Deep learning-based method for segmenting epithelial layer of tubules in histopathological images of testicular tissue

Autor: Azadeh Fakhrzadeh, Pouya Karimian, Mahsa Meyari, Cris L. Luengo Hendriks, Lena Holm, Christian Sonne, Rune Dietz, Ellinor Spörndly-Nees

Publikováno v: Fakhrzadeh, A, Karimian, P, Meyari, M, Hendriks, C L L, Holm, L, Sonne, C, Dietz, R & Spörndly-Nees, E 2023 ' Deep learning-based method for segmenting epithelial layer of tubules in histopathological images of testicular tissue ' SPIE. Digital Library .
J Med Imaging (Bellingham)

There is growing concern that male reproduction is affected by environmental chemicals. One way to determine the adverse effect of environmental pollutants is to use wild animals as monitors and evaluate testicular toxicity using histopathology. Auto

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3a7ccad39d80360f8e8208b7054db17c
https://doi.org/10.1117/1.jmi.10.3.037501

Preconditioning 2D Integer Data for Fast Convex Hull Computations.

Autor: José Oswaldo Cadenas, Graham M Megson, Cris L Luengo Hendriks

Publikováno v: PLoS ONE, Vol 11, Iss 3, p e0149860 (2016)

In order to accelerate computing the convex hull on a set of n points, a heuristic procedure is often applied to reduce the number of points to a set of s points, s ≤ n, which also contains the same hull. We present an algorithm to precondition 2D

Externí odkaz: https://doaj.org/article/81d217d0264e49a3ad9d716bb07097ff

Effect of pre-fixation delay and freezing on mink testicular endpoints for environmental research.

Autor: Ellinor Spörndly-Nees, Elisabeth Ekstedt, Ulf Magnusson, Azadeh Fakhrzadeh, Cris L Luengo Hendriks, Lena Holm

Publikováno v: PLoS ONE, Vol 10, Iss 5, p e0125139 (2015)

There is growing interest in using wild animals to monitor the real-life cocktail effect of environmental chemicals on male reproduction. However, practical difficulties, such as long distances to the laboratory, generally prolong the time between eu

Externí odkaz: https://doaj.org/article/2b529c0c4d4145238d19e222ff09d6ff

Mathematical Morphology on Irregularly Sampled Data in One Dimension

Autor: Cris L. Luengo Hendriks, Matthew J. Thurley, Teo Asplund, Robin Strand

Publikováno v: Mathematical Morphology, Vol 2, Iss 1, Pp 1-24 (2017)

Mathematical morphology (MM) on grayscale images is commonly performed in the discrete domain on regularly sampled data. However, if the intention is to characterize or quantify continuous-domain objects, then the discrete-domain morphology is affect

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::10e86869e592b57ded804b93864c8298
https://doaj.org/article/aaf6ad09d282465d90cb7eb0f9f3b39f

Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm.

Autor: Xiao-yong Li, Stewart MacArthur, Richard Bourgon, David Nix, Daniel A Pollard, Venky N Iyer, Aaron Hechmer, Lisa Simirenko, Mark Stapleton, Cris L Luengo Hendriks, Hou Cheng Chu, Nobuo Ogawa, William Inwood, Victor Sementchenko, Amy Beaton, Richard Weiszmann, Susan E Celniker, David W Knowles, Tom Gingeras, Terence P Speed, Michael B Eisen, Mark D Biggin

Publikováno v: PLoS Biology, Vol 6, Iss 2, p e27 (2008)

Identifying the genomic regions bound by sequence-specific regulatory factors is central both to deciphering the complex DNA cis-regulatory code that controls transcription in metazoans and to determining the range of genes that shape animal morphoge

Externí odkaz: https://doaj.org/article/1c0cb54e3f884aad8d2824668852d428