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pro vyhledávání: '"Cunha, Julia Pinheiro Chagas Da"'
Autor:
Araujo, Christiane Bezerra De, Cunha, Julia Pinheiro Chagas Da, Davi Toshio Inada, Jeziel Damasceno, Lima, Alex Ranieri Jerônimo, Hiraiwa, Priscila, Marques, Catarina, Evonnildo Gonçalves, Nishiyama-Junior, Milton Yutaka, McCulloch, Richard, Elias, Maria Carolina
Additional file 2. Distribution of consensus replication origin regions located at DGF-1 genes according to their location at conserved (C- top) or disrupted (C-intermediate) T. cruzi genome domains (according to (43)). Both (B-below) represents DGF-
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e1eb7ad4144eaf74517ea2da26eda4f1
Autor:
Araujo, Christiane Bezerra De, Cunha, Julia Pinheiro Chagas Da, Davi Toshio Inada, Jeziel Damasceno, Lima, Alex Ranieri Jerônimo, Hiraiwa, Priscila, Marques, Catarina, Evonnildo Gonçalves, Nishiyama-Junior, Milton Yutaka, McCulloch, Richard, Elias, Maria Carolina
Additional file 5. Distribution of ORIs among DGF-1 genes. A. Scatter plot of DGF-1 genes distribution according their gene size (in bp). Total DGF-1 and DGF-1 containing replication origins were compared regarding their gene size. *P-value
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::300ace49447c3b6f0bcb0f717e872287
Autor:
Araujo, Christiane Bezerra De, Cunha, Julia Pinheiro Chagas Da, Davi Toshio Inada, Jeziel Damasceno, Lima, Alex Ranieri Jerônimo, Hiraiwa, Priscila, Marques, Catarina, Evonnildo Gonçalves, Nishiyama-Junior, Milton Yutaka, McCulloch, Richard, Elias, Maria Carolina
Additional file 1. Origins location related to genomic features of T. cruzi chromosomes. Chromosomes from S (upper panel) and P (lower panel) haplotypes are presented. Density peaks detected at the fold change strategy (a) and the consensus peaks (b)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6ba0dafce2659bcb8022b41cc6f887b7
Autor:
Araujo, Christiane Bezerra De, Cunha, Julia Pinheiro Chagas Da, Davi Toshio Inada, Jeziel Damasceno, Lima, Alex Ranieri Jerônimo, Hiraiwa, Priscila, Marques, Catarina, Evonnildo Gonçalves, Nishiyama-Junior, Milton Yutaka, McCulloch, Richard, Elias, Maria Carolina
Additional file 6. Percentage of genes (in base pairs) in T. cruzi genome. The percentage of indicated genes belonging to the multigene family is represented for Sand P haplotypes. Sizes of genes in base pairs were normalized to the genome size.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::417be9c2131584ac5ae9b12d4cbabf0f
Autor:
Araujo, Christiane Bezerra De, Cunha, Julia Pinheiro Chagas Da, Davi Toshio Inada, Jeziel Damasceno, Lima, Alex Ranieri Jerônimo, Hiraiwa, Priscila, Marques, Catarina, Evonnildo Gonçalves, Nishiyama-Junior, Milton Yutaka, McCulloch, Richard, Elias, Maria Carolina
Additional file 4. Schematic representation of a T. cruzi genomic region. CDSs are represented in green or purple vertical lines. Clusters of CDSs that are transcribed in the same direction represent a DGC. Arrows indicate the orientation of transcri
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3387bc4170df6c2a634741caeb4b2aa6
Autor:
Araujo, Christiane Bezerra De, Cunha, Julia Pinheiro Chagas Da, Davi Toshio Inada, Jeziel Damasceno, Lima, Alex Ranieri Jerônimo, Hiraiwa, Priscila, Marques, Catarina, Evonnildo Gonçalves, Nishiyama-Junior, Milton Yutaka, McCulloch, Richard, Elias, Maria Carolina
Additional file 7. Transcription orientation along chromosomes. Overall gene density and transcription orientation along each chromosome in S haplotype (A) and P haplotype (−) Genes transcribed in the negative strand; (+) genes transcribed in the p
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::044cf84cab7573cfc42ea239a0cc024e
Autor:
Araujo, Christiane Bezerra De, Cunha, Julia Pinheiro Chagas Da, Davi Toshio Inada, Jeziel Damasceno, Lima, Alex Ranieri Jerônimo, Hiraiwa, Priscila, Marques, Catarina, Evonnildo Gonçalves, Nishiyama-Junior, Milton Yutaka, McCulloch, Richard, Elias, Maria Carolina
Additional file 3. Analysis of ORIs found at both R1 and R2 replicates. A. Consensus origin regions from replicates 1 (R1) and 2 (R2) were considered overlaped if they share at least one nucleotide. 60% (15/25) and 27% (3/11) of overlapped origins we
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b866ece0b34d0c22b3da0830efd8b18b
Autor:
Sidoli, Simone, Kori, Yekaterina, Lopes, Mariana, Yuan, Zuo-Fei, Kim, Hee Jong, Kulej, Katarzyna, Janssen, Kevin A., Agosto, Laura M., Cunha, Julia Pinheiro Chagas da, Andrews, Andrew J., Garcia, Benjamin A.
Publikováno v:
Genome Research; 2019, Vol. 29 Issue: 6 p978-987, 10p
