Zobrazeno 1 - 10
of 46
pro vyhledávání: '"Cristal Zuñiga"'
Autor:
Mónica Fabiola Briones-Báez, Luciano Aguilera-Vázquez, Nelson Rangel-Valdez, Cristal Zuñiga, Ana Lidia Martínez-Salazar, Claudia Gomez-Santillan
Publikováno v:
Algorithms, Vol 17, Iss 8, p 336 (2024)
Flux Balance Analysis (FBA) is a constraint-based method that is commonly used to guide metabolites through restricting pathways that often involve conditions such as anaplerotic cycles like Calvin, reversible or irreversible reactions, and nodes whe
Externí odkaz:
https://doaj.org/article/4dacfc521c6f47d2919d7028fdb6f3d8
Publikováno v:
Frontiers in Systems Biology, Vol 4 (2024)
Members of the genus Methylacidiphilum are thermoacidophile methanotrophs with optimal growth temperatures between 50°C and 60°C, and pH between 1.0 and 3.0. These microorganisms, as well as other extremophile bacteria, offer an attractive platform
Externí odkaz:
https://doaj.org/article/7046e504167d47beaf994110b84e6e6c
Autor:
Juan D. Tibocha-Bonilla, Cristal Zuñiga, Asama Lekbua, Colton Lloyd, Kevin Rychel, Katie Short, Karsten Zengler
Publikováno v:
npj Systems Biology and Applications, Vol 8, Iss 1, Pp 1-12 (2022)
Abstract Bacillus subtilis is a well-characterized microorganism and a model for the study of Gram-positive bacteria. The bacterium can produce proteins at high densities and yields, which has made it valuable for industrial bioproduction. Like other
Externí odkaz:
https://doaj.org/article/66bae66e8d24405387d8acba0caea2aa
Autor:
Diego Tec-Campos, Camila Posadas, Juan D Tibocha-Bonilla, Deepan Thiruppathy, Nathan Glonek, Cristal Zuñiga, Alejandro Zepeda, Karsten Zengler
Publikováno v:
PLoS Computational Biology, Vol 19, Iss 8, p e1011371 (2023)
The purple non-sulfur bacterium Rhodopseudomonas palustris is recognized as a critical microorganism in the nitrogen and carbon cycle and one of the most common members in wastewater treatment communities. This bacterium is metabolically extremely ve
Externí odkaz:
https://doaj.org/article/44445c019fd54c239c6288d340b88ca4
Autor:
Cristal Zuñiga, Tingting Li, Michael T. Guarnieri, Jackson P. Jenkins, Chien-Ting Li, Kerem Bingol, Young-Mo Kim, Michael J. Betenbaugh, Karsten Zengler
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-13 (2020)
Successful application of microbial community for bioproduction relies on the selection of appropriate heterotroph and phototroph partners. Here, the authors construct community metabolic models to guide strain selection and experimentally validate m
Externí odkaz:
https://doaj.org/article/064f3d9969f3489aac27c15e3982f2de
Autor:
Gabriela Canto-Encalada, Diego Tec-Campos, Juan D Tibocha-Bonilla, Karsten Zengler, Alejandro Zepeda, Cristal Zuñiga
Publikováno v:
PLoS Computational Biology, Vol 18, Iss 2, p e1009828 (2022)
The ammonia-oxidizing bacterium Nitrosomonas europaea has been widely recognized as an important player in the nitrogen cycle as well as one of the most abundant members in microbial communities for the treatment of industrial or sewage wastewater. I
Externí odkaz:
https://doaj.org/article/f11b1f6d8fee4d7aa0a59a9fca1f8531
Autor:
Monica Fabiola Briones-Baez, Luciano Aguilera-Vazquez, Nelson Rangel-Valdez, Ana Lidia Martinez-Salazar, Cristal Zuñiga
Publikováno v:
Metabolites, Vol 12, Iss 7, p 603 (2022)
Studies enabled by metabolic models of different species of microalgae have become significant since they allow us to understand changes in their metabolism and physiological stages. The most used method to study cell metabolism is FBA, which commonl
Externí odkaz:
https://doaj.org/article/aad9978727b14afca87e8558ee0e2992
Autor:
Diego Tec Campos, Cristal Zuñiga, Anurag Passi, John Del Toro, Juan D. Tibocha-Bonilla, Alejandro Zepeda, Michael J. Betenbaugh, Karsten Zengler
Publikováno v:
Metabolic Engineering Communications, Vol 11, Iss , Pp e00132- (2020)
Nitrogen fixation is an important metabolic process carried out by microorganisms, which converts molecular nitrogen into inorganic nitrogenous compounds such as ammonia (NH3). These nitrogenous compounds are crucial for biogeochemical cycles and for
Externí odkaz:
https://doaj.org/article/d92f430e3d39474c9c58c8f32421bc74
Publikováno v:
Biotechnology for Biofuels, Vol 11, Iss 1, Pp 1-15 (2018)
Abstract Production of biofuels and bioenergy precursors by phototrophic microorganisms, such as microalgae and cyanobacteria, is a promising alternative to conventional fuels obtained from non-renewable resources. Several species of microalgae have
Externí odkaz:
https://doaj.org/article/413556feff8a4151b19946df29755e18
Publikováno v:
Microbial Biotechnology, Vol 10, Iss 6, Pp 1500-1522 (2017)
Summary Microorganisms engage in complex interactions with other members of the microbial community, higher organisms as well as their environment. However, determining the exact nature of these interactions can be challenging due to the large number
Externí odkaz:
https://doaj.org/article/f07b4aa961c6444da82dd9d6fba93f6e