Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics.

Autor: Grones C; Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent 9052, Belgium.; VIB Centre for Plant Systems Biology, Ghent 9052, Belgium., Eekhout T; Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent 9052, Belgium.; VIB Centre for Plant Systems Biology, Ghent 9052, Belgium.; VIB Single Cell Core Facility, Ghent 9052, Belgium., Shi D; Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany.; Institute of Biochemistry and Biology, University of Potsdam, 14476 Potsdam, Germany., Neumann M; Institute of Biology, Humboldt-Universität zu Berlin, 10115 Berlin, Germany., Berg LS; Institute of Plant Sciences, University of Bern, 3012 Bern, Switzerland., Ke Y; Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent 9052, Belgium.; VIB Centre for Plant Systems Biology, Ghent 9052, Belgium., Shahan R; Department of Biology, Duke University, Durham, NC 27708, USA.; Howard Hughes Medical Institute, Duke University, Durham, NC 27708, USA., Cox KL Jr; Donald Danforth Plant Science Center, St. Louis, MO 63132, USA., Gomez-Cano F; Department of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, MI 48109, USA., Nelissen H; Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent 9052, Belgium.; VIB Centre for Plant Systems Biology, Ghent 9052, Belgium., Lohmann JU; Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany., Giacomello S; SciLifeLab, Department of Gene Technology, KTH Royal Institute of Technology, 17165 Solna, Sweden., Martin OC; Universities of Paris-Saclay, Paris-Cité and Evry, CNRS, INRAE, Institute of Plant Sciences Paris-Saclay, Gif-sur-Yvette 91192, France., Cole B; DOE-Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA., Wang JW; National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences (CEMPS), Institute of Plant Physiology and Ecology (SIPPE), Chinese Academy of Sciences (CAS), Shanghai 200032, China., Kaufmann K; Institute of Biology, Humboldt-Universität zu Berlin, 10115 Berlin, Germany., Raissig MT; Institute of Plant Sciences, University of Bern, 3012 Bern, Switzerland., Palfalvi G; Department of Comparative Development and Genetics, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany., Greb T; Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany., Libault M; Division of Plant Science and Technology, Interdisciplinary Plant Group, College of Agriculture, Food, and Natural Resources, University of Missouri-Columbia, Columbia, MO 65201, USA., De Rybel B; Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent 9052, Belgium.; VIB Centre for Plant Systems Biology, Ghent 9052, Belgium.

Publikováno v: The Plant cell [Plant Cell] 2024 Mar 29; Vol. 36 (4), pp. 812-828.

Organizing your space: The potential for integrating spatial transcriptomics and 3D imaging data in plants.

Autor: Cox KL Jr; Donald Danforth Plant Science Center, St. Louis, Missouri 63132, USA.; Howard Hughes Medical Institute, Chevy Chase, Maryland 20815, USA., Gurazada SGR; Donald Danforth Plant Science Center, St. Louis, Missouri 63132, USA.; Delaware Biotechnology Institute, University of Delaware, Newark, Delaware 19711, USA., Duncan KE; Donald Danforth Plant Science Center, St. Louis, Missouri 63132, USA., Czymmek KJ; Donald Danforth Plant Science Center, St. Louis, Missouri 63132, USA.; Advanced Bioimaging Laboratory, Donald Danforth Plant Science Center, St Louis, Missouri 63132, USA., Topp CN; Donald Danforth Plant Science Center, St. Louis, Missouri 63132, USA., Meyers BC; Donald Danforth Plant Science Center, St. Louis, Missouri 63132, USA.; Division of Plant Sciences and Technology, University of Missouri-Columbia, Columbia, MO 65211, USA.

Publikováno v: Plant physiology [Plant Physiol] 2022 Feb 04; Vol. 188 (2), pp. 703-712.

Return of old foes - recurrence of bacterial blight and Fusarium wilt of cotton.

Autor: Cox KL Jr; Department of Plant Pathology and Microbiology, Texas A&M University, College Station, TX 77843, USA; Institute for Plant Genomics and Biotechnology, AgriLife Research, Texas A&M University, College Station, TX 77843, USA., Babilonia K; Institute for Plant Genomics and Biotechnology, AgriLife Research, Texas A&M University, College Station, TX 77843, USA; Molecular and Environmental Plant Sciences, Texas A&M University, College Station, TX 77843, USA; Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA., Wheeler T; Department of Plant Pathology and Microbiology, Texas A&M University, College Station, TX 77843, USA; Texas A&M AgriLife Research, Lubbock, TX 79403, USA., He P; Institute for Plant Genomics and Biotechnology, AgriLife Research, Texas A&M University, College Station, TX 77843, USA; Molecular and Environmental Plant Sciences, Texas A&M University, College Station, TX 77843, USA; Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA., Shan L; Department of Plant Pathology and Microbiology, Texas A&M University, College Station, TX 77843, USA; Institute for Plant Genomics and Biotechnology, AgriLife Research, Texas A&M University, College Station, TX 77843, USA; Molecular and Environmental Plant Sciences, Texas A&M University, College Station, TX 77843, USA. Electronic address: lshan@tamu.edu.

Publikováno v: Current opinion in plant biology [Curr Opin Plant Biol] 2019 Aug; Vol. 50, pp. 95-103. Date of Electronic Publication: 2019 May 07.

Highly specific gene silencing in a monocot species by artificial microRNAs derived from chimeric miRNA precursors.

Autor: Carbonell A; Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA., Fahlgren N; Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA., Mitchell S; Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA., Cox KL Jr; Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA., Reilly KC; Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA., Mockler TC; Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA., Carrington JC; Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA.

Publikováno v: The Plant journal : for cell and molecular biology [Plant J] 2015 Jun; Vol. 82 (6), pp. 1061-1075. Date of Electronic Publication: 2015 May 20.