Enabling FAIR data in Earth and environmental science with community-centric (meta)data reporting formats.

Autor: Crystal-Ornelas R; Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Github, San Francisco, CA, 94107, USA., Varadharajan C; Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. cvaradharajan@lbl.gov., O'Ryan D; Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Environmental Studies Department, California State University, Sacramento, 6000 Jed Smith Dr, Sacramento, CA, 95819, USA., Beilsmith K; Argonne National Laboratory, Lemont, IL, 60439, USA., Bond-Lamberty B; Pacific Northwest National Laboratory, Joint Global Change Research Institute at the University of Maryland-College Park, College Park, MD, 20740, USA., Boye K; Environmental Geochemistry Group, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA, 94025, USA., Burrus M; Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA., Cholia S; Scientific Data Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA., Christianson DS; Scientific Data Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA., Crow M; Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37830, USA., Damerow J; Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA., Ely KS; Environmental and Climate Sciences Department, Brookhaven National Laboratory, Upton, NY, 11973, USA., Goldman AE; Pacific Northwest National Laboratory, Richland, WA, 99354, USA., Heinz SL; Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37830, USA., Hendrix VC; Scientific Data Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA., Kakalia Z; Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA., Mathes K; Integrated Life Sciences, Virginia Commonwealth University, Richmond, VA, 23284, USA., O'Brien F; Scientific Data Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA., Pennington SC; Pacific Northwest National Laboratory, Joint Global Change Research Institute at the University of Maryland-College Park, College Park, MD, 20740, USA., Robles E; Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA., Rogers A; Environmental and Climate Sciences Department, Brookhaven National Laboratory, Upton, NY, 11973, USA., Simmonds M; Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Pivot Bio, 2910 Seventh Street, Berkeley, CA, 94710, USA., Velliquette T; Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37830, USA., Weisenhorn P; Argonne National Laboratory, Lemont, IL, 60439, USA., Welch JN; Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37830, USA., Whitenack K; Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA., Agarwal DA; Scientific Data Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.

Publikováno v: Scientific data [Sci Data] 2022 Nov 14; Vol. 9 (1), pp. 700. Date of Electronic Publication: 2022 Nov 14.

Correction for Vangay et al., "Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities".

Autor: Vangay P; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Burgin J; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Johnston A; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA., Beck KL; IBM Almaden Research Center, San Jose, California, USA., Berrios DC; NASA Ames Research Center, Moffett Field, California, USA., Blumberg K; Biosystems Engineering Department, University of Arizona, Tucson, Arizona, USA., Canon S; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Chain P; Los Alamos National Laboratory, Los Alamos, New Mexico, USA., Chandonia JM; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Christianson D; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Costes SV; NASA Ames Research Center, Moffett Field, California, USA., Damerow J; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Duncan WD; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Dundore-Arias JP; California State University, Monterey Bay, California, USA., Fagnan K; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Galazka JM; NASA Ames Research Center, Moffett Field, California, USA., Gibbons SM; Institute for Systems Biology, Seattle, Washington, USA.; Department of Bioengineering, University of Washington, Seattle, Washington, USA., Hays D; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Hervey J; Center for Bio/Molecular Science & Engineering, Naval Research Laboratory, Washington, DC, USA., Hu B; Los Alamos National Laboratory, Los Alamos, New Mexico, USA., Hurwitz BL; Biosystems Engineering Department, University of Arizona, Tucson, Arizona, USA., Jaiswal P; Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, USA., Joachimiak MP; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Kinkel L; Department of Plant Pathology, University of Minnesota, St. Paul, Minnesota, USA., Ladau J; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Martin SL; Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA., McCue LA; Pacific Northwest National Laboratory, Richland, Washington, USA., Miller K; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Mouncey N; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Mungall C; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Pafilis E; Institute of Marine Biology Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Heraklion, Crete, Greece., Reddy TBK; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Richardson L; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Roux S; Department of Energy Joint Genome Institute, Berkeley, California, USA., Schriml LM; University of Maryland School of Medicine, Institute for Genome Sciences, Baltimore, Maryland, USA., Shaffer JP; Department of Pediatrics, School of Medicine, University of California, San Diego, California, USA., Sundaramurthi JC; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Thompson LR; Northern Gulf Institute, Mississippi State University, Mississippi State, Mississippi, USA.; Ocean Chemistry and Ecosystems Division, Atlantic Oceanographic and Meteorological Laboratory, National Oceanic and Atmospheric Administration, Miami, Florida, USA., Timme RE; US Food and Drug Administration, Center for Food Safety and Applied Nutrition, College Park, Maryland, USA., Zheng J; Department of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA., Wood-Charlson EM; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Eloe-Fadrosh EA; Lawrence Berkeley National Laboratory, Berkeley, California, USA eaeloefadrosh@lbl.gov.

Publikováno v: MSystems [mSystems] 2021 May 04; Vol. 6 (3). Date of Electronic Publication: 2021 May 04.

Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities.

Autor: Vangay P; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Burgin J; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Johnston A; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA., Beck KL; IBM Almaden Research Center, San Jose, California, USA., Berrios DC; NASA Ames Research Center, Moffett Field, California, USA., Blumberg K; Biosystems Engineering Department, University of Arizona, Tucson, Arizona, USA., Canon S; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Chain P; Los Alamos National Laboratory, Los Alamos, New Mexico, USA., Chandonia JM; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Christianson D; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Costes SV; NASA Ames Research Center, Moffett Field, California, USA., Damerow J; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Duncan WD; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Dundore-Arias JP; California State University, Monterey Bay, California, USA., Fagnan K; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Galazka JM; NASA Ames Research Center, Moffett Field, California, USA., Gibbons SM; Institute for Systems Biology, Seattle, Washington, USA.; Department of Bioengineering, University of Washington, Seattle, Washington, USA., Hays D; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Hervey J; Center for Bio/Molecular Science & Engineering, Naval Research Laboratory, Washington, DC, USA., Hu B; Los Alamos National Laboratory, Los Alamos, New Mexico, USA., Hurwitz BL; Biosystems Engineering Department, University of Arizona, Tucson, Arizona, USA., Jaiswal P; Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, USA., Joachimiak MP; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Kinkel L; Department of Plant Pathology, University of Minnesota, St. Paul, Minnesota, USA., Ladau J; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Martin SL; Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA., McCue LA; Pacific Northwest National Laboratory, Richland, Washington, USA., Miller K; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Mouncey N; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Mungall C; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Pafilis E; Institute of Marine Biology Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Heraklion, Crete, Greece., Reddy TBK; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Richardson L; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Roux S; Department of Energy Joint Genome Institute, Berkeley, California, USA., Schriml LM; University of Maryland School of Medicine, Institute for Genome Sciences, Baltimore, Maryland, USA, Shaffer JP; Department of Pediatrics, School of Medicine, University of California, San Diego, California, USA., Sundaramurthi JC; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Thompson LR; Northern Gulf Institute, Mississippi State University, Mississippi State, Mississippi, USA.; Ocean Chemistry and Ecosystems Division, Atlantic Oceanographic and Meteorological Laboratory, National Oceanic and Atmospheric Administration, Miami, Florida, USA., Timme RE; US Food and Drug Administration, Center for Food Safety and Applied Nutrition, College Park, Maryland, USA., Zheng J; Department of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA., Wood-Charlson EM; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Eloe-Fadrosh EA; Lawrence Berkeley National Laboratory, Berkeley, California, USA eaeloefadrosh@lbl.gov.

Publikováno v: MSystems [mSystems] 2021 Feb 23; Vol. 6 (1). Date of Electronic Publication: 2021 Feb 23.

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