Zobrazeno 1 - 10 of 66 pro vyhledávání: '"DS Read"'
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Evaluation of metagenomic, 16S rRNA gene and ultra-plexed PCR-based sequencing approaches for profiling antimicrobial resistance gene and bacterial taxonomic composition of polymicrobial samples
Autor: KK Chau, W Matlock, B Constantinides, S Lipworth, L Newbold, H Tipper, T Goodall, H Brett, J Hughes, DW Crook, DW Eyre, DS Read, AS Walker, N Stoesser
BackgroundShotgun metagenomic sequencing is increasingly popular in taxonomic and resistome-profiling of polymicrobial samples due to its agnostic nature and data versatility. However, caveats include high- cost, sequencing depth/sensitivity trade-of
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::e4792abe89764a28829421521e6ff602
https://doi.org/10.1101/2022.05.12.491637
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2
Akademický článek
Dissemination and persistence of antimicrobial resistance (AMR) along the wastewater-river continuum.
Autor: Read DS; UK Centre for Ecology & Hydrology (UKCEH), Benson Lane, Crowmarsh Gifford, Wallingford OX10 8BB, UK. Electronic address: daniel.read@ceh.ac.uk., Gweon HS; UK Centre for Ecology & Hydrology (UKCEH), Benson Lane, Crowmarsh Gifford, Wallingford OX10 8BB, UK; School of Biological Sciences, University of Reading, Reading, UK., Bowes MJ; UK Centre for Ecology & Hydrology (UKCEH), Benson Lane, Crowmarsh Gifford, Wallingford OX10 8BB, UK., Anjum MF; Department of Bacteriology, Animal and Plant Health Agency, Addlestone, Surrey KT15 3NB, UK., Crook DW; Nuffield Department of Medicine, University of Oxford, Oxford, UK., Chau KK; Nuffield Department of Medicine, University of Oxford, Oxford, UK., Shaw LP; Nuffield Department of Medicine, University of Oxford, Oxford, UK; Department of Biology, University of Oxford, 11a Mansfield Road, Oxford OX1 3SZ, UK., Hubbard A; Nuffield Department of Medicine, University of Oxford, Oxford, UK; Department of Biosciences, Nottingham Trent University, Nottingham NG11 8NS, UK., AbuOun M; Department of Bacteriology, Animal and Plant Health Agency, Addlestone, Surrey KT15 3NB, UK., Tipper HJ; UK Centre for Ecology & Hydrology (UKCEH), Benson Lane, Crowmarsh Gifford, Wallingford OX10 8BB, UK., Hoosdally SJ; Nuffield Department of Medicine, University of Oxford, Oxford, UK., Bailey MJ; UK Centre for Ecology & Hydrology (UKCEH), Benson Lane, Crowmarsh Gifford, Wallingford OX10 8BB, UK., Walker AS; Nuffield Department of Medicine, University of Oxford, Oxford, UK., Stoesser N; Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Publikováno v: Water research [Water Res] 2024 Oct 15; Vol. 264, pp. 122204. Date of Electronic Publication: 2024 Aug 03.
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3
Akademický článek
Presence of emerging organic contaminants and microbial indicators in surface water and groundwater in urban India.
Autor: Brauns B; British Geological Survey (BGS), Environmental Science Centre, Keyworth, Nottingham, NG12 5GG, UK. Electronic address: benaun@bgs.ac.uk., Chandra S; Department of Mines and Geology, Government of Karnataka, Karnataka, 562159, India., Civil W; National Laboratory Service, Starcross, Exeter, EX6 8DF, UK., Lapworth DJ; British Geological Survey (BGS), Maclean Building, Crowmarsh Gifford, Wallingford, OX10 8BB, UK., MacDonald AM; British Geological Survey (BGS), The Lyell Centre, Edinburgh, EH14 4AP, UK., McKenzie AA; British Geological Survey (BGS), Maclean Building, Crowmarsh Gifford, Wallingford, OX10 8BB, UK., Read DS; UK Centre of Ecology and Hydrology (UKCEH), Maclean Building, Crowmarsh Gifford, Wallingford, OX10 8BB, UK., Sekhar M; Department of Civil Engineering, Indian Institute of Science (IISc), Bengaluru, Karnataka, 560012, India., Singer AC; UK Centre of Ecology and Hydrology (UKCEH), Maclean Building, Crowmarsh Gifford, Wallingford, OX10 8BB, UK., Thankachan A; University of Visvesvaraya College of Engineering, Bangalore University, Bengaluru, Karnataka, 560001, India., Tipper HJ; UK Centre of Ecology and Hydrology (UKCEH), Maclean Building, Crowmarsh Gifford, Wallingford, OX10 8BB, UK.
Publikováno v: Environmental pollution (Barking, Essex : 1987) [Environ Pollut] 2024 Sep 16; Vol. 362, pp. 124983. Date of Electronic Publication: 2024 Sep 16.
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4
Akademický článek
Do storm overflows influence AMR in the environment and is this relevant to human health? A UK perspective on a global issue.
Autor: Tipper HJ; UK Centre for Ecology & Hydrology, Wallingford OX10 8BB, England. Electronic address: holtip@ceh.ac.uk., Stanton IC; UK Centre for Ecology & Hydrology, Wallingford OX10 8BB, England., Payne RA; UK Centre for Ecology & Hydrology, Wallingford OX10 8BB, England., Read DS; UK Centre for Ecology & Hydrology, Wallingford OX10 8BB, England., Singer AC; UK Centre for Ecology & Hydrology, Wallingford OX10 8BB, England.
Publikováno v: Water research [Water Res] 2024 Aug 15; Vol. 260, pp. 121952. Date of Electronic Publication: 2024 Jun 16.
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5
Akademický článek
Temporal drivers of tryptophan-like fluorescent dissolved organic matter along a river continuum.
Autor: Harris NA; British Geological Survey, Maclean Building, Wallingford OX10 8BB, UK. Electronic address: nhar1@bgs.ac.uk., Sorensen JPR; British Geological Survey, Maclean Building, Wallingford OX10 8BB, UK., Marchant B; British Geological Survey, Maclean Building, Wallingford OX10 8BB, UK., Old GH; Centre for Ecology & Hydrology, Benson Lane, Crowmarsh Gifford, Wallingford, Oxfordshire OX10 8BB, UK., Naden PS; Centre for Ecology & Hydrology, Benson Lane, Crowmarsh Gifford, Wallingford, Oxfordshire OX10 8BB, UK., Bowes MJ; Centre for Ecology & Hydrology, Benson Lane, Crowmarsh Gifford, Wallingford, Oxfordshire OX10 8BB, UK., Scarlett PM; Centre for Ecology & Hydrology, Benson Lane, Crowmarsh Gifford, Wallingford, Oxfordshire OX10 8BB, UK., Nicholls DJE; Centre for Ecology & Hydrology, Benson Lane, Crowmarsh Gifford, Wallingford, Oxfordshire OX10 8BB, UK., Armstrong LK; Centre for Ecology & Hydrology, Benson Lane, Crowmarsh Gifford, Wallingford, Oxfordshire OX10 8BB, UK., Wickham HD; Centre for Ecology & Hydrology, Benson Lane, Crowmarsh Gifford, Wallingford, Oxfordshire OX10 8BB, UK., Read DS; Centre for Ecology & Hydrology, Benson Lane, Crowmarsh Gifford, Wallingford, Oxfordshire OX10 8BB, UK., Lapworth D; British Geological Survey, Maclean Building, Wallingford OX10 8BB, UK., Bond T; Centre for Environmental Health and Engineering, Department of Civil and Environmental Engineering, University of Surrey, Guildford GU2 5XH, UK., Pond K; Centre for Environmental Health and Engineering, Department of Civil and Environmental Engineering, University of Surrey, Guildford GU2 5XH, UK.
Publikováno v: The Science of the total environment [Sci Total Environ] 2024 Jun 10; Vol. 928, pp. 172285. Date of Electronic Publication: 2024 Apr 08.
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6
Akademický článek
Fate and behaviour of Microplastics (> 25µm) within the water distribution network, from water treatment works to service reservoirs and customer taps.
Autor: Adediran GA; UK Centre for Ecology & Hydrology, Wallingford, Oxfordshire OX10 8BB, UK. Electronic address: gboade@ceh.ac.uk., Cox R; UK Centre for Ecology & Hydrology, Wallingford, Oxfordshire OX10 8BB, UK., Jürgens MD; UK Centre for Ecology & Hydrology, Wallingford, Oxfordshire OX10 8BB, UK., Morel E; UK Centre for Ecology & Hydrology, Wallingford, Oxfordshire OX10 8BB, UK., Cross R; UK Centre for Ecology & Hydrology, Wallingford, Oxfordshire OX10 8BB, UK., Carter H; UK Centre for Ecology & Hydrology, Lancaster Environment Centre, Library Avenue, Bailrigg, Lancaster LA1 4AP, UK., Pereira MG; UK Centre for Ecology & Hydrology, Lancaster Environment Centre, Library Avenue, Bailrigg, Lancaster LA1 4AP, UK., Read DS; UK Centre for Ecology & Hydrology, Wallingford, Oxfordshire OX10 8BB, UK., Johnson AC; UK Centre for Ecology & Hydrology, Wallingford, Oxfordshire OX10 8BB, UK.
Publikováno v: Water research [Water Res] 2024 May 15; Vol. 255, pp. 121508. Date of Electronic Publication: 2024 Mar 23.
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7
Akademický článek
Maximising environmental pressure-response relationship signals from diatom-based metabarcoding in rivers.
Autor: Kelly MG; Bowburn Consultancy, 11 Monteigne Drive, Bowburn, Durham DH6 5QB, UK; School of Geography, Nottingham University, Nottingham NG7 2RD, UK. Electronic address: MGKelly@bowburn-consultancy.co.uk., Mann DG; Royal Botanic Garden Edinburgh, Edinburgh EH3 5LR, Scotland, UK; Marine and Continental Waters, Institute for Food and Agricultural Research and Technology (IRTA), Crta de Poble Nou Km 5.5, E-43540 La Ràpita, Catalunya, Spain., Taylor JD; UK Centre for Ecology & Hydrology (UKCEH), Wallingford, Oxfordshire OX10 8BB, UK., Juggins S; School of Geography, Politics and Sociology, Newcastle University, Newcastle upon Tyne NE1 7RU, UK., Walsh K; Chief Scientist's Group, Environment Agency, Deanery Road, Bristol BS1 5AH, UK., Pitt JA; Chief Scientist's Group, Environment Agency, Deanery Road, Bristol BS1 5AH, UK., Read DS; UK Centre for Ecology & Hydrology (UKCEH), Wallingford, Oxfordshire OX10 8BB, UK.
Publikováno v: The Science of the total environment [Sci Total Environ] 2024 Mar 01; Vol. 914, pp. 169445. Date of Electronic Publication: 2023 Dec 28.
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8
Akademický článek
Evaluating the use of lake sedimentary DNA in palaeolimnology: A comparison with long-term microscopy-based monitoring of the phytoplankton community.
Autor: Thorpe AC; UK Centre for Ecology & Hydrology (UKCEH), Wallingford, UK.; School of Geography, Earth and Environmental Sciences, University of Birmingham, Birmingham, UK., Mackay EB; UK Centre for Ecology & Hydrology (UKCEH), Lancaster, UK., Goodall T; UK Centre for Ecology & Hydrology (UKCEH), Wallingford, UK., Bendle JA; School of Geography, Earth and Environmental Sciences, University of Birmingham, Birmingham, UK., Thackeray SJ; UK Centre for Ecology & Hydrology (UKCEH), Lancaster, UK., Maberly SC; UK Centre for Ecology & Hydrology (UKCEH), Lancaster, UK., Read DS; UK Centre for Ecology & Hydrology (UKCEH), Wallingford, UK.
Publikováno v: Molecular ecology resources [Mol Ecol Resour] 2024 Feb; Vol. 24 (2), pp. e13903. Date of Electronic Publication: 2023 Nov 23.
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9
Akademický článek
Water-soluble polymers: Emerging contaminants detected, separated and quantified by a novel GPC/MALDI-TOF method.
Autor: Tarring EC; School of Chemistry, Cardiff University, Cardiff, United Kingdom., Durance I; School of Biosciences, Cardiff University, Cardiff, United Kingdom., Harbottle MJ; School of Engineering, Cardiff University, Cardiff, United Kingdom., Lucas R; Haleon R&D, Weybridge, United Kingdom., Read DS; UK Centre for Ecology and Hydrology, Wallingford, United Kingdom., Ward BD; School of Chemistry, Cardiff University, Cardiff, United Kingdom. Electronic address: WardBD@Cardiff.ac.uk.
Publikováno v: Environmental pollution (Barking, Essex : 1987) [Environ Pollut] 2024 Jan 01; Vol. 340 (Pt 1), pp. 122888. Date of Electronic Publication: 2023 Nov 06.
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10
Akademický článek
High-resolution characterization of short-term temporal variability in the taxonomic and resistome composition of wastewater influent.
Autor: Chau KK; Nuffield Department of Medicine, University of Oxford, John Radcliffe Hospital, Headley Way, Headington, Oxford, OX3 9DU, UK.; NIHR Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, University of Oxford in partnership with Public Health England, Oxford, UK., Goodall T; UK Centre for Ecology & Hydrology, MacLean Bldg, Benson Ln, Crowmarsh Gifford, Wallingford, OX10 8BB, UK., Bowes M; UK Centre for Ecology & Hydrology, MacLean Bldg, Benson Ln, Crowmarsh Gifford, Wallingford, OX10 8BB, UK., Easterbrook K; Thames Water, Clearwater Court, Vastern Road, Reading, RG1 8DB, UK., Brett H; Thames Water, Clearwater Court, Vastern Road, Reading, RG1 8DB, UK., Hughes J; Thames Water, Clearwater Court, Vastern Road, Reading, RG1 8DB, UK., Crook DW; Nuffield Department of Medicine, University of Oxford, John Radcliffe Hospital, Headley Way, Headington, Oxford, OX3 9DU, UK.; NIHR Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, University of Oxford in partnership with Public Health England, Oxford, UK.; Department of Microbiology/Infectious diseases, Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Headley Way, Headington, Oxford, OX3 9DU, UK.; NIHR Oxford Biomedical Research Centre, The Joint Research Office, Second Floor, OUH Cowley, Unipart House Business Centre, Garsington Road, Oxford, OX4 2PG, UK., Read DS; UK Centre for Ecology & Hydrology, MacLean Bldg, Benson Ln, Crowmarsh Gifford, Wallingford, OX10 8BB, UK., Walker AS; Nuffield Department of Medicine, University of Oxford, John Radcliffe Hospital, Headley Way, Headington, Oxford, OX3 9DU, UK.; NIHR Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, University of Oxford in partnership with Public Health England, Oxford, UK.; NIHR Oxford Biomedical Research Centre, The Joint Research Office, Second Floor, OUH Cowley, Unipart House Business Centre, Garsington Road, Oxford, OX4 2PG, UK., Stoesser N; Nuffield Department of Medicine, University of Oxford, John Radcliffe Hospital, Headley Way, Headington, Oxford, OX3 9DU, UK.; NIHR Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, University of Oxford in partnership with Public Health England, Oxford, UK.; Department of Microbiology/Infectious diseases, Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Headley Way, Headington, Oxford, OX3 9DU, UK.; NIHR Oxford Biomedical Research Centre, The Joint Research Office, Second Floor, OUH Cowley, Unipart House Business Centre, Garsington Road, Oxford, OX4 2PG, UK.
Publikováno v: Microbial genomics [Microb Genom] 2023 May; Vol. 9 (5).
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