Assessing the complementary information from an increased number of biologically relevant features in liquid biopsy-derived RNA-Seq data

Autor: Stavros Giannoukakos, Silvia D'Ambrosi, Danijela Koppers-Lalic, Cristina Gómez-Martín, Alberto Fernandez, Michael Hackenberg

Publikováno v: Heliyon, Vol 10, Iss 6, Pp e27360- (2024)

Liquid biopsy-derived RNA sequencing (lbRNA-seq) exhibits significant promise for clinic-oriented cancer diagnostics due to its non-invasiveness and ease of repeatability. Despite substantial advancements, obstacles like technical artefacts and proce

Externí odkaz: https://doaj.org/article/153e3103597048f196f34257b9113a5d

Transcriptomic analysis of the tick midgut and salivary gland responses upon repeated blood-feeding on a vertebrate host

Autor: José María Medina, Mohamed Amine Jmel, Brent Cuveele, Cristina Gómez-Martín, Ernesto Aparicio-Puerta, Imen Mekki, Jan Kotál, Larissa Almeida Martins, Michael Hackenberg, Chaima Bensaoud, Michail Kotsyfakis

Publikováno v: Frontiers in Cellular and Infection Microbiology, Vol 12 (2022)

Ticks are blood-feeding arthropods that use the components of their salivary glands to counter the host’s hemostatic, inflammatory, and immune responses. The tick midgut also plays a crucial role in hematophagy. It is responsible for managing blood

Externí odkaz: https://doaj.org/article/17ae4b4aacc142e19e1b26054b57edae

Decoding Gene Expression Signatures Underlying Vegetative to Inflorescence Meristem Transition in the Common Bean

Autor: Ana M. González, Ricardo Lebrón, Fernando J. Yuste-Lisbona, Cristina Gómez-Martín, Ana Ortiz-Atienza, Michael Hackenberg, José L. Oliver, Rafael Lozano, Marta Santalla

Publikováno v: International Journal of Molecular Sciences, Vol 23, Iss 23, p 14783 (2022)

The tropical common bean (Phaseolus vulgaris L.) is an obligatory short-day plant that requires relaxation of the photoperiod to induce flowering. Similar to other crops, photoperiod-induced floral initiation depends on the differentiation and mainte

Externí odkaz: https://doaj.org/article/55c48853c3fc484e8bd07eaf30a7d80b

HSV-1 miRNAs are posttranscriptionaly edited in latently infected human ganglia

Autor: Andreja Zubković, Cristina Gómez-Martín, Adwait Anand Parchure, Mia Cesarec, Antun Ferenčić, Filip Rokić, Hrvoje Jakovac, Abigail L Whitford, Sara A Dochnal, Anna R. Cliffe, Dražen Cuculić, Angela Gallo, Oliver Vugrek, MIchael Hackenberg, Igor Jurak

Viruses use miRNAs to enable efficient replication, control host defense mechanisms, and regulate latent infection. Herpes simplex virus 1 (HSV-1) expresses multiple miRNAs, whose functions are largely unknown. The evolutionary conservation of many H

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::fbdfd163c4349a09a32519ad9b086fa9
https://doi.org/10.1101/2023.05.26.542484

Comprehensive, integrative genomic analysis of microRNA expression profiles in different tissues of two wheat cultivars with different traits

Autor: Cristina, Gómez-Martín, Hui, Zhou, José Maria, Medina, Ernesto, Aparicio-Puerta, Michael, Hackenberg, Bujun, Shi

Publikováno v: Functional and Integrative Genomics, 23(1):15. Springer Verlag
Gómez-Martín, C, Zhou, H, Medina, J M, Aparicio-Puerta, E, Hackenberg, M & Shi, B 2023, ' Comprehensive, integrative genomic analysis of microRNA expression profiles in different tissues of two wheat cultivars with different traits ', Functional and Integrative Genomics, vol. 23, no. 1, 15 . https://doi.org/10.1007/s10142-022-00920-1

Wheat is one of the most important food sources on Earth. MicroRNAs (miRNA) play important roles in wheat productivity. To identify wheat miRNAs, we constructed and sequenced sRNA libraries from leaves and roots of two wheat cultivars (RAC875 and Kuk

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d7c3e4ac6b09cfafed71f3becabe5d98
https://doi.org/10.1007/s10142-022-00920-1