Influenza A defective viral genome production is altered by metabolites, metabolic signaling molecules, and cyanobacteria extracts.

Autor: Agu I; Department of Microbiology and Molecular Genetics University of California, Davis One Shields Ave Davis CA 95616., José IR; Department of Microbiology and Molecular Genetics University of California, Davis One Shields Ave Davis CA 95616., Díaz-Muñoz SL; Department of Microbiology and Molecular Genetics University of California, Davis One Shields Ave Davis CA 95616.; Genome Center University of California, Davis One Shields Ave Davis CA 95616.

Publikováno v: BioRxiv : the preprint server for biology [bioRxiv] 2024 Jul 05. Date of Electronic Publication: 2024 Jul 05.

Open questions in the social lives of viruses.

Autor: Leeks A; Department of Ecology and Evolutionary Biology, Yale University, New Haven, Connecticut, USA.; Quantitative Biology Institute, Yale University, New Haven, Connecticut, USA., Bono LM; Department of Biological Sciences, Texas Tech University, Lubbock, Texas, USA., Ampolini EA; Department of Biochemistry & Molecular Biology, Medical University of South Carolina, Charleston, South Carolina, USA., Souza LS; Department of Ecology & Evolutionary Biology, University of Tennessee, Knoxville, Tennessee, USA., Höfler T; Institute of Virology, Freie Universität Berlin, Berlin, Germany., Mattson CL; Department of Microbiology and Molecular Genetics, University of California Davis, Davis, California, USA., Dye AE; Department of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina, USA., Díaz-Muñoz SL; Department of Microbiology and Molecular Genetics, University of California Davis, Davis, California, USA.; Genome Center, University of California Davis, Davis, California, USA.

Publikováno v: Journal of evolutionary biology [J Evol Biol] 2023 Nov; Vol. 36 (11), pp. 1551-1567.

Evaluating expert-based habitat suitability information of terrestrial mammals with GPS-tracking data.

Autor: Broekman MJE; Department of Environmental Science Institute for Wetland and Water Research, Faculty of Science, Radboud University Nijmegen The Netherlands., Hilbers JP; Department of Environmental Science Institute for Wetland and Water Research, Faculty of Science, Radboud University Nijmegen The Netherlands., Huijbregts MAJ; Department of Environmental Science Institute for Wetland and Water Research, Faculty of Science, Radboud University Nijmegen The Netherlands., Mueller T; Senckenberg Biodiversity and Climate Research Centre, Senckenberg Gesellschaft für Naturforschung Frankfurt (Main) Germany.; Department of Biological Sciences Goethe University Frankfurt (Main) Germany., Ali AH; Hirola Conservation Programme Garissa Kenya., Andrén H; Grimsö Wildlife Research Station, Department of Ecology Swedish University of Agricultural Sciences Riddarhyttan Sweden., Altmann J; Department of Ecology and Evolutionary Biology Princeton University Princeton New Jersey USA., Aronsson M; Grimsö Wildlife Research Station, Department of Ecology Swedish University of Agricultural Sciences Riddarhyttan Sweden.; Department of Zoology Stockholm University Stockholm Sweden., Attias N; Ecology and Conservation Graduate Program Federal University of Mato Grosso do Sul Campo Grande Mato Grosso do Sul Brazil.; Instituto de Conservação de Animais Silvestres (ICAS) Campo Grande Mato Grosso do Sul Brazil., Bartlam-Brooks HLA; Structure and Motion Lab Royal Veterinary College London UK., van Beest FM; Department of Bioscience Aarhus University Roskilde Denmark., Belant JL; Global Wildlife Conservation Center State University of New York College of Environmental Science and Forestry Syracuse New York USA., Beyer DE; Department of Fisheries and Wildlife Michigan State University East Lansing Michigan USA., Bidner L; Department of Anthropology University of California Davis California USA., Blaum N; Plant Ecology and Nature Conservation University of Potsdam Potsdam Germany., Boone RB; Department of Ecosystem Science and Sustainability Colorado State University Fort Collins Colorado USA., Boyce MS; Department of Biological Sciences University of Alberta Edmonton Alberta Canada., Brown MB; Giraffe Conservation Foundation Eros Namibia.; Conservation Ecology Center Smithsonian National Zoo and Conservation Biology Institute Front Royal Virginia USA., Cagnacci F; Department of Biodiversity and Molecular Ecology Research and Innovation Centre, Fondazione Edmund Mach Trento Italy., Černe R; Slovenia Forest Service Ljubljana Slovenia., Chamaillé-Jammes S; CEFE, Univ Montpellier, CNRS, EPHE, IRD, Univ Paul Valéry Montpellier 3 Montpellier France., Dejid N; Senckenberg Biodiversity and Climate Research Centre, Senckenberg Gesellschaft für Naturforschung Frankfurt (Main) Germany., Dekker J; Bionet Natuuronderzoek Stein Netherlands., L J Desbiez A; Instituto de Conservação de Animais Silvestres (ICAS) Campo Grande Mato Grosso do Sul Brazil.; IPÊ (Instituto de Pesquisas Ecológicas; Institute for Ecological Research) São Paulo Brazil.; Royal Zoological Society of Scotland (RZSS) Edinburgh UK., Díaz-Muñoz SL; Department of Microbiology and Molecular Genetics University of California Davis California USA., Fennessy J; Giraffe Conservation Foundation Eros Namibia., Fichtel C; German Primate Center, Behavioral Ecology and Sociobiology Unit Göttingen Germany., Fischer C; Faunistics and Wildlife Conservation, Department of Agriculture, Ecotrophology, and Landscape Development Anhalt University of Applied Sciences Bernburg Germany., Fisher JT; School of Environmental Studies University of Victoria Victoria British Columbia Canada., Fischhoff I; Cary Institute of Ecosystem Studies Millbrook New York USA., Ford AT; Department of Biology, Faculty of Science University of British Columbia Kelowna British Columbia Canada., Fryxell JM; Department of Integrative Biology University of Guelph Guelph Ontario Canada., Gehr B; Department of Evolutionary Biology and Environmental Studies University of Zurich Zurich Switzerland., Goheen JR; Department of Zoology and Physiology University of Wyoming Laramie Wyoming USA., Hauptfleisch M; Department of Agriculture And Natural Resources Sciences, Biodiversity Research Centre Namibia University of Science and Technology Windhoek Namibia., Hewison AJM; Université de Toulouse, INRAE, CEFS Castanet-Tolosan France.; LTSER ZA Pyrénées Garonne Auzeville-Tolosane France., Hering R; Plant Ecology and Nature Conservation University of Potsdam Potsdam Germany., Heurich M; Department of Conservation and Research Bavarian Forest National Park Grafenau Germany.; Chair of Wildlife Ecology and Management Albert Ludwigs University of Freiburg Freiburg Germany.; Department of Forestry and Wildlife Management Inland Norway University of Applied Sciences Koppang Norway., Isbell LA; Department of Anthropology University of California Davis California USA.; Animal Behavior Graduate Group University of California Davis California USA., Janssen R; Bionet Natuuronderzoek Stein Netherlands., Jeltsch F; Plant Ecology and Nature Conservation University of Potsdam Potsdam Germany., Kaczensky P; Department of Forestry and Wildlife Management Inland Norway University of Applied Sciences Koppang Norway.; Norwegian Institute for Nature Research Trondheim Norway.; Research Institute of Wildlife Ecology University of Veterinary Medicine Vienna Vienna Austria., Kappeler PM; German Primate Center, Behavioral Ecology and Sociobiology Unit Göttingen Germany., Krofel M; Department of Forestry and Renewable Forest Resources, Biotechnical Faculty University of Ljubljana Ljubljana Slovenia., LaPoint S; Black Rock Forest Cornwall New York USA.; Lamont-Doherty Earth Observatory Columbia University Palisades New York USA., Latham ADM; Department of Biological Sciences University of Alberta Edmonton Alberta Canada.; Wildlife Ecology and Management Manaaki Whenua - Landcare Research Lincoln New Zealand., Linnell JDC; Department of Forestry and Wildlife Management Inland Norway University of Applied Sciences Koppang Norway.; Norwegian Institute for Nature Research Trondheim Norway., Markham AC; Department of Anthropology Stony Brook University Stony Brook New York USA., Mattisson J; Norwegian Institute for Nature Research Trondheim Norway., Medici EP; IPÊ (Instituto de Pesquisas Ecológicas; Institute for Ecological Research) São Paulo Brazil.; International Union for Conservation of Nature (IUCN) Species Survival Commission (SSC) Tapir Specialist Group (TSG) Campo Grande Mato Grosso do Sul Brazil., de Miranda Mourão G; Embrapa Pantanal Corumbá Mato Grosso do Sul Brazil., Van Moorter B; Norwegian Institute for Nature Research Trondheim Norway., Morato RG; National Research Center for Carnivores Conservation Chico Mendes Institute for the Conservation of Biodiversity Atibaia Brazil., Morellet N; Université de Toulouse, INRAE, CEFS Castanet-Tolosan France.; LTSER ZA Pyrénées Garonne Auzeville-Tolosane France., Mysterud A; Centre for Ecological and Evolutionary Synthesis, Department of Biosciences University of Oslo Oslo Norway., Mwiu S; Wildlife Research and Training Institute Naivasha Kenya., Odden J; Norwegian Institute for Nature Research Oslo Norway., Olson KA; Wildlife Conservation Society, Mongolia Program Ulaanbaatar Mongolia., Ornicāns A; Latvian State Forest Research Institute 'Silava' Salaspils Latvia., Pagon N; Slovenia Forest Service Ljubljana Slovenia., Panzacchi M; Norwegian Institute for Nature Research Trondheim Norway., Persson J; Grimsö Wildlife Research Station, Department of Ecology Swedish University of Agricultural Sciences Riddarhyttan Sweden., Petroelje T; Global Wildlife Conservation Center State University of New York College of Environmental Science and Forestry Syracuse New York USA., Rolandsen CM; Norwegian Institute for Nature Research Trondheim Norway., Roshier D; Australian Wildlife Conservancy Subiaco Western Australia Australia., Rubenstein DI; Department of Ecology and Evolutionary Biology Princeton University Princeton New Jersey USA., Saïd S; Direction de la Recherche et de l'Appui Scientifique Office Français de la Biodiversité Birieux France., Salemgareyev AR; Association for the Conservation of Biodiversity of Kazakhstan (ACBK) Nur-Sultan Kazakhstan., Sawyer H; Western Ecosystems Technology Inc. Laramie Wyoming USA., Schmidt NM; Department of Bioscience Aarhus University Roskilde Denmark.; Arctic Research Centre Aarhus University Aarhus Denmark., Selva N; Institute of Nature Conservation Polish Academy of Sciences Krakow Poland., Sergiel A; Institute of Nature Conservation Polish Academy of Sciences Krakow Poland., Stabach J; Conservation Ecology Center Smithsonian National Zoo and Conservation Biology Institute Front Royal Virginia USA., Stacy-Dawes J; Conservation Science and Wildlife Health San Diego Zoo Wildlife Alliance Escondido California USA., Stewart FEC; School of Environmental Studies University of Victoria Victoria British Columbia Canada.; Department of Biology Wilfrid Laurier University Waterloo Ontario Canada., Stiegler J; Plant Ecology and Nature Conservation University of Potsdam Potsdam Germany., Strand O; Norwegian Institute for Nature Research Trondheim Norway., Sundaresan S; Greater Yellowstone Coalition Bozeman Montana USA., Svoboda NJ; Carnivore Ecology Laboratory, Forest and Wildlife Research Center Mississippi State University Mississippi State Mississippi USA.; Alaska Department of Fish and Game Kodiak Alaska USA., Ullmann W; Plant Ecology and Nature Conservation University of Potsdam Potsdam Germany., Voigt U; Institute for Terrestrial and Aquatic Wildlife Research University of Veterinary Medicine Hannover Foundation Hannover Germany., Wall J; Mara Elephant Project Nairobi Kenya., Wikelski M; Department of Migration Max Planck Institute of Animal Behavior Radolfzell Germany.; Centre for the Advanced Study of Collective Behaviour University of Konstanz Constance Germany., Wilmers CC; Center for Integrated Spatial Research, Environmental Studies Department University of California Santa Cruz California USA., Zięba F; Tatra National Park Zakopane Poland., Zwijacz-Kozica T; Tatra National Park Zakopane Poland., Schipper AM; Department of Environmental Science Institute for Wetland and Water Research, Faculty of Science, Radboud University Nijmegen The Netherlands.; PBL Netherlands Environmental Assessment Agency The Hague The Netherlands., Tucker MA; Department of Environmental Science Institute for Wetland and Water Research, Faculty of Science, Radboud University Nijmegen The Netherlands.

Publikováno v: Global ecology and biogeography : a journal of macroecology [Glob Ecol Biogeogr] 2022 Aug; Vol. 31 (8), pp. 1526-1541. Date of Electronic Publication: 2022 May 09.

SARS-CoV-2 detection and genomic sequencing from hospital surface samples collected at UC Davis.

Autor: Coil DA; Genome Center, University of California, Davis, California, United States of America., Albertson T; Division of Pulmonary, Critical Care and Sleep Medicine, Department of Internal Medicine, School of Medicine, University of California, Davis, California, United States of America., Banerjee S; Department of Medical Microbiology and Immunology, School of Medicine, University of California, Davis, California, United States of America., Brennan G; Department of Medical Microbiology and Immunology, School of Medicine, University of California, Davis, California, United States of America., Campbell AJ; Department of Microbiology and Molecular Genetics, College of Biological Sciences, University of California, Davis, California, United States of America., Cohen SH; Division of Infectious Diseases, Department of Internal Medicine, School of Medicine, University of California, Davis, California, United States of America., Dandekar S; Department of Medical Microbiology and Immunology, School of Medicine, University of California, Davis, California, United States of America., Díaz-Muñoz SL; Genome Center, University of California, Davis, California, United States of America.; Department of Microbiology and Molecular Genetics, College of Biological Sciences, University of California, Davis, California, United States of America., Eisen JA; Genome Center, University of California, Davis, California, United States of America.; Department of Medical Microbiology and Immunology, School of Medicine, University of California, Davis, California, United States of America.; Department of Evolution and Ecology, University of California, Davis, California, United States of America., Goldstein T; One Health Institute, University of California, Davis, California, United States of America., Jose IR; Department of Microbiology and Molecular Genetics, College of Biological Sciences, University of California, Davis, California, United States of America., Juarez M; Division of Pulmonary, Critical Care and Sleep Medicine, Department of Internal Medicine, School of Medicine, University of California, Davis, California, United States of America., Robinson BA; Division of Pulmonary, Critical Care and Sleep Medicine, Department of Internal Medicine, School of Medicine, University of California, Davis, California, United States of America., Rothenburg S; Department of Medical Microbiology and Immunology, School of Medicine, University of California, Davis, California, United States of America., Sandrock C; Division of Pulmonary, Critical Care and Sleep Medicine, Department of Internal Medicine, School of Medicine, University of California, Davis, California, United States of America., Stoian AMM; Department of Medical Microbiology and Immunology, School of Medicine, University of California, Davis, California, United States of America., Tompkins DG; Division of Pulmonary, Critical Care and Sleep Medicine, Department of Internal Medicine, School of Medicine, University of California, Davis, California, United States of America., Tremeau-Bravard A; One Health Institute, University of California, Davis, California, United States of America., Haczku A; Division of Pulmonary, Critical Care and Sleep Medicine, Department of Internal Medicine, School of Medicine, University of California, Davis, California, United States of America.

Publikováno v: PloS one [PLoS One] 2021 Jun 24; Vol. 16 (6), pp. e0253578. Date of Electronic Publication: 2021 Jun 24 (Print Publication: 2021).

Next-generation sequencing of dsRNA is greatly improved by treatment with the inexpensive denaturing reagent DMSO.

Autor: Wilcox AH; Department of Microbiology and Molecular Genetics, University of California, Davis, CA, USA., Delwart E; Department of Laboratory Medicine, University of California San Francisco, San Francisco, CA, USA.; Vitalant Research Institute, San Francisco, CA, USA., Díaz-Muñoz SL; Department of Microbiology and Molecular Genetics, University of California, Davis, CA, USA.; Genome Center, University of California, Davis, CA, USA.

Publikováno v: Microbial genomics [Microb Genom] 2019 Nov; Vol. 5 (11).