Zobrazeno 1 - 10
of 257
pro vyhledávání: '"DOTY, DAVID"'
Autor:
Doty, David, Heckmann, Ben
Chemical reaction networks (CRNs) model systems where molecules interact according to a finite set of reactions such as $A + B \to C$, representing that if a molecule of $A$ and $B$ collide, they disappear and a molecule of $C$ is produced. CRNs can
Externí odkaz:
http://arxiv.org/abs/2405.08649
Autor:
Calabrese, Kim, Doty, David
We study the model of continuous chemical reaction networks (CRNs), consisting of reactions such as $A+B \to C+D$ that can transform some continuous, nonnegative real-valued quantity (called a *concentration*) of chemical species $A$ and $B$ into equ
Externí odkaz:
http://arxiv.org/abs/2403.07099
Autor:
Wolpert, David, Korbel, Jan, Lynn, Christopher, Tasnim, Farita, Grochow, Joshua, Kardeş, Gülce, Aimone, James, Balasubramanian, Vijay, de Giuli, Eric, Doty, David, Freitas, Nahuel, Marsili, Matteo, Ouldridge, Thomas E., Richa, Andrea, Riechers, Paul, Roldán, Édgar, Rubenstein, Brenda, Toroczkai, Zoltan, Paradiso, Joseph
Publikováno v:
PNAS 121 (45) e2321112121 (2024)
The relationship between the thermodynamic and computational characteristics of dynamical physical systems has been a major theoretical interest since at least the 19th century, and has been of increasing practical importance as the energetic cost of
Externí odkaz:
http://arxiv.org/abs/2311.17166
Autor:
Doty, David, Kornerup, Niels, Luchsinger, Austin, Orshansky, Leo, Soloveichik, David, Woods, Damien
The key factor currently limiting the advancement of computational power of electronic computation is no longer the manufacturing density and speed of components, but rather their high energy consumption. While it has been widely argued that reversib
Externí odkaz:
http://arxiv.org/abs/2309.06957
The field of chemical computation attempts to model computational behavior that arises when molecules, typically nucleic acids, are mixed together. Thermodynamic binding networks (TBNs) is a highly abstracted model that focuses on which molecules are
Externí odkaz:
http://arxiv.org/abs/2307.01550
Discrete chemical reaction networks formalize the interactions of molecular species in a well-mixed solution as stochastic events. Given their basic mathematical and physical role, the computational power of chemical reaction networks has been widely
Externí odkaz:
http://arxiv.org/abs/2307.01939
Autor:
Doty, David, Eftekhari, Mahsa
The population protocol model describes a network of anonymous agents that interact asynchronously in pairs chosen at random. Each agent starts in the same initial state $s$. We introduce the *dynamic size counting* problem: approximately counting th
Externí odkaz:
http://arxiv.org/abs/2202.12864
Autor:
HO-LIN CHEN1 holinchen@ntu.edu.tw, DOTY, DAVID2 doty@ucdavis.edu, REEVES, WYATT3 wreeves@math.harvard.edu, SOLOVEICHIK, DAVID4 david.soloveichik@utexas.edu
Publikováno v:
Journal of the ACM. Jun2023, Vol. 70 Issue 3, p1-61. 61p.
