Zobrazeno 1 - 10
of 84
pro vyhledávání: '"Daniel S, Read"'
Autor:
Jonathan Warren, Sean Butler, Nick Evens, Laura Hunt, Martyn Kelly, Lindsay Newbold, Daniel S. Read, Joe D. Taylor, Kerry Walsh
Publikováno v:
Metabarcoding and Metagenomics, Vol 8, Iss , Pp 169-186 (2024)
DNA sequencing of diatom assemblages from biofilms has already been used to assess the ecological status of freshwater in the UK. However, recent work using DNA data from these biofilms suggests that alternate metrics that capture the broader taxonom
Externí odkaz:
https://doaj.org/article/21fab61ada964343bea5f5bbbd4f286b
Autor:
Graham S. Sellers, Christopher L. Jerde, Lynsey R. Harper, Marco Benucci, Cristina Di Muri, Jianlong Li, Graeme Peirson, Kerry Walsh, Tristan Hatton-Ellis, Willie Duncan, Alistair Duguid, Dave Ottewell, Nigel Willby, Alan Law, Colin W. Bean, Ian J. Winfield, Daniel S. Read, Lori Lawson Handley, Bernd Hänfling
Publikováno v:
Metabarcoding and Metagenomics, Vol 8, Iss , Pp 121-143 (2024)
Environmental DNA (eDNA) metabarcoding is transforming biodiversity monitoring in aquatic environments. Such an approach has been developed and deployed for monitoring lake fish communities in Great Britain, where the method has repeatedly shown a co
Externí odkaz:
https://doaj.org/article/545f1f97144841708295c267636822fc
Autor:
Amy C. Thorpe, Amy Anderson, Tim Goodall, Stephen J. Thackeray, Stephen C. Maberly, James A. Bendle, Hyun S. Gweon, Daniel S. Read
Publikováno v:
Environmental DNA, Vol 4, Iss 6, Pp 1340-1355 (2022)
Abstract Microbial communities play important roles in lake ecosystems and are sensitive to environmental change. However, our understanding of their responses to long‐term change such as eutrophication is limited, as long‐term lake monitoring is
Externí odkaz:
https://doaj.org/article/f78f132bbde142e98dbe2e77af0001cf
Autor:
Ben A. Woodcock, Anna E. Oliver, Lindsay K. Newbold, H. Soon Gweon, Daniel S. Read, Ujala Sayed, Joanna Savage, Jim Bacon, Emily Upcott, Katherine Howell, Katharine Turvey, David B. Roy, M. Gloria Pereira, Darren Sleep, Arran Greenop, Richard F. Pywell
Publikováno v:
Scientific Reports, Vol 12, Iss 1, Pp 1-13 (2022)
Abstract We use a national citizen science monitoring scheme to quantify how agricultural intensification affects honeybee diet breadth (number of plant species). To do this we used DNA metabarcoding to identify the plants present in 527 honey sample
Externí odkaz:
https://doaj.org/article/ca39888da5594d9f8a3d22e7e734667d
Autor:
William Matlock, Samuel Lipworth, Kevin K Chau, Manal AbuOun, Leanne Barker, James Kavanagh, Monique Andersson, Sarah Oakley, Marcus Morgan, Derrick W Crook, Daniel S Read, Muna Anjum, Liam P Shaw, Nicole Stoesser, REHAB Consortium
Publikováno v:
eLife, Vol 12 (2023)
Plasmids enable the dissemination of antimicrobial resistance (AMR) in common Enterobacterales pathogens, representing a major public health challenge. However, the extent of plasmid sharing and evolution between Enterobacterales causing human infect
Externí odkaz:
https://doaj.org/article/e3bd1e1c87d8403d99468a1752dfeab3
Autor:
Richard P. Smith, Hannah E. May, Manal AbuOun, Emma Stubberfield, Daniel Gilson, Kevin K. Chau, Derrick W. Crook, Liam P. Shaw, Daniel S. Read, Nicole Stoesser, Maria Jose Vilar, Muna F. Anjum
Publikováno v:
Frontiers in Microbiology, Vol 14 (2023)
IntroductionThere are concerns that antimicrobial usage (AMU) is driving an increase in multi-drug resistant (MDR) bacteria so treatment of microbial infections is becoming harder in humans and animals. The aim of this study was to evaluate factors,
Externí odkaz:
https://doaj.org/article/41e391ac8cda4c14921a76588c900780
Autor:
Caterina M. Antognazza, Robert J. Britton, Daniel S. Read, Tim Goodall, Anna Mantzouratou, Vanessa De Santis, Peter Davies, Miran Aprahamian, Elizabeth Franklin, Emilie A. Hardouin, Demetra Andreou
Publikováno v:
Environmental DNA, Vol 3, Iss 2, Pp 458-471 (2021)
Abstract Assessments of fish communities tend to rely on capture‐based methods that, due to sampling biases, can underestimate actual species richness. Alternatively, environmental DNA (eDNA) based metabarcoding is a noncapture approach that infers
Externí odkaz:
https://doaj.org/article/6bb9e23009a44f9f8559555246e16867
Autor:
Briony Jones, Tim Goodall, Paul B. L. George, Hyun S. Gweon, Jeremy Puissant, Daniel S. Read, Bridget A. Emmett, David A. Robinson, Davey L. Jones, Robert I. Griffiths
Publikováno v:
Frontiers in Microbiology, Vol 12 (2021)
High-throughput sequencing 16S rRNA gene surveys have enabled new insights into the diversity of soil bacteria, and furthered understanding of the ecological drivers of abundances across landscapes. However, current analytical approaches are of limit
Externí odkaz:
https://doaj.org/article/f5c315811951496d9d6c2b4c81d93c0d
Autor:
H. Soon Gweon, Liam P. Shaw, Jeremy Swann, Nicola De Maio, Manal AbuOun, Rene Niehus, Alasdair T. M. Hubbard, Mike J. Bowes, Mark J. Bailey, Tim E. A. Peto, Sarah J. Hoosdally, A. Sarah Walker, Robert P. Sebra, Derrick W. Crook, Muna F. Anjum, Daniel S. Read, Nicole Stoesser, on behalf of the REHAB consortium
Publikováno v:
Environmental Microbiome, Vol 14, Iss 1, Pp 1-15 (2019)
Abstract Background Shotgun metagenomics is increasingly used to characterise microbial communities, particularly for the investigation of antimicrobial resistance (AMR) in different animal and environmental contexts. There are many different approac
Externí odkaz:
https://doaj.org/article/0d44895d887e4f3a9d6d056e7219808b
Autor:
Anna E. Oliver, Lindsay K. Newbold, Hyun S. Gweon, Daniel S. Read, Ben A. Woodcock, Richard F. Pywell
Publikováno v:
MethodsX, Vol 8, Iss , Pp 101303- (2021)
Worldwide honeybees (Apis mellifera L.) are one of the most widely kept domesticated animals, supporting domestic and commercial livelihoods through the production of honey and wax, as well as in the delivery of pollination services to crops. Quantif
Externí odkaz:
https://doaj.org/article/def98e0508464541bfb9befd4a13a792