Gut Microbiome Wellness Index 2 enhances health status prediction from gut microbiome taxonomic profiles.

Autor: Chang D; Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, USA., Gupta VK; Microbiomics Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA., Hur B; Microbiomics Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA., Cobo-López S; Viral Information Institute, San Diego State University, San Diego, CA, USA., Cunningham KY; Bioinformatics and Computational Biology Program, University of Minnesota, Minneapolis, MN, USA., Han NS; Brain Korea 21 Center for Bio-Health Industry, Department of Food Science and Biotechnology, Chungbuk National University, Cheongju, South Korea., Lee I; Department of Biotechnology, Yonsei University, Seoul, South Korea., Kronzer VL; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, USA., Teigen LM; Department of Food Science and Nutrition, University of Minnesota, St. Paul, MN, USA., Karnatovskaia LV; Department of Pulmonary & Critical Care, Mayo Clinic, Rochester, MN, USA., Longbrake EE; Department of Neurology, Yale University, New Haven, CT, USA., Davis JM 3rd; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, USA., Nelson H; Emeritus, Department of Surgery, Mayo Clinic, Rochester, MN, USA., Sung J; Microbiomics Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA. Sung.Jaeyun@mayo.edu.; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, USA. Sung.Jaeyun@mayo.edu.; Division of Computational Biology, Department of Quantitative Health Sciences, Mayo Clinic, Rochester, MN, USA. Sung.Jaeyun@mayo.edu.

Publikováno v: Nature communications [Nat Commun] 2024 Aug 28; Vol. 15 (1), pp. 7447. Date of Electronic Publication: 2024 Aug 28.

Patients with ACPA-positive and ACPA-negative rheumatoid arthritis show different serological autoantibody repertoires and autoantibody associations with disease activity.

Autor: Cunningham KY; Bioinformatics and Computational Biology Program, University of Minnesota Twin Cities, Minneapolis, MN, 55455, USA., Hur B; Microbiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, 55905, USA.; Division of Surgery Research, Department of Surgery, Mayo Clinic, Rochester, MN, 55905, USA., Gupta VK; Microbiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, 55905, USA.; Division of Surgery Research, Department of Surgery, Mayo Clinic, Rochester, MN, 55905, USA., Arment CA; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA., Wright KA; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA., Mason TG; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA., Peterson LS; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA., Bekele DI; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA., Schaffer DE; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA., Bailey ML; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA., Delger KE; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA., Crowson CS; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA.; Department of Quantitative Health Sciences, Mayo Clinic, Rochester, MN, 55905, USA., Myasoedova E; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA.; Department of Quantitative Health Sciences, Mayo Clinic, Rochester, MN, 55905, USA., Zeng H; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA.; Department of Immunology, Mayo Clinic, Rochester, MN, 55905, USA., Rodriguez M; Department of Neurology, Mayo Clinic, Rochester, MN, 55905, USA., Weyand CM; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA.; Department of Immunology, Mayo Clinic, Rochester, MN, 55905, USA., Davis JM 3rd; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA., Sung J; Microbiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, 55905, USA. Sung.Jaeyun@mayo.edu.; Division of Surgery Research, Department of Surgery, Mayo Clinic, Rochester, MN, 55905, USA. Sung.Jaeyun@mayo.edu.; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905, USA. Sung.Jaeyun@mayo.edu.

Publikováno v: Scientific reports [Sci Rep] 2023 Apr 01; Vol. 13 (1), pp. 5360. Date of Electronic Publication: 2023 Apr 01.

Gut microbial determinants of clinically important improvement in patients with rheumatoid arthritis.

Autor: Gupta VK; Microbiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.; Division of Surgery Research, Department of Surgery, Mayo Clinic, Rochester, MN, USA., Cunningham KY; Bioinformatics and Computational Biology Program, University of Minnesota, Minneapolis, MN, USA., Hur B; Microbiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.; Division of Surgery Research, Department of Surgery, Mayo Clinic, Rochester, MN, USA., Bakshi U; Microbiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.; Division of Surgery Research, Department of Surgery, Mayo Clinic, Rochester, MN, USA., Huang H; Mayo Clinic Medical Scientist Training Program, Mayo Clinic, Rochester, MN, USA., Warrington KJ; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, USA., Taneja V; Department of Immunology, Mayo Clinic, Rochester, MN, USA., Myasoedova E; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, USA.; Department of Health Sciences Research, Division of Epidemiology, Mayo Clinic, Rochester, MN, USA., Davis JM 3rd; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, USA., Sung J; Microbiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA. Sung.Jaeyun@mayo.edu.; Division of Surgery Research, Department of Surgery, Mayo Clinic, Rochester, MN, USA. Sung.Jaeyun@mayo.edu.; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, USA. Sung.Jaeyun@mayo.edu.

Publikováno v: Genome medicine [Genome Med] 2021 Sep 14; Vol. 13 (1), pp. 149. Date of Electronic Publication: 2021 Sep 14.

Single-cell mass cytometry on peripheral blood identifies immune cell subsets associated with primary biliary cholangitis.

Autor: Jang JS; Medical Genome Facility, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.; Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA., Juran BD; Division of Gastroenterology and Hepatology, Department of Internal Medicine, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA., Cunningham KY; Graduate Research Education Program (GREP), Mayo Clinic, Rochester, MN, USA.; Department of Computer Science and Engineering, University of Minnesota Twin-Cities, Minneapolis, MN, USA., Gupta VK; Microbiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.; Division of Surgical Research, Department of Surgery, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA., Son YM; Division of Pulmonary and Critical Care Medicine, Department of Medicine, Mayo Clinic, Rochester, MN, USA.; Department of Immunology, Mayo Clinic, Rochester, MN, USA., Yang JD; Division of Digestive and Liver Diseases, Department of Medicine, Cedars Sinai Medical Center, Los Angeles, CA, USA., Ali AH; Division of Gastroenterology and Hepatology, Department of Internal Medicine, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA., Enninga EAL; Department of Immunology, Mayo Clinic, Rochester, MN, USA.; Department of Obstetrics and Gynecology, Mayo Clinic, Rochester, MN, USA., Sung J; Microbiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA. Sung.Jaeyun@mayo.edu.; Division of Surgical Research, Department of Surgery, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA. Sung.Jaeyun@mayo.edu.; Division of Rheumatology, Department of Medicine, Mayo Clinic, Rochester, MN, USA. Sung.Jaeyun@mayo.edu., Lazaridis KN; Division of Gastroenterology and Hepatology, Department of Internal Medicine, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA. Lazaridis.Konstantinos@mayo.edu.

Publikováno v: Scientific reports [Sci Rep] 2020 Jul 28; Vol. 10 (1), pp. 12584. Date of Electronic Publication: 2020 Jul 28.