Whole-genome sequencing coupled to imputation discovers genetic signals for anthropometric traits

Autor: Graham R. S. Ritchie, Massimiliano Cocca, Anette Varbo, Nicholas J. Timpson, George Dedoussis, Michael Boehnke, Marjolein N. Kooijman, Beate St Pourcain, Yasin Memari, André G. Uitterlinden, Andrew A Crawford, Eleftheria Zeggini, Fernando Rivadeneira, Satu Männistö, Caroline L Relton, Yali Xue, Petr Danecek, Kalliope Panoutsopoulou, Albert Hofman, George Davey Smith, María Soler Artigas, Michela Traglia, Josine L. Min, Weihua Zhang, Janine F. Felix, Christopher J Hammond, Claudia Langenberg, Jie Huang, Brian R. Walker, Narinder Bansal, Nigel W. Rayner, Emanuele Di Angelantonio, Kerrin S. Small, Konstantinos Hatzikotoulas, Cecilia M. Lindgren, Alisa K. Manning, Shane A. McCarthy, Susan M. Ring, Marcus E. Kleber, Abhishek Nag, Oliver Stegle, Paul Burton, Oscar H. Franco, William R. Scott, Carolina Medina-Gomez, Valentina Iotchkova, John R. B. Perry, Alireza Moayyeri, Lavinia Paternoster, Marianne Benn, Markus Perola, Katerina Trajanoska, Inês Barroso, Audrey E. Hendricks, Cinzia Sala, Carlo Sidore, Celia M. T. Greenwood, Jeremy Schwartzentruber, Richard Durbin, Cristina Bombieri, Klaudia Walter, Wei-Yu Lin, Hashem A. Shihab, Gialuigi Zaza, Jaspal S. Kooner, Magdalena Zoledziewska, Angela Matchan, Adam S. Butterworth, Pekka Jousilahti, Julia Steinberg, Anne Tybjærg-Hansen, John P. Kemp, Daniel Suveges, Nicole Soranzo, Chris Finan, Veikko Salomaa, Ioanna Ntalla, Nicholas J. Wareham, Adam E. Locke, Vincent W. V. Jaddoe, Ioanna Tachmazidou, Daniela Toniolo, Scott Wilson, Antonella Mulas, Aliki-Eleni Farmaki, Lorraine Southam, Martin D. Tobin, Tom R. Gaunt, Zhongsheng Chen, Paolo Gasparini, Andrew P. Morris, Giovanni Gambaro, John C. Chambers, Børge G. Nordestgaard, Sarah Metrustry, Benjamin Lehne, Jian'an Luan, Giovanni Malerba, Robert A. Scott, Mark I. McCarthy, Michal Szpak, Francesco Cucca, Tim D. Spector

Publikováno v: American Journal of Human Genetics, 100(6), 865-884. Cell Press
Tachmazidou, I, Süveges, D, Min, J L, Ritchie, G R S, Steinberg, J, Walter, K, Iotchkova, V, Schwartzentruber, J, Huang, J, Memari, Y, McCarthy, S, Crawford, A A, Bombieri, C, Cocca, M, Farmaki, A-E, Gaunt, T R, Jousilahti, P, Kooijman, M N, Lehne, B, Malerba, G, Männistö, S, Matchan, A, Medina-Gomez, C, Metrustry, S J, Nag, A, Ntalla, I, Paternoster, L, Rayner, N W, Sala, C, Scott, W R, Shihab, H A, Southam, L, St Pourcain, B, Traglia, M, Trajanoska, K, Zaza, G, Zhang, W, Artigas, M S, Bansal, N, Benn, M, Chen, Z, Danecek, P, Lin, W-Y, Locke, A, Luan, J, Manning, A K, Mulas, A, Sidore, C, Tybjaerg-Hansen, A, Varbo, A, Zoledziewska, M, Finan, C, Hatzikotoulas, K, Hendricks, A E, Kemp, J P, Moayyeri, A, Panoutsopoulou, K, Szpak, M, Wilson, S G, Boehnke, M, Cucca, F, Di Angelantonio, E, Langenberg, C, Lindgren, C, McCarthy, M I, Morris, A P, Nordestgaard, B G, Scott, R A, Tobin, M D, Wareham, N J, Burton, P, Chambers, J C, Smith, G D, Dedoussis, G, Felix, J F, Franco, O H, Gambaro, G, Gasparini, P, Hammond, C J, Hofman, A, Jaddoe, V W V, Kleber, M, Kooner, J S, Perola, M, Relton, C, Ring, S M, Rivadeneira, F, Salomaa, V, Spector, T D, Stegle, O, Toniolo, D, Uitterlinden, A G, Barroso, I, Greenwood, C M T, Perry, J R B, Walker, B R, Butterworth, A S, Xue, Y, Durbin, R, Small, K S, Soranzo, N, Timpson, N J, Zeggini, E & Bansal, N 2017, ' Whole-Genome Sequencing Coupled to Imputation Discovers Genetic Signals for Anthropometric Traits ', American Journal of Human Genetics, vol. 100, no. 6, pp. 865-884 . https://doi.org/10.1016/j.ajhg.2017.04.014
The American Journal of Human Genetics
Tachmazidou, I, Süveges, D, Min, J L, Ritchie, G R S, Steinberg, J, Walter, K, Iotchkova, V, Schwartzentruber, J, Huang, J, Memari, Y, McCarthy, S, Crawford, A J, Bombieri, C, Cocca, M, Farmaki, A-E, Gaunt, T R, Jousilahti, P, Kooijman, M N, Lehne, B, Malerba, G, Männistö, S, Matchan, A, Medina-Gomez, C, Metrustry, S J, Nag, A, Ntalla, I, Paternoster, L, Rayner, N W, Sala, C, Scott, W R, Shihab, H A, Southam, L, St Pourcain, B, Traglia, M, Trajanoska, K, Zaza, G, Zhang, W, Artigas, M S, Bansal, N, Benn, M, Chen, Z, Danecek, P, Lin, W-Y, Locke, A E, Luan, J, Manning, A K, Mulas, A, Sidore, C, Tybjaerg-Hansen, A, Nordestgaard, B G & SpiroMeta Consortium 2017, ' Whole-Genome Sequencing Coupled to Imputation Discovers Genetic Signals for Anthropometric Traits ', American Journal of Human Genetics, vol. 100, no. 6, pp. 865-884 . https://doi.org/10.1016/j.ajhg.2017.04.014
AMERICAN JOURNAL OF HUMAN GENETICS
Tachmazidou, I, Süveges, D, Min, J L, Ritchie, G R S, Steinberg, J, Walter, K, Iotchkova, V, Schwartzentruber, J, Huang, J, Memari, Y, Mccarthy, S, Crawford, A A, Bombieri, C, Cocca, M, Farmaki, A, Gaunt, T R, Jousilahti, P, Kooijman, M N, Lehne, B, Malerba, G, Männistö, S, Matchan, A, Medina-gomez, C, Metrustry, S J, Nag, A, Ntalla, I, Paternoster, L, Rayner, N W, Sala, C, Scott, W R, Shihab, H A, Southam, L, St Pourcain, B, Traglia, M, Trajanoska, K, Zaza, G, Zhang, W, Artigas, M S, Bansal, N, Benn, M, Chen, Z, Danecek, P, Lin, W, Locke, A, Luan, J, Manning, A K, Mulas, A, Sidore, C, Tybjaerg-hansen, A, Varbo, A, Zoledziewska, M, Finan, C, Hatzikotoulas, K, Hendricks, A E, Kemp, J P, Moayyeri, A, Panoutsopoulou, K, Szpak, M, Wilson, S G, Boehnke, M, Cucca, F, Di Angelantonio, E, Langenberg, C, Lindgren, C, Mccarthy, M I, Morris, A P, Nordestgaard, B G, Scott, R A, Tobin, M D, Wareham, N J, Burton, P, Chambers, J C, Smith, G D, Dedoussis, G, Felix, J F, Franco, O H, Gambaro, G, Gasparini, P, Hammond, C J, Hofman, A, Jaddoe, V W V, Kleber, M, Kooner, J S, Perola, M, Relton, C, Ring, S M, Rivadeneira, F, Salomaa, V, Spector, T D, Stegle, O, Toniolo, D, Uitterlinden, A G, Barroso, I, Greenwood, C M T, Perry, J R B, Walker, B R, Butterworth, A S, Xue, Y, Durbin, R, Small, K S, Soranzo, N, Timpson, N J & Zeggini, E 2017, ' Whole-Genome Sequencing Coupled to Imputation Discovers Genetic Signals for Anthropometric Traits ', American Journal of Human Genetics, vol. 100, no. 6, pp. 865-884 . https://doi.org/10.1016/j.ajhg.2017.04.014
Tachmazidou, I, Süveges, D, Min, J L, Ritchie, G R S, Steinberg, J, Walter, K, Iotchkova, V, Schwartzentruber, J, Huang, J, Memari, Y, McCarthy, S, Crawford, A A, Bombieri, C, Cocca, M, Farmaki, A-E, Gaunt, T R, Jousilahti, P, Kooijman, M N, Lehne, B, Malerba, G, Männistö, S, Matchan, A, Medina-Gomez, C, Metrustry, S J, Nag, A, Ntalla, I, Paternoster, L, Rayner, N W, Sala, C, Scott, W R, Shihab, H A, Southam, L, St Pourcain, B, Traglia, M, Trajanoska, K, Zaza, G, Zhang, W, Artigas, M S, Bansal, N, Benn, M, Chen, Z, Danecek, P, Lin, W-Y, Locke, A, Luan, J, Manning, A K, Mulas, A, Sidore, C, Tybjaerg-Hansen, A, Varbo, A, Zoledziewska, M, Finan, C, Hatzikotoulas, K, Hendricks, A E, Kemp, J P, Moayyeri, A, Panoutsopoulou, K, Szpak, M, Wilson, S G, Boehnke, M, Cucca, F, Di Angelantonio, E, Langenberg, C, Lindgren, C, McCarthy, M I, Morris, A P, Nordestgaard, B G, Scott, R A, Tobin, M D, Wareham, N J, Burton, P, Chambers, J C, Smith, G D, Dedoussis, G, Felix, J F, Franco, O H, Gambaro, G, Gasparini, P, Hammond, C J, Hofman, A, Jaddoe, V W V, Kleber, M, Kooner, J S, Perola, M, Relton, C, Ring, S M, Rivadeneira, F, Salomaa, V, Spector, T D, Stegle, O, Toniolo, D, Uitterlinden, A G, Barroso, I, Greenwood, C M T, Perry, J R B, Walker, B R, Butterworth, A S, Xue, Y, Durbin, R, Small, K S, Soranzo, N, Timpson, N J & Zeggini, E 2017, ' Whole-Genome Sequencing Coupled to Imputation Discovers Genetic Signals for Anthropometric Traits ', American Journal of Human Genetics, vol. 100, no. 6, pp. 865–884 . https://doi.org/10.1016/j.ajhg.2017.04.014

Deep sequence-based imputation can enhance the discovery power of genome-wide association studies by assessing previously unexplored variation across the common- and low-frequency spectra. We applied a hybrid whole genome sequencing (WGS) and deep im

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::204f2ad0000de30434091d05a9fc3854
http://hdl.handle.net/11562/965145