Zobrazeno 1 - 10 of 34 pro vyhledávání: '"Colquhoun, Rachel M."'
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Akademický článek
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4
CLIMB-COVID: continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance
Autor: Nicholls, Samuel M., Poplawski, Radoslaw, Bull, Matthew J., Underwood, Anthony, Chapman, Michael, Abu-Dahab, Khalil, Taylor, Ben, Colquhoun, Rachel M., Rowe, Will P. M., Jackson, Ben, Hill, Verity, O’Toole, Áine, Rey, Sara, Southgate, Joel, Amato, Roberto, Livett, Rich, Gonçalves, Sónia, Harrison, Ewan M., Peacock, Sharon J., Aanensen, David M., Rambaut, Andrew, Connor, Thomas R., Loman, Nicholas J., The COVID-19 Genomics UK (COG-UK) Consortium, Bashton, Matthew, Smith, Darren, Nelson, Andrew, Young, Greg, McCann, Clare
Publikováno v: Nicholls, S M, Poplawski, R, Bull, M J, Underwood, A, Chapman, M, Abu-Dahab, K, Taylor, B, Colquhoun, R M, Rowe, W P M, Jackson, B, Hill, V, O’Toole, Á, Rey, S, Southgate, J, Amato, R, Livett, R, Gonçalves, S, Harrison, E M, Peacock, S J, Aanensen, D M, Rambaut, A, Connor, T R & Loman, N J 2021, ' CLIMB-COVID : Continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance ', Genome Biology, vol. 22, no. 196 . https://doi.org/10.1186/s13059-021-02395-y
Genome Biology
Genome Biology, Vol 22, Iss 1, Pp 1-21 (2021)
In response to the ongoing SARS-CoV-2 pandemic in the UK, the COVID-19 Genomics UK (COG-UK) consortium was formed to rapidly sequence SARS-CoV-2 genomes as part of a national-scale genomic surveillance strategy. The network consists of universities,
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::57e430a6149556c94a064f8905e798af
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5
Generation and transmission of interlineage recombinants in the SARS-CoV-2 pandemic
Autor: Jackson, Ben, Boni, Maciej F., Bull, Matthew J., Colleran, Amy, Colquhoun, Rachel M., Darby, Alistair C., Haldenby, Sam, Hill, Verity, Lucaci, Anita, McCrone, John T., Nicholls, Samuel M., O’Toole, Áine, Pacchiarini, Nicole, Poplawski, Radoslaw, Scher, Emily, Todd, Flora, Webster, Hermione J., Whitehead, Mark, Wierzbicki, Claudia, Loman, Nicholas J., Connor, Thomas R., Robertson, David L., Pybus, Oliver G., Rambaut, Andrew, The COVID-19 Genomics UK (COG-UK) Consortium, Bashton, Matthew, Smith, Darren, Nelson, Andrew, Young, Greg, McCann, Clare
Publikováno v: Jackson, B, Boni, M F, Bull, M J, Colleran, A, Colquhoun, R M, Darby, A C, Haldenby, S, Hill, V, Lucaci, A, McCrone, J T, Nicholls, S M, O'Toole, Á, Pacchiarini, N, Poplawski, R, Scher, E, Todd, F, Webster, H J, Whitehead, M, Wierzbicki, C, Loman, N J, Connor, T R, Robertson, D L, Pybus, O G & Rambaut, A 2021, ' Generation and transmission of interlineage recombinants in the SARS-CoV-2 pandemic ', Cell, vol. 184, no. 20, pp. 5179-5188.e8 . https://doi.org/10.1016/j.cell.2021.08.014
Cell
We present evidence for multiple independent origins of recombinant SARS-CoV-2 viruses sampled from late 2020 and early 2021 in the United Kingdom. Their genomes carry single-nucleotide polymorphisms and deletions that are characteristic of the B.1.1
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8bf6b179d976cf19332c3573b81d92d8
https://pubmed.ncbi.nlm.nih.gov/34499854
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Akademický článek
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7
Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity
Autor: Thomson, Emma C, Rosen, Laura E, Shepherd, James G, Spreafico, Roberto, da Silva Filipe, Ana, Wojcechowskyj, Jason A, Davis, Chris, Piccoli, Luca, Pascall, David J, Dillen, Josh, Lytras, Spyros, Czudnochowski, Nadine, Shah, Rajiv, Meury, Marcel, Jesudason, Natasha, De Marco, Anna, Li, Kathy, Bassi, Jessica, O'Toole, Aine, Pinto, Dora, Colquhoun, Rachel M, Culap, Katja, Jackson, Ben, Zatta, Fabrizia, Rambaut, Andrew, Jaconi, Stefano, Sreenu, Vattipally B, Nix, Jay, Zhang, Ivy, Jarrett, Ruth F, Glass, William G, Beltramello, Martina, Nomikou, Kyriaki, Pizzuto, Matteo, Tong, Lily, Cameroni, Elisabetta, Croll, Tristan I, Johnson, Natasha, Di Iulio, Julia, Wickenhagen, Arthur, Ceschi, Alessandro, Harbison, Aoife M, Mair, Daniel, Ferrari, Paolo, Smollett, Katherine, Sallusto, Federica, Carmichael, Stephen, Garzoni, Christian, Nichols, Jenna, Galli, Massimo, Hughes, Joseph, Riva, Agostino, Ho, Antonia, Schiuma, Marco, Semple, Malcolm G, Openshaw, Peter JM, Fadda, Elisa, Baillie, J Kenneth, Chodera, John D, Rihn, Suzannah J, Lycett, Samantha J, Virgin, Herbert W, Telenti, Amalio, Corti, Davide, Robertson, David L, Snell, Gyorgy, ISARIC4C Investigators, COVID-19 Genomics UK (COG-UK) Consortium
Publikováno v: Cell, vol 184, iss 5
SARS-CoV-2 can mutate and evade immunity, with consequences for efficacy of emerging vaccines and antibody therapeutics. Here, we demonstrate that the immunodominant SARS-CoV-2 spike (S) receptor binding motif (RBM) is a highly variable region of S a
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::abd29de2d3e850b5539d4f7c26026952
https://escholarship.org/uc/item/09z3r8fn
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8
Epidemic waves of COVID-19 in Scotland: a genomic perspective on the impact of the introduction and relaxation of lockdown on SARS-CoV-2
Autor: Lycett, Samantha J, Hughes, Joseph, McHugh, Martin P, Filipe, Ana da Silva, Dewar, Rebecca, Lu, Lu, Doherty, Thomas, Shepherd, Amy, Inward, Rhys, Rossi, Gianluigi, Balaz, Daniel, Kao, Rowland R, Rooke, Stefan, Cotton, Seb, Gallagher, Michael D, Lopez, Carlos Balcazar, O’Toole, Áine, Scher, Emily, Hill, Verity, McCrone, John T, Colquhoun, Rachel M, Jackson, Ben, Williams, Thomas C, Williamson, Kathleen A, Johnson, Natasha, Smollett, Katherine, Mair, Daniel, Carmichael, Stephen, Tong, Lily, Nichols, Jenna, Brunker, Kirstyn, Shepherd, James G, Li, Kathy, Aranday-Cortes, Elihu, Parr, Yasmin A, Broos, Alice, Nomikou, Kyriaki, McDonald, Sarah E, Niebel, Marc, Asamaphan, Patawee, Starinskij, Igor, Jesudason, Natasha, Shah, Rajiv, Sreenu, Vattipally B, Stanton, Tom, Shaaban, Sharif, MacLean, Alasdair, Woolhouse, Mark, Gunson, Rory, Templeton, Kate, Thomson, Emma C, Rambaut, Andrew, Holden, Matthew T.G., Robertson, David L
Publikováno v: Lycett, S J, Hughes, J, McHugh, M P, Filipe, A D S, Dewar, R, Lu, L, Doherty, T, Shepherd, A, Inward, R, Rossi, G, Balaz, D, Kao, R R, Rooke, S, Cotton, S, Gallagher, M D, Lopez, C B, O’Toole, Á, Scher, E, Hill, V, McCrone, J T, Colquhoun, R M, Jackson, B, Williams, T C, Williamson, K A, Johnson, N, Smollett, K, Mair, D, Carmichael, S, Tong, L, Nichols, J, Brunker, K, Shepherd, J G, Li, K, Aranday-Cortes, E, Parr, Y A, Broos, A, Nomikou, K, McDonald, S E, Niebel, M, Asamaphan, P, Starinskij, I, Jesudason, N, Shah, R, Sreenu, V B, Stanton, T, Shaaban, S, MacLean, A, Woolhouse, M, Gunson, R, Templeton, K, Thomson, E C, Rambaut, A, Holden, M T G & Robertson, D L 2021 ' Epidemic waves of COVID-19 in Scotland: a genomic perspective on the impact of the introduction and relaxation of lockdown on SARS-CoV-2 ' Cold Spring Harbor Laboratory Press . https://doi.org/10.1101/2021.01.08.20248677, https://doi.org/10.1101/2021.01.08.20248677
The second SARS virus, SARS-CoV-2, emerged in December 2019, and within a month was globally distributed. It was first introduced into Scotland in February 2020 associated with returning travellers and visitors. By March it was circulating in communi
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od______3094::9a819325fbc44afdc983050d24ce1f8b
https://www.pure.ed.ac.uk/ws/files/199501738/2021.01.08.20248677v1.full.pdf
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