Zobrazeno 1 - 10
of 98
pro vyhledávání: '"Daniel J. Turner"'
Autor:
Deepak Thirunavukarasu, Lauren Y. Cheng, Ping Song, Sherry X. Chen, Mitesh J. Borad, Lawrence Kwong, Phillip James, Daniel J. Turner, David Yu Zhang
Publikováno v:
Genome Biology, Vol 22, Iss 1, Pp 1-17 (2021)
Abstract We develop the Oncogene Concatenated Enriched Amplicon Nanopore Sequencing (OCEANS) method, in which variants with low variant allele frequency (VAFs) are amplified and subsequently concatenated for Nanopore Sequencing. OCEANS allows accurat
Externí odkaz:
https://doaj.org/article/4bf551b9432b4350a7d2d7853a93be54
Autor:
Claudia M. B. Carvalho, Zeynep Coban-Akdemir, Hadia Hijazi, Bo Yuan, Matthew Pendleton, Eoghan Harrington, John Beaulaurier, Sissel Juul, Daniel J. Turner, Rupa S. Kanchi, Shalini N. Jhangiani, Donna M. Muzny, Richard A. Gibbs, Baylor-Hopkins Center for Mendelian Genomics, Pawel Stankiewicz, John W. Belmont, Chad A. Shaw, Sau Wai Cheung, Neil A. Hanchard, V. Reid Sutton, Patricia I. Bader, James R. Lupski
Publikováno v:
Genome Medicine, Vol 11, Iss 1, Pp 1-14 (2019)
Abstract Background Intrachromosomal triplications (TRP) can contribute to disease etiology via gene dosage effects, gene disruption, position effects, or fusion gene formation. Recently, post-zygotic de novo triplications adjacent to copy-number neu
Externí odkaz:
https://doaj.org/article/9879805980e143e1af4e72fdff58ff03
Publikováno v:
Case Reports in Infectious Diseases, Vol 2019 (2019)
We present the case of a 92-year-old man with septic arthritis of a prosthetic hip joint due to Streptococcus salivarius one week following a high-risk dental procedure despite preprocedure amoxicillin. S. salivarius is a commensal bacterium of the h
Externí odkaz:
https://doaj.org/article/b078fb368aec4acda05adeb132558f5b
Autor:
Neil L. Funwie, Amy N. Cain, Brian Z. Fanning, Serena A. Hageman, Malorie Mullens, Travis K. Roberts, Daniel J. Turner, Cammi N. Valdez, Robert W. Vaughan, Henok G. Ermias, Jon D. Silversides, Stephen J. Archibald, Timothy J. Hubin, Timothy J. Prior
Publikováno v:
Acta Crystallographica Section E: Crystallographic Communications, Vol 71, Iss 9, Pp 1073-1076 (2015)
The title compound, [FeCl2(C14H30N4)]PF6, contains Fe3+ coordinated by the four nitrogen atoms of an ethylene cross-bridged cyclam macrocycle and two cis chloride ligands in a distorted octahedral environment. In contrast to other similar compounds t
Externí odkaz:
https://doaj.org/article/c13a266c2ec1433492ae79774d9dfca3
Autor:
Jessica M. Schmit, Daniel J. Turner, Robert A. Hromas, John R. Wingard, Randy A. Brown, Ying Li, Marilyn M. Li, William B. Slayton, Christopher R. Cogle
Publikováno v:
Leukemia Research Reports, Vol 4, Iss 1, Pp 24-27 (2015)
Here we report two new RUNX1 mutations in one patient with congenital thrombocytopenia that transformed into a high grade myelodysplastic syndrome with myelomonocytic features. The first mutation was a nucleotide base substitution from guanine to ade
Externí odkaz:
https://doaj.org/article/e7e90398f7fd46e3850b777a48c9ca9f
Autor:
Aditya S. Deshpande, Netha Ulahannan, Matthew Pendleton, Xiaoguang Dai, Lynn Ly, Julie M. Behr, Stefan Schwenk, Will Liao, Michael A. Augello, Carly Tyer, Priyesh Rughani, Sarah Kudman, Huasong Tian, Hannah G. Otis, Emily Adney, David Wilkes, Juan Miguel Mosquera, Christopher E. Barbieri, Ari Melnick, David Stoddart, Daniel J. Turner, Sissel Juul, Eoghan Harrington, Marcin Imieliński
Publikováno v:
Nature Biotechnology. 40:1488-1499
High-order three-dimensional (3D) interactions between more than two genomic loci are common in human chromatin, but their role in gene regulation is unclear. Previous high-order 3D chromatin assays either measure distant interactions across the geno
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fb8ee58670be9489c6175a124e6506d6
https://doi.org/10.1038/s41587-022-01289-z
https://doi.org/10.1038/s41587-022-01289-z
Autor:
Edward F. DeLong, Andrew Burger, Paul Den Uyl, John Beaulaurier, Elaine Luo, Daniel J. Turner, Matthew Pendelton, Eoghan D. Harrington, John M. Eppley, Sissel Juul, Xiaoguang Dai
Publikováno v:
Genome Research. 30:437-446
Viruses are the most abundant biological entities on Earth and play key roles in host ecology, evolution, and horizontal gene transfer. Despite recent progress in viral metagenomics, the inherent genetic complexity of virus populations still poses te
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::177e27d159716d81ba0ed2d1b648a1e5
https://doi.org/10.1101/gr.251686.119
https://doi.org/10.1101/gr.251686.119
Autor:
Lauren Y. Cheng, David Zhang, Mitesh J. Borad, Lawrence N. Kwong, Ping Song, Phillip James, Sherry X. Chen, Daniel J. Turner, Deepak Thirunavukarasu
Publikováno v:
Genome Biology
Genome Biology, Vol 22, Iss 1, Pp 1-17 (2021)
Genome Biology, Vol 22, Iss 1, Pp 1-17 (2021)
Nanopore sequencing is more than 10-fold faster than sequencing-by-synthesis and provides reads that are roughly 100-fold longer. However, nanopore sequencing’s 7.5% intrinsic error rate renders it difficult to call somatic mutations with low varia
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d885531d590ae6db02756c7a36a10d62
http://europepmc.org/articles/PMC8419911
http://europepmc.org/articles/PMC8419911
Publikováno v:
Case Reports in Infectious Diseases
Case Reports in Infectious Diseases, Vol 2019 (2019)
Case Reports in Infectious Diseases, Vol 2019 (2019)
We present the case of a 92-year-old man with septic arthritis of a prosthetic hip joint due to Streptococcus salivarius one week following a high-risk dental procedure despite preprocedure amoxicillin. S. salivarius is a commensal bacterium of the h
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3e40926453780cc2f2cf67238ccb66b7
https://doi.org/10.1155/2019/8109280
https://doi.org/10.1155/2019/8109280
Autor:
Shalini N. Jhangiani, Chad A. Shaw, Rupa S. Kanchi, Patricia I. Bader, John Beaulaurier, V. Reid Sutton, Pawel Stankiewicz, Bo Yuan, Sissel Juul, James R. Lupski, Eoghan D. Harrington, Richard A. Gibbs, Claudia M.B. Carvalho, Neil A. Hanchard, John W. Belmont, Daniel J. Turner, Hadia Hijazi, Zeynep Coban-Akdemir, Matthew Pendleton, Sau Wai Cheung, Donna M. Muzny
Publikováno v:
Genome Medicine, Vol 11, Iss 1, Pp 1-14 (2019)
Genome Medicine
Genome Medicine
Background Intrachromosomal triplications (TRP) can contribute to disease etiology via gene dosage effects, gene disruption, position effects, or fusion gene formation. Recently, post-zygotic de novo triplications adjacent to copy-number neutral geno
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f50a9f15a03ddf43a7c8a6c72793cb19
http://link.springer.com/article/10.1186/s13073-019-0633-y
http://link.springer.com/article/10.1186/s13073-019-0633-y