Zobrazeno 1 - 10 of 10 pro vyhledávání: '"Darío Guerrero-Fernández"'
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Akademický článek
Why Assembling Plant Genome Sequences Is So Challenging
Autor: Pedro Seoane, Hicham Benzerki, Rocío Bautista, Darío Guerrero-Fernández, Manuel Gonzalo Claros, Noé Fernández-Pozo
Publikováno v: Biology, Vol 1, Iss 2, Pp 439-459 (2012)
In spite of the biological and economic importance of plants, relatively few plant species have been sequenced. Only the genome sequence of plants with relatively small genomes, most of them angiosperms, in particular eudicots, has been determined. T
Externí odkaz: https://doaj.org/article/9085aa727adf4ea0bfa2fbcd56ecf655
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2
SCBI_MapReduce, a New Ruby Task-Farm Skeleton for Automated Parallelisation and Distribution in Chunks of Sequences: The Implementation of a Boosted Blast+
Autor: Juan Falgueras, Darío Guerrero-Fernández, M. Gonzalo Claros
Publikováno v: Computational Biology Journal. 2013:1-12
Current genomic analyses often require the managing and comparison of big data using desktop bioinformatic software that was not developed regarding multicore distribution. The task-farm SCBI_MAPREDUCE is intended to simplify the trivial parallelisat
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::1794541d143a266dc5af11f01063a856
https://doi.org/10.1155/2013/707540
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4
ReprOlive: a database with linked data for the olive tree (Olea europaea L.) reproductive transcriptome
Autor: Juan de Dios Alché, Adoración Zafra, Antonio J. Castro, M. Gonzalo Claros, Ismael Navas-Delgado, Darío Guerrero-Fernández, José F. Aldana-Montes, Ana Medina-García, Francisco M. Cánovas, Pedro Seoane, Trinidad Castillo-Castillo, Rosario Carmona
Publikováno v: Digital.CSIC. Repositorio Institucional del CSIC
instname
Frontiers in Plant Science
Frontiers in Plant Science, Vol 6 (2015)
Plant reproductive transcriptomes have been analyzed in different species due to the agronomical and biotechnological importance of plant reproduction. Here we presented an olive tree reproductive transcriptome database with samples from pollen and p
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::09c49533a47275a13c2e60ccd0394e3e
http://hdl.handle.net/10261/132309
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6
De novo assembly of maritime pine transcriptome Implications for forest breeding and biotechnology
Autor: Javier Canales, Christophe Klopp, Marina Rueda-López, Hicham Benzekri, Luc Harvengt, Darío Guerrero-Fernández, Pedro Seoane, Grégoire Le Provost, Rafael A. Cañas, Céline Noirot, Concepción Ávila, Francisco M. Cánovas, Marie-Anne Lelu-Walter, Vanessa Castro-Rodríguez, Francisco R. Cantón, Philippe Label, Rocío Bautista, M. Gonzalo Claros, François Ehrenmann, Caroline Teyssier, Isabelle Lesur, Andreia S. Rodrigues, Josefa Gómez-Maldonado, María Teresa Cervera, Alexandre Morel, Céline Lalanne, Noe Fernandez-Pozo, Célia Miguel, María Angeles Guevara, Christophe Plomion, Jean-François Trontin, Isabelle Reymond, Angel García-Gutiérrez
Publikováno v: Repositorio de Resultados de Investigación del INIA
Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria INIA
Plant Biotechnology Journal
Plant Biotechnology Journal, 2014, 12 (3), pp.286-299. ⟨10.1111/pbi.12136⟩
Plant Biotechnology Journal, Wiley, 2014, 12 (3), pp.286-299. ⟨10.1111/pbi.12136⟩
INIA: Repositorio de Resultados de Investigación del INIA
Article fédérateur entre toutes les équipes Européennes travaillant sur le pin maritime. Assemblage du transcriptome des données venant de France (INRA Orléans + INRA Pierroton) + Espagne + Portugal = projet Sustainpine; International audience;
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::21ac35165110c517b8213dc79f4fd0d2
http://hdl.handle.net/20.500.12792/5692
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7
GENote v.β: A Web Tool Prototype for Annotation of Unfinished Sequences in Non-model Eukaryotes
Autor: Francisco M. Cánovas, Noe Fernandez-Pozo, Concepción Ávila, Darío Guerrero-Fernández, Rocío Bautista, M. Gonzalo Claros, Josefa Gómez-Maldonado
Publikováno v: Bioinformatics for Personalized Medicine ISBN: 9783642280610
JBI
De novo identification of genes in newly-sequenced eukaryotic genomes is based on sensors, which are not available in non-model organisms. Many annotation tools have been developed and most of them require sequence training, computer skills and acces
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::8d2f2174889450963a6aee07fd574f26
https://doi.org/10.1007/978-3-642-28062-7_7
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8
EuroPineDB A high-coverage web database for maritime pine transcriptome
Autor: Francisco M. Cánovas, Darío Guerrero-Fernández, Concepción Ávila, M. Ángeles Guevara, Francisco R. Cantón, Rocío Bautista, M. Gonzalo Claros, Pedro Perdiguero, Álvaro Soto, Sara M. Díaz-Moreno, Javier Canales, Noe Fernandez-Pozo, M. Teresa Cervera, Arantxa Flores-Monterroso, Ricardo J. Ordás, Carmen Collada, David P. Villalobos
Publikováno v: Repositorio de Resultados de Investigación del INIA
Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria INIA
BMC Genomics
BMC Genomics, ISSN 1471-2164, 2011, No. 12
Archivo Digital UPM
instname
INIA: Repositorio de Resultados de Investigación del INIA
RUO. Repositorio Institucional de la Universidad de Oviedo
BMC Genomics, Vol 12, Iss 1, p 366 (2011)
This study was supported by the Spanish Ministerio de Ciencia e Innovación [AGL2009-12139-C02-02, BIO2009-07490], the European Union [PLE2009-0016] and the Junta de Andalucía [CVI-6075 and BIO-114]
Fernández-Pozo, N., Canales, J., Guerrero-Fe
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b4bc9b6d0907b88019ce3e53bc627c9a
http://hdl.handle.net/20.500.12792/1449
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9
A reliable pipeline for a transcriptome reference in Non-Model Species
Autor: Noe Fernandez-Pozo, Darío Guerrero-Fernández, M. Gonzalo Claros, Hicham Benzekri, Rocío Bautista
Publikováno v: EMBnet.journal. 19:38
Here it is presented a pipeline for obtaining a reliable transcriptome in non-model species, such as pine and sole, using NGS reads from natural, heterozygotic populations. The pipeline includes pre-processing, assembly, reconciliation, annotation an
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::5e19e9f322f9d91376bd850c9a26d416
https://doi.org/10.14806/ej.19.a.611
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10
De novo assembly, characterization and functional annotation of Senegalese sole (Solea senegalensis) and common sole (Solea solea) transcriptomes: integration in a database and design of a microarray
Autor: M. Gonzalo Claros, Diego Crespo, Josep V. Planas, Zambonino Jose, Marian Ponce, David Mazurais, Manuel Manchado, Hicham Benzekri, Rocío Bautista, Darío Guerrero-Fernández, Sabine Nidelet, Marta Gut, Mireia Rovira, Laureana Rebordinos, Carlos Infante, Noe Fernandez-Pozo, Manuel A. Merlo, Xavier Cousin, Marie-Laure Bégout, Paula Armesto
Publikováno v: BMC Genomics
BMC Genomics, BioMed Central, 2014, 15:952, pp.1-18. ⟨10.1186/1471-2164-15-952⟩
BMC Genomics (15:952), 1-18. (2014)
BMC Genomics, 2014, 15, pp.952. ⟨10.1186/1471-2164-15-952⟩
BMC Genomics, BioMed Central, 2014, 15, pp.952. ⟨10.1186/1471-2164-15-952⟩
Bmc Genomics (1471-2164) (Biomed Central Ltd), 2014-11, Vol. 15, P.
Background Senegalese sole (Solea senegalensis) and common sole (S. solea) are two economically and evolutionary important flatfish species both in fisheries and aquaculture. Although some genomic resources and tools were recently described in these
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::89701bd79be1db2e87429c12facee82b
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