived from clone fin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::06a37a3e5547ea9bbe79706df13b4393
https://doi.org/10.1101/gr.5090606
https://doi.org/10.1101/gr.5090606