Zobrazeno 1 - 10
of 14
pro vyhledávání: '"Daniel, Rokhsar"'
Autor:
Jeffrey Jolly, Yuko Hasegawa, Chikatoshi Sugimoto, Lin Zhang, Risa Kawaura, Gustavo Sanchez, Daria Gavriouchkina, Ferdinand Marlétaz, Daniel Rokhsar
Publikováno v:
Frontiers in Marine Science, Vol 9 (2022)
Cephalopod research remains limited by the inability to culture species under laboratory conditions for multiple generations to provide continuous access to animals at all stages of the life cycle. Here, we describe a multi-generational laboratory cu
Externí odkaz:
https://doaj.org/article/71ac96ec8e444276b64ccbd047514309
Autor:
Sean P. Gordon, Bruno Contreras-Moreira, Joshua J. Levy, Armin Djamei, Angelika Czedik-Eysenberg, Virginia S. Tartaglio, Adam Session, Joel Martin, Amy Cartwright, Andrew Katz, Vasanth R. Singan, Eugene Goltsman, Kerrie Barry, Vinh Ha Dinh-Thi, Boulos Chalhoub, Antonio Diaz-Perez, Ruben Sancho, Joanna Lusinska, Elzbieta Wolny, Candida Nibau, John H. Doonan, Luis A. J. Mur, Chris Plott, Jerry Jenkins, Samuel P. Hazen, Scott J. Lee, Shengqiang Shu, David Goodstein, Daniel Rokhsar, Jeremy Schmutz, Robert Hasterok, Pilar Catalan, John P. Vogel
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-16 (2020)
Existing plant pan-genomic studies usually report considerable intraspecific whole gene presence-absence variation. Here, the authors use pan-genomic approach to reveal gradual polyploid genome evolution by analyzing of Brachypodium hybridum and its
Externí odkaz:
https://doaj.org/article/cc64c72bac854d8fbcca53abca35d3ac
Autor:
John T. Lovell, Jerry Jenkins, David B. Lowry, Sujan Mamidi, Avinash Sreedasyam, Xiaoyu Weng, Kerrie Barry, Jason Bonnette, Brandon Campitelli, Chris Daum, Sean P. Gordon, Billie A. Gould, Albina Khasanova, Anna Lipzen, Alice MacQueen, Juan Diego Palacio-Mejía, Christopher Plott, Eugene V. Shakirov, Shengqiang Shu, Yuko Yoshinaga, Matt Zane, Dave Kudrna, Jason D. Talag, Daniel Rokhsar, Jane Grimwood, Jeremy Schmutz, Thomas E. Juenger
Publikováno v:
Nature Communications, Vol 9, Iss 1, Pp 1-10 (2018)
Drought is a major factor limiting crop productivity. Here, via eQTL analysis and comparative genomics, the authors show compensatory evolution between trans-regulatory loci and transcription factor binding sites that shape the drought response netwo
Externí odkaz:
https://doaj.org/article/bfe67d457c31498a862b03de2a70396c
Autor:
Manoj K Sharma, Rita Sharma, Peijian Cao, Jerry Jenkins, Laura E Bartley, Morgan Qualls, Jane Grimwood, Jeremy Schmutz, Daniel Rokhsar, Pamela C Ronald
Publikováno v:
PLoS ONE, Vol 7, Iss 4, p e33892 (2012)
The perennial grass, switchgrass (Panicum virgatum L.), is a promising bioenergy crop and the target of whole genome sequencing. We constructed two bacterial artificial chromosome (BAC) libraries from the AP13 clone of switchgrass to gain insight int
Externí odkaz:
https://doaj.org/article/8f18536045ae418d94a4b91b5c4e7c8f
Autor:
Bernd Schierwater, Kai Kamm, Mansi Srivastava, Daniel Rokhsar, Rafael D Rosengarten, Stephen L Dellaporta
Publikováno v:
PLoS ONE, Vol 3, Iss 8, p e2457 (2008)
The evolution of ANTP genes in the Metazoa has been the subject of conflicting hypotheses derived from full or partial gene sequences and genomic organization in higher animals. Whole genome sequences have recently filled in some crucial gaps for the
Externí odkaz:
https://doaj.org/article/d9b99667a82c4bfa8c06e95e00f0cb59
Autor:
Evangelos Georganas, Steven Hofmeyr, Leonid Oliker, Rob Egan, Daniel Rokhsar, Aydin Buluc, Katherine Yelick
Publikováno v:
Exascale Scientific Applications ISBN: 9781315277400
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::9180d8c88283bb9af6e6dfce83331011
https://doi.org/10.1201/b21930-18
https://doi.org/10.1201/b21930-18
Autor:
Colin T, Kelleher, Readman, Chiu, Heesun, Shin, Ian E, Bosdet, Martin I, Krzywinski, Chris D, Fjell, Jennifer, Wilkin, Tongming, Yin, Stephen P, DiFazio, Johar, Ali, Jennifer K, Asano, Susanna, Chan, Alison, Cloutier, Noreen, Girn, Stephen, Leach, Darlene, Lee, Carrie A, Mathewson, Teika, Olson, Katie, O'connor, Anna-Liisa, Prabhu, Duane E, Smailus, Jeffery M, Stott, Miranda, Tsai, Natasja H, Wye, George S, Yang, Jun, Zhuang, Robert A, Holt, Nicholas H, Putnam, Julia, Vrebalov, James J, Giovannoni, Jane, Grimwood, Jeremy, Schmutz, Daniel, Rokhsar, Steven J M, Jones, Marco A, Marra, Gerald A, Tuskan, Jörg, Bohlmann, Brian E, Ellis, Kermit, Ritland, Carl J, Douglas, Jacqueline E, Schein
Publikováno v:
The Plant journal : for cell and molecular biology. 50(6)
As part of a larger project to sequence the Populus genome and generate genomic resources for this emerging model tree, we constructed a physical map of the Populus genome, representing one of the few such maps of an undomesticated, highly heterozygo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::61713208c7f1b7cf067678188a0f7d1d
https://pubmed.ncbi.nlm.nih.gov/17488239
https://pubmed.ncbi.nlm.nih.gov/17488239
Autor:
Diego Martinez, Luis F Larrondo, Nik Putnam, Maarten D Sollewijn Gelpke, Katherine Huang, Jarrod Chapman, Kevin G Helfenbein, Preethi Ramaiya, J Chris Detter, Frank Larimer, Pedro M Coutinho, Bernard Henrissat, Randy Berka, Dan Cullen, Daniel Rokhsar
Publikováno v:
Nature Biotechnology. 22:899-899
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::46642902175f959d05b9d35d8228a1ba
https://doi.org/10.1038/nbt0704-899b
https://doi.org/10.1038/nbt0704-899b
Autor:
Diego Martinez, Luis F Larrondo, Nik Putnam, Maarten D Sollewijn Gelpke, Katherine Huang, Jarrod Chapman, Kevin G Helfenbein, Preethi Ramaiya, J Chris Detter, Frank Larimer, Pedro M Coutinho, Bernard Henrissat, Randy Berka, Dan Cullen, Daniel Rokhsar
Publikováno v:
Nature Biotechnology. 22:899-899
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::10a68373f5d77578c137930ba5b1f01a
https://doi.org/10.1038/nbt0704-899a
https://doi.org/10.1038/nbt0704-899a