Biogeographical survey of soil microbiomes across sub-Saharan Africa: structure, drivers, and predicted climate-driven changes

Autor: DA Cowan, PH Lebre, CER Amon, RW Becker, HI Boga, A Boulangé, TL Chiyaka, T Coetzee, PC de Jager, O Dikinya, F Eckardt, M Greve, MA Harris, DW Hopkins, HB Houngnandan, P Houngnandan, K Jordaan, E Kaimoyo, AK Kambura, G Kamgan-Nkuekam, TP Makhalanyane, G Maggs-Kölling, E Marais, H Mondlane, E Nghalipo, BW Olivier, M Ortiz, LR Pertierra, J-B Ramond, M Seely, I Sithole-Niang, A Valverde, G Varliero, S Vikram, DH Wall, A Zeze

Publikováno v: Microbiome, Vol 10, Iss 1, Pp 1-22 (2022)

Abstract Background Top-soil microbiomes make a vital contribution to the Earth’s ecology and harbor an extraordinarily high biodiversity. They are also key players in many ecosystem services, particularly in arid regions of the globe such as the A

Externí odkaz: https://doaj.org/article/d479c54724ed4e1480ae424f343b05c0

'Follow the Water': Microbial Water Acquisition in Desert Soils.

Autor: Cowan DA; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria 0002, South Africa., Cary SC; School of Biological Sciences, University of Waikato, Hamilton 3216, New Zealand., DiRuggiero J; Departments of Biology, Johns Hopkins University, Baltimore, MD 21218, USA.; Departments of Earth and Planetary Sciences, Johns Hopkins University, Baltimore, MD 21218, USA., Eckardt F; Department of Environmental and Geographical Science, University of Cape Town, Cape Town 7701, South Africa., Ferrari B; School of Biotechnology and Biological Sciences, University of New South Wales, Sydney, NSW 2052, Australia., Hopkins DW; Scotland's Rural College, West Mains Road, Edinburgh EH9 3JG, UK., Lebre PH; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria 0002, South Africa., Maggs-Kölling G; Gobabeb-Namib Research Institute, Walvis Bay 13013, Namibia., Pointing SB; Department of Biological Sciences, National University of Singapore, Singapore 117558, Singapore., Ramond JB; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria 0002, South Africa.; Departamento Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Santiago 7820436, Chile., Tribbia D; School of Biotechnology and Biological Sciences, University of New South Wales, Sydney, NSW 2052, Australia., Warren-Rhodes K; NASA Ames Research Center, Moffett Field, CA 94035, USA.

Publikováno v: Microorganisms [Microorganisms] 2023 Jun 27; Vol. 11 (7). Date of Electronic Publication: 2023 Jun 27.

Biogeographical survey of soil microbiomes across sub-Saharan Africa: structure, drivers, and predicted climate-driven changes.

Autor: Cowan DA; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa. don.cowan@up.ac.za., Lebre PH; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa. pedro.bixiraonetomarinholebre@up.ac.za., Amon C; Institut National Polytechnique Houphouet-Boigny, Cote d'Ivoire, Yamoussoukro, South Africa., Becker RW; Biodiversity Research Centre, Department of Agriculture and Natural Resources Sciences, Namibia University of Science and Technology, Windhoek, Namibia., Boga HI; Taita Taveta University, Voi, Kenya., Boulangé A; Centro de Biotecnologia, Universidade Eduardo Mondlane, Maputo, Mozambique.; UMR InterTryp, CIRAD-IRD, 34398, Montpellier, France., Chiyaka TL; Department of Biotechnology and Biochemistry, University of Zimbabwe, Harare, Zimbabwe., Coetzee T; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., de Jager PC; Department of Plant and Soil Sciences, University of Pretoria, Pretoria, South Africa., Dikinya O; Department of Environmental Science, University of Botswana, Gaborone, Botswana., Eckardt F; Department of Geography, University of Cape Town, Cape Town, South Africa., Greve M; Department of Plant and Soil Sciences, University of Pretoria, Pretoria, South Africa., Harris MA; Department of Plant and Soil Sciences, University of Pretoria, Pretoria, South Africa., Hopkins DW; Scotland's Rural College, Edinburgh, EH9 3JG, UK., Houngnandan HB; Université Nationale d'Agriculture, Porto-Novo, Benin (Laboratoire de Microbiologie Des Sols Et d'Ecologie Microbienne), Porto-Novo, Benin., Houngnandan P; Université Nationale d'Agriculture, Porto-Novo, Benin (Laboratoire de Microbiologie Des Sols Et d'Ecologie Microbienne), Porto-Novo, Benin., Jordaan K; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa.; Departamento de Genética Molecular Y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile., Kaimoyo E; University of Zambia, Lusaka, Zambia., Kambura AK; Taita Taveta University, Voi, Kenya., Kamgan-Nkuekam G; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., Makhalanyane TP; Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., Maggs-Kölling G; Gobabeb-Namib Research Institute, Walvis Bay, Namibia., Marais E; Gobabeb-Namib Research Institute, Walvis Bay, Namibia., Mondlane H; Centro de Biotecnologia, Universidade Eduardo Mondlane, Maputo, Mozambique., Nghalipo E; Biodiversity Research Centre, Department of Agriculture and Natural Resources Sciences, Namibia University of Science and Technology, Windhoek, Namibia., Olivier BW; Department of Plant and Soil Sciences, University of Pretoria, Pretoria, South Africa., Ortiz M; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa.; Department of Biological Sciences, Clemson University, Clemson, SC, USA., Pertierra LR; Department of Plant and Soil Sciences, University of Pretoria, Pretoria, South Africa., Ramond JB; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa.; Departamento de Genética Molecular Y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile., Seely M; Gobabeb-Namib Research Institute, Walvis Bay, Namibia., Sithole-Niang I; Department of Biotechnology and Biochemistry, University of Zimbabwe, Harare, Zimbabwe., Valverde A; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., Varliero G; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., Vikram S; Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa., Wall DH; Department of Biology, Colorado State University, Fort Collins, USA., Zeze A; Institut National Polytechnique Houphouet-Boigny, Cote d'Ivoire, Yamoussoukro, South Africa.

Publikováno v: Microbiome [Microbiome] 2022 Aug 23; Vol. 10 (1), pp. 131. Date of Electronic Publication: 2022 Aug 23.

Inhibitory effects of climate change on the growth and extracellular enzyme activities of a widespread Antarctic soil fungus.

Autor: Misiak M; British Antarctic Survey, NERC, Cambridge, UK.; Cardiff School of Biosciences, Cardiff, UK., Goodall-Copestake WP; British Antarctic Survey, NERC, Cambridge, UK., Sparks TH; Institute of Zoology, Poznań University of Life Sciences, Poznań, Poland.; Museum of Zoology, University of Cambridge, Cambridge, UK., Worland MR; British Antarctic Survey, NERC, Cambridge, UK., Boddy L; Cardiff School of Biosciences, Cardiff, UK., Magan N; Applied Mycology Group, Environment and AgriFood Theme, Cranfield University, Cranfield, UK., Convey P; British Antarctic Survey, NERC, Cambridge, UK., Hopkins DW; Scotland's Rural College, Edinburgh, UK., Newsham KK; British Antarctic Survey, NERC, Cambridge, UK.

Publikováno v: Global change biology [Glob Chang Biol] 2020 Nov 24. Date of Electronic Publication: 2020 Nov 24.

Angiosperm symbioses with non-mycorrhizal fungal partners enhance N acquisition from ancient organic matter in a warming maritime Antarctic.

Autor: Hill PW; School of Natural Sciences, Bangor University, Bangor, LL57 2UW, UK., Broughton R; British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, CB3 OET, UK.; Institute of Aquaculture, University of Stirling, Stirling, UK., Bougoure J; Faculty of Science, SoilsWest, UWA School of Agriculture and Environment, University of Western Australia, Crawley, WA, 6009, Australia.; Centre for Microscopy, Characterisation and Analysis, University of Western Australia, Crawley, WA, 6009, Australia., Havelange W; School of Natural Sciences, Bangor University, Bangor, LL57 2UW, UK., Newsham KK; British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, CB3 OET, UK., Grant H; Life Sciences Mass Spectrometry Facility, Lancaster Environment Centre, Lancaster, LA1 4AP, UK., Murphy DV; Faculty of Science, SoilsWest, UWA School of Agriculture and Environment, University of Western Australia, Crawley, WA, 6009, Australia., Clode P; Centre for Microscopy, Characterisation and Analysis, University of Western Australia, Crawley, WA, 6009, Australia.; UWA School of Biological Sciences, University of Western Australia, Crawley, WA, 6009, Australia., Ramayah S; School of Natural Sciences, Bangor University, Bangor, LL57 2UW, UK., Marsden KA; School of Natural Sciences, Bangor University, Bangor, LL57 2UW, UK.; Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, Vic., 3010, Australia., Quilliam RS; School of Natural Sciences, Bangor University, Bangor, LL57 2UW, UK.; Biological and Environmental Sciences, Faculty of Natural Sciences, University of Stirling, Stirling, FK9 4LA, UK., Roberts P; School of Natural Sciences, Bangor University, Bangor, LL57 2UW, UK., Brown C; School of Natural Sciences, Bangor University, Bangor, LL57 2UW, UK., Read DJ; Animal and Plant Sciences, University of Sheffield, Western bank, Sheffield, S10 2TN, UK., Deluca TH; School of Natural Sciences, Bangor University, Bangor, LL57 2UW, UK.; WA Franke College of Forestry and Conservation, University of Montana, Missoula, MT, 59812, USA., Bardgett RD; School of Earth and Environmental Sciences, University of Manchester, Manchester, M13 9PL, UK., Hopkins DW; SRUC - Scotland's Rural College, West Mains Road, Edinburgh, EH9 3JG, UK., Jones DL; School of Natural Sciences, Bangor University, Bangor, LL57 2UW, UK.; Faculty of Science, SoilsWest, UWA School of Agriculture and Environment, University of Western Australia, Crawley, WA, 6009, Australia.

Publikováno v: Ecology letters [Ecol Lett] 2019 Dec; Vol. 22 (12), pp. 2111-2119. Date of Electronic Publication: 2019 Oct 17.